RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 AGLP35573 1532 aa13.67□□□□□ -0.22
SMARCC2-205ENST00000548130 DAPK1P53355 1430 aa13.66□□□□□ -0.22
SMARCC2-205ENST00000548130 MADDQ8WXG6 1647 aa13.66□□□□□ -0.22
SMARCC2-205ENST00000548130 SPINK5Q9NQ38 1064 aaPredicted RBP13.66□□□□□ -0.22
SMARCC2-205ENST00000548130 CHIC2Q9UKJ5 165 aa13.66□□□□□ -0.22
SMARCC2-205ENST00000548130 DHX29Q7Z478 1369 aaKnown RBP13.66□□□□□ -0.22
SMARCC2-205ENST00000548130 PTPRMP28827 1452 aa13.66□□□□□ -0.22
SMARCC2-205ENST00000548130 GGT6Q6P531 493 aa13.65□□□□□ -0.22
SMARCC2-205ENST00000548130 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
SMARCC2-205ENST00000548130 PLXNC1O60486 1568 aa13.63□□□□□ -0.23
SMARCC2-205ENST00000548130 KIF3BO15066 747 aa13.63□□□□□ -0.23
SMARCC2-205ENST00000548130 RRP7BPQ9NSQ0 103 aa13.63□□□□□ -0.23
SMARCC2-205ENST00000548130 MAST1Q9Y2H9 1570 aa13.62□□□□□ -0.23
SMARCC2-205ENST00000548130 CEBPAP49715 358 aaPredicted RBP13.62□□□□□ -0.23
SMARCC2-205ENST00000548130 ESF1Q9H501 851 aaKnown RBP13.62□□□□□ -0.23
SMARCC2-205ENST00000548130 RIMS1Q86UR5 1692 aaKnown RBP13.62□□□□□ -0.23
SMARCC2-205ENST00000548130 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
SMARCC2-205ENST00000548130 ITGAEP38570 1179 aa13.61□□□□□ -0.23
SMARCC2-205ENST00000548130 DNMT1P26358 1616 aaKnown RBP13.61□□□□□ -0.23
SMARCC2-205ENST00000548130 KIF15Q9NS87 1388 aa13.6□□□□□ -0.23
SMARCC2-205ENST00000548130 ADGBQ8N7X0 1667 aa13.6□□□□□ -0.23
SMARCC2-205ENST00000548130 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
SMARCC2-205ENST00000548130 ANKRD30AQ9BXX3 1397 aa13.58□□□□□ -0.23
SMARCC2-205ENST00000548130 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
SMARCC2-205ENST00000548130 FER1L4A9Z1Z3 1794 aa13.58□□□□□ -0.24
SMARCC2-205ENST00000548130 ZNF219Q9P2Y4 722 aaPredicted RBP13.57□□□□□ -0.24
SMARCC2-205ENST00000548130 CROCC2H7BZ55 1655 aa13.56□□□□□ -0.24
SMARCC2-205ENST00000548130 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMARCC2-205ENST00000548130 NCOA1Q15788 1441 aa13.56□□□□□ -0.24
SMARCC2-205ENST00000548130 CNTLNQ9NXG0 1405 aa13.56□□□□□ -0.24
SMARCC2-205ENST00000548130 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
SMARCC2-205ENST00000548130 DUOX2Q9NRD8 1548 aa13.55□□□□□ -0.24
SMARCC2-205ENST00000548130 ZMYM3Q14202 1370 aa13.55□□□□□ -0.24
SMARCC2-205ENST00000548130 DSG3P32926 999 aa13.54□□□□□ -0.24
SMARCC2-205ENST00000548130 ADGRL2O95490 1459 aa13.54□□□□□ -0.24
SMARCC2-205ENST00000548130 WASHC2CQ9Y4E1 1318 aa13.53□□□□□ -0.24
SMARCC2-205ENST00000548130 ERBINQ96RT1 1412 aa13.53□□□□□ -0.24
SMARCC2-205ENST00000548130 ROCK1Q13464 1354 aa13.5□□□□□ -0.25
SMARCC2-205ENST00000548130 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
SMARCC2-205ENST00000548130 CLTCQ00610 1675 aaKnown RBP13.49□□□□□ -0.25
SMARCC2-205ENST00000548130 HSPA2P54652 639 aa13.48□□□□□ -0.25
SMARCC2-205ENST00000548130 FBXO31Q5XUX0 539 aaPredicted RBP13.48□□□□□ -0.25
SMARCC2-205ENST00000548130 EIF2AK4Q9P2K8 1649 aaKnown RBP13.48□□□□□ -0.25
SMARCC2-205ENST00000548130 KDM5DQ9BY66 1539 aa13.48□□□□□ -0.25
SMARCC2-205ENST00000548130 C3P01024 1663 aa13.47□□□□□ -0.25
SMARCC2-205ENST00000548130 RNF17Q9BXT8 1623 aaKnown RBP13.47□□□□□ -0.25
SMARCC2-205ENST00000548130 LMTK3Q96Q04 1460 aa13.47□□□□□ -0.25
SMARCC2-205ENST00000548130 MROH1Q8NDA8 1641 aa13.46□□□□□ -0.25
SMARCC2-205ENST00000548130 ABCC3O15438 1527 aa13.46□□□□□ -0.25
SMARCC2-205ENST00000548130 MROH2AA6NES4 1674 aa13.45□□□□□ -0.26
SMARCC2-205ENST00000548130 NPATQ14207 1427 aa13.45□□□□□ -0.26
SMARCC2-205ENST00000548130 UHRF1BP1Q6BDS2 1440 aa13.45□□□□□ -0.26
SMARCC2-205ENST00000548130 KANK1Q14678 1352 aa13.45□□□□□ -0.26
SMARCC2-205ENST00000548130 FAM135AQ9P2D6 1515 aa13.44□□□□□ -0.26
SMARCC2-205ENST00000548130 PRDM15P57071 1507 aaPredicted RBP13.43□□□□□ -0.26
SMARCC2-205ENST00000548130 PZPP20742 1482 aa13.42□□□□□ -0.26
SMARCC2-205ENST00000548130 TNRQ92752 1358 aa13.42□□□□□ -0.26
SMARCC2-205ENST00000548130 SETD1BQ9UPS6 1966 aaKnown RBP13.41□□□□□ -0.26
SMARCC2-205ENST00000548130 DEPDC5O75140 1603 aa13.4□□□□□ -0.26
SMARCC2-205ENST00000548130 NAIPQ13075 1403 aa13.39□□□□□ -0.27
SMARCC2-205ENST00000548130 CEP152O94986 1710 aa13.39□□□□□ -0.27
SMARCC2-205ENST00000548130 ZC3H13Q5T200 1668 aaKnown RBP13.38□□□□□ -0.27
SMARCC2-205ENST00000548130 PREX1Q8TCU6 1659 aa13.38□□□□□ -0.27
SMARCC2-205ENST00000548130 VWDEQ8N2E2 1590 aa13.38□□□□□ -0.27
SMARCC2-205ENST00000548130 NUP155O75694 1391 aa13.38□□□□□ -0.27
SMARCC2-205ENST00000548130 ERVK-7P63135 1459 aa13.37□□□□□ -0.27
SMARCC2-205ENST00000548130 LMTK2Q8IWU2 1503 aa13.37□□□□□ -0.27
SMARCC2-205ENST00000548130 HFM1A2PYH4 1435 aa13.37□□□□□ -0.27
SMARCC2-205ENST00000548130 ARHGAP31Q2M1Z3 1444 aa13.37□□□□□ -0.27
SMARCC2-205ENST00000548130 CAMSAP1Q5T5Y3 1602 aa13.36□□□□□ -0.27
SMARCC2-205ENST00000548130 ABCB7O75027 752 aa13.35□□□□□ -0.27
SMARCC2-205ENST00000548130 FBXO41Q8TF61 875 aa13.35□□□□□ -0.27
SMARCC2-205ENST00000548130 UNC13BO14795 1591 aa13.34□□□□□ -0.27
SMARCC2-205ENST00000548130 SPATA31D1Q6ZQQ2 1576 aa13.34□□□□□ -0.27
SMARCC2-205ENST00000548130 ZBTB22O15209 634 aa13.34□□□□□ -0.27
SMARCC2-205ENST00000548130 TRIM52Q96A61 297 aa13.34□□□□□ -0.27
SMARCC2-205ENST00000548130 MYO3AQ8NEV4 1616 aa13.34□□□□□ -0.27
SMARCC2-205ENST00000548130 A2ML1A8K2U0 1454 aa13.34□□□□□ -0.27
SMARCC2-205ENST00000548130 CEP170BQ9Y4F5 1589 aaPredicted RBP13.32□□□□□ -0.28
SMARCC2-205ENST00000548130 EFCAB6Q5THR3 1501 aa13.32□□□□□ -0.28
SMARCC2-205ENST00000548130 NCKAP5LQ9HCH0 1330 aa13.32□□□□□ -0.28
SMARCC2-205ENST00000548130 CFAP65Q6ZU64 1925 aaKnown RBP13.31□□□□□ -0.28
SMARCC2-205ENST00000548130 NLRP1Q9C000 1473 aa13.31□□□□□ -0.28
SMARCC2-205ENST00000548130 GCC2Q8IWJ2 1684 aa13.31□□□□□ -0.28
SMARCC2-205ENST00000548130 NOS1P29475 1434 aa13.3□□□□□ -0.28
SMARCC2-205ENST00000548130 IDI1Q13907 227 aa13.29□□□□□ -0.28
SMARCC2-205ENST00000548130 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
SMARCC2-205ENST00000548130 IQGAP3Q86VI3 1631 aa13.28□□□□□ -0.28
SMARCC2-205ENST00000548130 TET3O43151 1660 aa13.28□□□□□ -0.28
SMARCC2-205ENST00000548130 ZNF142P52746 1687 aaPredicted RBP13.28□□□□□ -0.28
SMARCC2-205ENST00000548130 STAG3Q9UJ98 1225 aa13.28□□□□□ -0.28
SMARCC2-205ENST00000548130 SETD5Q9C0A6 1442 aa13.28□□□□□ -0.28
SMARCC2-205ENST00000548130 RPRD2Q5VT52 1461 aaKnown RBP13.28□□□□□ -0.28
SMARCC2-205ENST00000548130 UGGT1Q9NYU2 1555 aa13.28□□□□□ -0.28
SMARCC2-205ENST00000548130 SYNMO15061 1565 aa13.26□□□□□ -0.29
SMARCC2-205ENST00000548130 PLA2R1Q13018 1463 aa13.26□□□□□ -0.29
SMARCC2-205ENST00000548130 PKD2Q13563 968 aa13.26□□□□□ -0.29
SMARCC2-205ENST00000548130 SLC52A1Q9NWF4 448 aa13.26□□□□□ -0.29
SMARCC2-205ENST00000548130 ANKLE2Q86XL3 938 aa13.25□□□□□ -0.29
SMARCC2-205ENST00000548130 STRCQ7RTU9 1775 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms