RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 LRRIQ1Q96JM4 1722 aa11.45□□□□□ -0.58
LIN7A-202ENST00000549417 SYCP2Q9BX26 1530 aa11.45□□□□□ -0.58
LIN7A-202ENST00000549417 TNRQ92752 1358 aa11.44□□□□□ -0.58
LIN7A-202ENST00000549417 PLXNC1O60486 1568 aa11.44□□□□□ -0.58
LIN7A-202ENST00000549417 A2MP01023 1474 aa11.44□□□□□ -0.58
LIN7A-202ENST00000549417 CDC42BPAQ5VT25 1732 aa11.43□□□□□ -0.58
LIN7A-202ENST00000549417 UPF1Q92900 1129 aaKnown RBP eCLIP11.43□□□□□ -0.58
LIN7A-202ENST00000549417 ATP7AQ04656 1500 aa11.43□□□□□ -0.58
LIN7A-202ENST00000549417 IQGAP1P46940 1657 aa11.43□□□□□ -0.58
LIN7A-202ENST00000549417 FMN1Q68DA7 1419 aa11.42□□□□□ -0.58
LIN7A-202ENST00000549417 SYNMO15061 1565 aa11.41□□□□□ -0.58
LIN7A-202ENST00000549417 THEMISQ8N1K5 641 aaPredicted RBP11.4□□□□□ -0.58
LIN7A-202ENST00000549417 MED14O60244 1454 aa11.39□□□□□ -0.59
LIN7A-202ENST00000549417 DEPDC5O75140 1603 aa11.39□□□□□ -0.59
LIN7A-202ENST00000549417 TRIM52Q96A61 297 aa11.39□□□□□ -0.59
LIN7A-202ENST00000549417 INO80Q9ULG1 1556 aaPredicted RBP11.39□□□□□ -0.59
LIN7A-202ENST00000549417 UGGT1Q9NYU2 1555 aa11.38□□□□□ -0.59
LIN7A-202ENST00000549417 XIRP1Q702N8 1843 aaKnown RBP11.37□□□□□ -0.59
LIN7A-202ENST00000549417 FAM135AQ9P2D6 1515 aa11.37□□□□□ -0.59
LIN7A-202ENST00000549417 ARHGAP35Q9NRY4 1499 aa11.37□□□□□ -0.59
LIN7A-202ENST00000549417 PZPP20742 1482 aa11.35□□□□□ -0.59
LIN7A-202ENST00000549417 ADGBQ8N7X0 1667 aa11.35□□□□□ -0.59
LIN7A-202ENST00000549417 MIA2Q96PC5 1412 aa11.35□□□□□ -0.59
LIN7A-202ENST00000549417 ROBO1Q9Y6N7 1651 aa11.34□□□□□ -0.59
LIN7A-202ENST00000549417 UBTFP17480 764 aaKnown RBP11.34□□□□□ -0.59
LIN7A-202ENST00000549417 FAM135BQ49AJ0 1406 aa11.34□□□□□ -0.59
LIN7A-202ENST00000549417 NLRP1Q9C000 1473 aa11.33□□□□□ -0.6
LIN7A-202ENST00000549417 KIF3BO15066 747 aa11.33□□□□□ -0.6
LIN7A-202ENST00000549417 ZC3H13Q5T200 1668 aaKnown RBP11.33□□□□□ -0.6
LIN7A-202ENST00000549417 WASHC2CQ9Y4E1 1318 aa11.33□□□□□ -0.6
LIN7A-202ENST00000549417 GPATCH8Q9UKJ3 1502 aaKnown RBP11.32□□□□□ -0.6
LIN7A-202ENST00000549417 RBM33Q96EV2 1170 aaKnown RBP11.32□□□□□ -0.6
LIN7A-202ENST00000549417 KDM5DQ9BY66 1539 aa11.31□□□□□ -0.6
LIN7A-202ENST00000549417 CFDP1Q9UEE9 299 aaPredicted RBP11.31□□□□□ -0.6
LIN7A-202ENST00000549417 EEA1Q15075 1411 aa11.3□□□□□ -0.6
LIN7A-202ENST00000549417 KIAA1107Q9UPP5 1409 aa11.29□□□□□ -0.6
LIN7A-202ENST00000549417 MEX3CQ5U5Q3 659 aaKnown RBP11.29□□□□□ -0.6
LIN7A-202ENST00000549417 ZNF644Q9H582 1327 aaPredicted RBP11.29□□□□□ -0.6
LIN7A-202ENST00000549417 PHLPP1O60346 1717 aa11.29□□□□□ -0.6
LIN7A-202ENST00000549417 DHX29Q7Z478 1369 aaKnown RBP11.28□□□□□ -0.6
LIN7A-202ENST00000549417 CCDC18Q5T9S5 1454 aa11.28□□□□□ -0.6
LIN7A-202ENST00000549417 TMEM94Q12767 1356 aa11.28□□□□□ -0.6
LIN7A-202ENST00000549417 PLEKHH2Q8IVE3 1493 aa11.27□□□□□ -0.6
LIN7A-202ENST00000549417 LTKP29376 864 aa11.27□□□□□ -0.61
LIN7A-202ENST00000549417 LRP6O75581 1613 aa11.27□□□□□ -0.61
LIN7A-202ENST00000549417 JCADQ9P266 1359 aa11.27□□□□□ -0.61
LIN7A-202ENST00000549417 SCAF11Q99590 1463 aaKnown RBP11.26□□□□□ -0.61
LIN7A-202ENST00000549417 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
LIN7A-202ENST00000549417 ZNF772Q68DY9 489 aaPredicted RBP11.26□□□□□ -0.61
LIN7A-202ENST00000549417 TXNDC2Q86VQ3 553 aa11.26□□□□□ -0.61
LIN7A-202ENST00000549417 CFAP65Q6ZU64 1925 aaKnown RBP11.26□□□□□ -0.61
LIN7A-202ENST00000549417 CCNB3Q8WWL7 1395 aa11.26□□□□□ -0.61
LIN7A-202ENST00000549417 RXRBP28702 533 aa11.25□□□□□ -0.61
LIN7A-202ENST00000549417 CASKIN1Q8WXD9 1431 aa11.25□□□□□ -0.61
LIN7A-202ENST00000549417 UBR1Q8IWV7 1749 aa11.24□□□□□ -0.61
LIN7A-202ENST00000549417 PROSER2Q86WR7 435 aaPredicted RBP11.23□□□□□ -0.61
LIN7A-202ENST00000549417 MAP3K1Q13233 1512 aa11.23□□□□□ -0.61
LIN7A-202ENST00000549417 NCOA2Q15596 1464 aa11.21□□□□□ -0.61
LIN7A-202ENST00000549417 MBD5Q9P267 1494 aa11.21□□□□□ -0.61
LIN7A-202ENST00000549417 RTEL1-TNFRSF6BF6WH68 1400 aa11.21□□□□□ -0.61
LIN7A-202ENST00000549417 SLAIN2Q9P270 581 aa11.21□□□□□ -0.61
LIN7A-202ENST00000549417 ERVK-7P63135 1459 aa11.2□□□□□ -0.62
LIN7A-202ENST00000549417 LRRC9Q6ZRR7 1453 aa11.2□□□□□ -0.62
LIN7A-202ENST00000549417 COL16A1Q07092 1604 aaPredicted RBP11.2□□□□□ -0.62
LIN7A-202ENST00000549417 NUTM2BA6NNL0 878 aaPredicted RBP11.19□□□□□ -0.62
LIN7A-202ENST00000549417 NUTM2EB1AL46 878 aaPredicted RBP11.19□□□□□ -0.62
LIN7A-202ENST00000549417 NUTM2AQ8IVF1 878 aaPredicted RBP11.19□□□□□ -0.62
LIN7A-202ENST00000549417 SLC26A8Q96RN1 970 aa11.19□□□□□ -0.62
LIN7A-202ENST00000549417 EID1Q9Y6B2 187 aa11.19□□□□□ -0.62
LIN7A-202ENST00000549417 ABCC3O15438 1527 aa11.19□□□□□ -0.62
LIN7A-202ENST00000549417 SPATA31A6Q5VVP1 1343 aa11.18□□□□□ -0.62
LIN7A-202ENST00000549417 KCNA6P17658 529 aa11.18□□□□□ -0.62
LIN7A-202ENST00000549417 NUTM2DQ5VT03 806 aaPredicted RBP11.18□□□□□ -0.62
LIN7A-202ENST00000549417 SLIT1O75093 1534 aa11.18□□□□□ -0.62
LIN7A-202ENST00000549417 ARHGAP23Q9P227 1491 aa11.18□□□□□ -0.62
LIN7A-202ENST00000549417 MSH6P52701 1360 aa11.17□□□□□ -0.62
LIN7A-202ENST00000549417 SETBP1Q9Y6X0 1596 aa11.17□□□□□ -0.62
LIN7A-202ENST00000549417 AFF2P51816 1311 aa11.16□□□□□ -0.62
LIN7A-202ENST00000549417 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
LIN7A-202ENST00000549417 FYCO1Q9BQS8 1478 aa11.16□□□□□ -0.62
LIN7A-202ENST00000549417 CDK12Q9NYV4 1490 aaPredicted RBP11.16□□□□□ -0.62
LIN7A-202ENST00000549417 RGS12O14924 1447 aa11.16□□□□□ -0.62
LIN7A-202ENST00000549417 TIAM1Q13009 1591 aa11.16□□□□□ -0.62
LIN7A-202ENST00000549417 CEP152O94986 1710 aa11.15□□□□□ -0.62
LIN7A-202ENST00000549417 PRDM15P57071 1507 aaPredicted RBP11.15□□□□□ -0.62
LIN7A-202ENST00000549417 MTUS2Q5JR59 1369 aa11.15□□□□□ -0.63
LIN7A-202ENST00000549417 EP400Q96L91 3159 aa11.14□□□□□ -0.63
LIN7A-202ENST00000549417 CCDC141Q6ZP82 1450 aa11.13□□□□□ -0.63
LIN7A-202ENST00000549417 FGD6Q6ZV73 1430 aa11.13□□□□□ -0.63
LIN7A-202ENST00000549417 BCANQ96GW7 911 aa11.13□□□□□ -0.63
LIN7A-202ENST00000549417 STAG3Q9UJ98 1225 aa11.13□□□□□ -0.63
LIN7A-202ENST00000549417 SHPRHQ149N8 1683 aa11.13□□□□□ -0.63
LIN7A-202ENST00000549417 PPP4R3CPQ6ZMV5 832 aa11.12□□□□□ -0.63
LIN7A-202ENST00000549417 QTRT2Q9H974 415 aaKnown RBP11.12□□□□□ -0.63
LIN7A-202ENST00000549417 PIK3C2BO00750 1634 aa11.12□□□□□ -0.63
LIN7A-202ENST00000549417 TMEM2Q9UHN6 1383 aa11.12□□□□□ -0.63
LIN7A-202ENST00000549417 C8orf37Q96NL8 207 aa11.11□□□□□ -0.63
LIN7A-202ENST00000549417 C14orf37Q86TY3 774 aa11.1□□□□□ -0.63
LIN7A-202ENST00000549417 NKTRP30414 1462 aaKnown RBP11.1□□□□□ -0.63
LIN7A-202ENST00000549417 CAMSAP2Q08AD1 1489 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms