RNA–Protein interactions for RNA: ENST00000548709.1

ERBB3-206, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-206ENST00000548709 MIA2Q96PC5 1412 aa11.72□□□□□ -0.53
ERBB3-206ENST00000548709 ZNF644Q9H582 1327 aaPredicted RBP11.72□□□□□ -0.53
ERBB3-206ENST00000548709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.7□□□□□ -0.54
ERBB3-206ENST00000548709 PLXNC1O60486 1568 aa11.7□□□□□ -0.54
ERBB3-206ENST00000548709 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
ERBB3-206ENST00000548709 FAM135AQ9P2D6 1515 aa11.69□□□□□ -0.54
ERBB3-206ENST00000548709 NLRP1Q9C000 1473 aa11.69□□□□□ -0.54
ERBB3-206ENST00000548709 PZPP20742 1482 aa11.68□□□□□ -0.54
ERBB3-206ENST00000548709 NPHP4O75161 1426 aaPredicted RBP11.67□□□□□ -0.54
ERBB3-206ENST00000548709 CEP162Q5TB80 1403 aa11.67□□□□□ -0.54
ERBB3-206ENST00000548709 ZNF142P52746 1687 aaPredicted RBP11.66□□□□□ -0.54
ERBB3-206ENST00000548709 MED14O60244 1454 aa11.66□□□□□ -0.54
ERBB3-206ENST00000548709 MYO3AQ8NEV4 1616 aa11.65□□□□□ -0.54
ERBB3-206ENST00000548709 INO80Q9ULG1 1556 aaPredicted RBP11.65□□□□□ -0.54
ERBB3-206ENST00000548709 CDC42BPAQ5VT25 1732 aa11.65□□□□□ -0.54
ERBB3-206ENST00000548709 DNMT1P26358 1616 aaKnown RBP11.64□□□□□ -0.55
ERBB3-206ENST00000548709 SUPT6HQ7KZ85 1726 aaKnown RBP11.64□□□□□ -0.55
ERBB3-206ENST00000548709 EID1Q9Y6B2 187 aa11.64□□□□□ -0.55
ERBB3-206ENST00000548709 CLTCQ00610 1675 aaKnown RBP11.64□□□□□ -0.55
ERBB3-206ENST00000548709 CCDC141Q6ZP82 1450 aa11.63□□□□□ -0.55
ERBB3-206ENST00000548709 UGGT1Q9NYU2 1555 aa11.62□□□□□ -0.55
ERBB3-206ENST00000548709 KDM5DQ9BY66 1539 aa11.62□□□□□ -0.55
ERBB3-206ENST00000548709 MED1Q15648 1581 aaPredicted RBP11.62□□□□□ -0.55
ERBB3-206ENST00000548709 TXNDC2Q86VQ3 553 aa11.61□□□□□ -0.55
ERBB3-206ENST00000548709 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
ERBB3-206ENST00000548709 ADGBQ8N7X0 1667 aa11.6□□□□□ -0.55
ERBB3-206ENST00000548709 EHBP1L1Q8N3D4 1523 aa11.59□□□□□ -0.55
ERBB3-206ENST00000548709 LRRC7Q96NW7 1537 aa11.57□□□□□ -0.56
ERBB3-206ENST00000548709 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
ERBB3-206ENST00000548709 VWDEQ8N2E2 1590 aa11.57□□□□□ -0.56
ERBB3-206ENST00000548709 NEURL4Q96JN8 1562 aa11.57□□□□□ -0.56
ERBB3-206ENST00000548709 DEPDC5O75140 1603 aa11.57□□□□□ -0.56
ERBB3-206ENST00000548709 LTKP29376 864 aa11.56□□□□□ -0.56
ERBB3-206ENST00000548709 FAM135BQ49AJ0 1406 aa11.56□□□□□ -0.56
ERBB3-206ENST00000548709 TIAM1Q13009 1591 aa11.55□□□□□ -0.56
ERBB3-206ENST00000548709 SENP3Q9H4L4 574 aaPredicted RBP11.55□□□□□ -0.56
ERBB3-206ENST00000548709 RGS17Q9UGC6 210 aaPredicted RBP11.55□□□□□ -0.56
ERBB3-206ENST00000548709 NCOA2Q15596 1464 aa11.55□□□□□ -0.56
ERBB3-206ENST00000548709 KCNA6P17658 529 aa11.54□□□□□ -0.56
ERBB3-206ENST00000548709 CAMSAP2Q08AD1 1489 aa11.54□□□□□ -0.56
ERBB3-206ENST00000548709 SCAF11Q99590 1463 aaKnown RBP11.54□□□□□ -0.56
ERBB3-206ENST00000548709 HDGFP51858 240 aaKnown RBP11.53□□□□□ -0.56
ERBB3-206ENST00000548709 ARHGAP31Q2M1Z3 1444 aa11.52□□□□□ -0.56
ERBB3-206ENST00000548709 ERVK-7P63135 1459 aa11.52□□□□□ -0.56
ERBB3-206ENST00000548709 PROSER2Q86WR7 435 aaPredicted RBP11.52□□□□□ -0.57
ERBB3-206ENST00000548709 KANK1Q14678 1352 aa11.51□□□□□ -0.57
ERBB3-206ENST00000548709 ARHGEF5Q12774 1597 aa11.5□□□□□ -0.57
ERBB3-206ENST00000548709 SLC52A1Q9NWF4 448 aa11.5□□□□□ -0.57
ERBB3-206ENST00000548709 TMEM2Q9UHN6 1383 aa11.5□□□□□ -0.57
ERBB3-206ENST00000548709 MYOM3Q5VTT5 1437 aa11.5□□□□□ -0.57
ERBB3-206ENST00000548709 ABCC3O15438 1527 aa11.5□□□□□ -0.57
ERBB3-206ENST00000548709 ARHGAP23Q9P227 1491 aa11.49□□□□□ -0.57
ERBB3-206ENST00000548709 POLR1AO95602 1720 aaPredicted RBP11.49□□□□□ -0.57
ERBB3-206ENST00000548709 IDI1Q13907 227 aa11.48□□□□□ -0.57
ERBB3-206ENST00000548709 POTEAQ6S8J7 498 aa11.48□□□□□ -0.57
ERBB3-206ENST00000548709 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.48□□□□□ -0.57
ERBB3-206ENST00000548709 SLAIN2Q9P270 581 aa11.48□□□□□ -0.57
ERBB3-206ENST00000548709 TMEM94Q12767 1356 aa11.48□□□□□ -0.57
ERBB3-206ENST00000548709 ALKQ9UM73 1620 aa11.48□□□□□ -0.57
ERBB3-206ENST00000548709 IQGAP1P46940 1657 aa11.47□□□□□ -0.57
ERBB3-206ENST00000548709 SLIT1O75093 1534 aa11.47□□□□□ -0.57
ERBB3-206ENST00000548709 BCANQ96GW7 911 aa11.47□□□□□ -0.57
ERBB3-206ENST00000548709 RRP7BPQ9NSQ0 103 aa11.47□□□□□ -0.57
ERBB3-206ENST00000548709 RNF17Q9BXT8 1623 aaKnown RBP11.46□□□□□ -0.57
ERBB3-206ENST00000548709 SYNMO15061 1565 aa11.46□□□□□ -0.57
ERBB3-206ENST00000548709 KIF15Q9NS87 1388 aa11.46□□□□□ -0.57
ERBB3-206ENST00000548709 APLP2Q06481 763 aa11.46□□□□□ -0.57
ERBB3-206ENST00000548709 DUOX2Q9NRD8 1548 aa11.45□□□□□ -0.58
ERBB3-206ENST00000548709 MSH6P52701 1360 aa11.45□□□□□ -0.58
ERBB3-206ENST00000548709 SLC26A8Q96RN1 970 aa11.45□□□□□ -0.58
ERBB3-206ENST00000548709 LRRC9Q6ZRR7 1453 aa11.44□□□□□ -0.58
ERBB3-206ENST00000548709 ERBINQ96RT1 1412 aa11.44□□□□□ -0.58
ERBB3-206ENST00000548709 JCADQ9P266 1359 aa11.44□□□□□ -0.58
ERBB3-206ENST00000548709 ZNF772Q68DY9 489 aaPredicted RBP11.44□□□□□ -0.58
ERBB3-206ENST00000548709 MAST1Q9Y2H9 1570 aa11.43□□□□□ -0.58
ERBB3-206ENST00000548709 KANK4Q5T7N3 995 aaPredicted RBP11.43□□□□□ -0.58
ERBB3-206ENST00000548709 ZC3H13Q5T200 1668 aaKnown RBP11.43□□□□□ -0.58
ERBB3-206ENST00000548709 SPATA31A6Q5VVP1 1343 aa11.42□□□□□ -0.58
ERBB3-206ENST00000548709 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.42□□□□□ -0.58
ERBB3-206ENST00000548709 NCOA3Q9Y6Q9 1424 aa11.42□□□□□ -0.58
ERBB3-206ENST00000548709 ANKRD30AQ9BXX3 1397 aa11.41□□□□□ -0.58
ERBB3-206ENST00000548709 PPP1R15AO75807 674 aaPredicted RBP11.41□□□□□ -0.58
ERBB3-206ENST00000548709 CADPS2Q86UW7 1296 aa11.41□□□□□ -0.58
ERBB3-206ENST00000548709 TBX22Q9Y458 520 aa11.41□□□□□ -0.58
ERBB3-206ENST00000548709 EIF2AK4Q9P2K8 1649 aaKnown RBP11.41□□□□□ -0.58
ERBB3-206ENST00000548709 VPS8Q8N3P4 1428 aa11.41□□□□□ -0.58
ERBB3-206ENST00000548709 MAP3K1Q13233 1512 aa11.4□□□□□ -0.58
ERBB3-206ENST00000548709 C19orf44Q9H6X5 657 aa11.4□□□□□ -0.58
ERBB3-206ENST00000548709 MEX3CQ5U5Q3 659 aaKnown RBP11.39□□□□□ -0.59
ERBB3-206ENST00000548709 C14orf37Q86TY3 774 aa11.39□□□□□ -0.59
ERBB3-206ENST00000548709 NKTRP30414 1462 aaKnown RBP11.38□□□□□ -0.59
ERBB3-206ENST00000548709 ABCC5O15440 1437 aa11.38□□□□□ -0.59
ERBB3-206ENST00000548709 ATF3P18847 181 aa11.38□□□□□ -0.59
ERBB3-206ENST00000548709 RBM33Q96EV2 1170 aaKnown RBP11.38□□□□□ -0.59
ERBB3-206ENST00000548709 PRDM15P57071 1507 aaPredicted RBP11.38□□□□□ -0.59
ERBB3-206ENST00000548709 EFCAB6Q5THR3 1501 aa11.38□□□□□ -0.59
ERBB3-206ENST00000548709 FGD6Q6ZV73 1430 aa11.36□□□□□ -0.59
ERBB3-206ENST00000548709 RXRBP28702 533 aa11.36□□□□□ -0.59
ERBB3-206ENST00000548709 UPF1Q92900 1129 aaKnown RBP eCLIP11.36□□□□□ -0.59
ERBB3-206ENST00000548709 CHIC2Q9UKJ5 165 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms