RNA–Protein interactions for RNA: ENST00000547228.1

PFDN5-205, Transcript of prefoldin subunit 5, humanhuman

TSL 5

Gene PFDN5, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-205ENST00000547228 NPHP4O75161 1426 aaPredicted RBP9.43□□□□□ -0.9
PFDN5-205ENST00000547228 WASHC2CQ9Y4E1 1318 aa9.43□□□□□ -0.9
PFDN5-205ENST00000547228 ABCC1P33527 1531 aa9.42□□□□□ -0.9
PFDN5-205ENST00000547228 MYO3AQ8NEV4 1616 aa9.41□□□□□ -0.9
PFDN5-205ENST00000547228 FAM135AQ9P2D6 1515 aa9.41□□□□□ -0.9
PFDN5-205ENST00000547228 KIAA1107Q9UPP5 1409 aa9.4□□□□□ -0.9
PFDN5-205ENST00000547228 ZNF142P52746 1687 aaPredicted RBP9.4□□□□□ -0.9
PFDN5-205ENST00000547228 KIF3BO15066 747 aa9.4□□□□□ -0.9
PFDN5-205ENST00000547228 KIDINS220Q9ULH0 1771 aa9.4□□□□□ -0.91
PFDN5-205ENST00000547228 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
PFDN5-205ENST00000547228 DNMT1P26358 1616 aaKnown RBP9.39□□□□□ -0.91
PFDN5-205ENST00000547228 SAMD9LQ8IVG5 1584 aa9.39□□□□□ -0.91
PFDN5-205ENST00000547228 MED14O60244 1454 aa9.39□□□□□ -0.91
PFDN5-205ENST00000547228 PLEKHH2Q8IVE3 1493 aa9.39□□□□□ -0.91
PFDN5-205ENST00000547228 LRRC7Q96NW7 1537 aa9.38□□□□□ -0.91
PFDN5-205ENST00000547228 UPF1Q92900 1129 aaKnown RBP eCLIP9.38□□□□□ -0.91
PFDN5-205ENST00000547228 FAM135BQ49AJ0 1406 aa9.38□□□□□ -0.91
PFDN5-205ENST00000547228 DHX29Q7Z478 1369 aaKnown RBP9.37□□□□□ -0.91
PFDN5-205ENST00000547228 CLTCQ00610 1675 aaKnown RBP9.37□□□□□ -0.91
PFDN5-205ENST00000547228 NLRP1Q9C000 1473 aa9.37□□□□□ -0.91
PFDN5-205ENST00000547228 VWDEQ8N2E2 1590 aa9.37□□□□□ -0.91
PFDN5-205ENST00000547228 ATP7AQ04656 1500 aa9.36□□□□□ -0.91
PFDN5-205ENST00000547228 CCDC18Q5T9S5 1454 aa9.36□□□□□ -0.91
PFDN5-205ENST00000547228 ZNF772Q68DY9 489 aaPredicted RBP9.36□□□□□ -0.91
PFDN5-205ENST00000547228 PELP1Q8IZL8 1130 aaKnown RBP9.36□□□□□ -0.91
PFDN5-205ENST00000547228 EID1Q9Y6B2 187 aa9.36□□□□□ -0.91
PFDN5-205ENST00000547228 SUPT6HQ7KZ85 1726 aaKnown RBP9.36□□□□□ -0.91
PFDN5-205ENST00000547228 CCNB3Q8WWL7 1395 aa9.36□□□□□ -0.91
PFDN5-205ENST00000547228 ARHGAP35Q9NRY4 1499 aa9.35□□□□□ -0.91
PFDN5-205ENST00000547228 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
PFDN5-205ENST00000547228 RSPH4AQ5TD94 716 aa9.35□□□□□ -0.91
PFDN5-205ENST00000547228 TXNDC2Q86VQ3 553 aa9.35□□□□□ -0.91
PFDN5-205ENST00000547228 UGGT1Q9NYU2 1555 aa9.35□□□□□ -0.91
PFDN5-205ENST00000547228 CDC42BPBQ9Y5S2 1711 aa9.35□□□□□ -0.91
PFDN5-205ENST00000547228 ITSN2Q9NZM3 1697 aa9.35□□□□□ -0.91
PFDN5-205ENST00000547228 PREX2Q70Z35 1606 aa9.34□□□□□ -0.91
PFDN5-205ENST00000547228 ALKQ9UM73 1620 aa9.34□□□□□ -0.91
PFDN5-205ENST00000547228 PZPP20742 1482 aa9.34□□□□□ -0.91
PFDN5-205ENST00000547228 NEURL4Q96JN8 1562 aa9.34□□□□□ -0.91
PFDN5-205ENST00000547228 RTEL1-TNFRSF6BF6WH68 1400 aa9.34□□□□□ -0.91
PFDN5-205ENST00000547228 HOMEZQ8IX15 550 aa9.34□□□□□ -0.91
PFDN5-205ENST00000547228 SYCP2Q9BX26 1530 aa9.34□□□□□ -0.91
PFDN5-205ENST00000547228 GPATCH8Q9UKJ3 1502 aaKnown RBP9.34□□□□□ -0.91
PFDN5-205ENST00000547228 CASKIN1Q8WXD9 1431 aa9.33□□□□□ -0.92
PFDN5-205ENST00000547228 APLP2Q06481 763 aa9.33□□□□□ -0.92
PFDN5-205ENST00000547228 MEX3CQ5U5Q3 659 aaKnown RBP9.33□□□□□ -0.92
PFDN5-205ENST00000547228 PLXNC1O60486 1568 aa9.33□□□□□ -0.92
PFDN5-205ENST00000547228 RXRBP28702 533 aa9.32□□□□□ -0.92
PFDN5-205ENST00000547228 PROSER2Q86WR7 435 aaPredicted RBP9.32□□□□□ -0.92
PFDN5-205ENST00000547228 TRIM52Q96A61 297 aa9.32□□□□□ -0.92
PFDN5-205ENST00000547228 DEPDC5O75140 1603 aa9.31□□□□□ -0.92
PFDN5-205ENST00000547228 TSPY4P0CV99 314 aa9.31□□□□□ -0.92
PFDN5-205ENST00000547228 TSPY10P0CW01 314 aa9.31□□□□□ -0.92
PFDN5-205ENST00000547228 JCADQ9P266 1359 aa9.31□□□□□ -0.92
PFDN5-205ENST00000547228 RNF17Q9BXT8 1623 aaKnown RBP9.31□□□□□ -0.92
PFDN5-205ENST00000547228 SLAIN2Q9P270 581 aa9.3□□□□□ -0.92
PFDN5-205ENST00000547228 KDM5DQ9BY66 1539 aa9.3□□□□□ -0.92
PFDN5-205ENST00000547228 ZNF644Q9H582 1327 aaPredicted RBP9.3□□□□□ -0.92
PFDN5-205ENST00000547228 POLR1AO95602 1720 aaPredicted RBP9.29□□□□□ -0.92
PFDN5-205ENST00000547228 KCNA6P17658 529 aa9.29□□□□□ -0.92
PFDN5-205ENST00000547228 LTKP29376 864 aa9.29□□□□□ -0.92
PFDN5-205ENST00000547228 TPRNQ4KMQ1 711 aa9.29□□□□□ -0.92
PFDN5-205ENST00000547228 STAG3Q9UJ98 1225 aa9.29□□□□□ -0.92
PFDN5-205ENST00000547228 SPATA31A6Q5VVP1 1343 aa9.29□□□□□ -0.92
PFDN5-205ENST00000547228 TMEM94Q12767 1356 aa9.28□□□□□ -0.92
PFDN5-205ENST00000547228 MYT1Q01538 1121 aa9.28□□□□□ -0.92
PFDN5-205ENST00000547228 SYNMO15061 1565 aa9.28□□□□□ -0.92
PFDN5-205ENST00000547228 INO80Q9ULG1 1556 aaPredicted RBP9.28□□□□□ -0.92
PFDN5-205ENST00000547228 MTUS2Q5JR59 1369 aa9.27□□□□□ -0.93
PFDN5-205ENST00000547228 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
PFDN5-205ENST00000547228 SCAF11Q99590 1463 aaKnown RBP9.27□□□□□ -0.93
PFDN5-205ENST00000547228 IQGAP1P46940 1657 aa9.26□□□□□ -0.93
PFDN5-205ENST00000547228 ERICH6Q7L0X2 663 aa9.26□□□□□ -0.93
PFDN5-205ENST00000547228 MSH6P52701 1360 aa9.25□□□□□ -0.93
PFDN5-205ENST00000547228 ZRANB1Q9UGI0 708 aa9.25□□□□□ -0.93
PFDN5-205ENST00000547228 MBD5Q9P267 1494 aa9.25□□□□□ -0.93
PFDN5-205ENST00000547228 ADGBQ8N7X0 1667 aa9.25□□□□□ -0.93
PFDN5-205ENST00000547228 LRRC9Q6ZRR7 1453 aa9.24□□□□□ -0.93
PFDN5-205ENST00000547228 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
PFDN5-205ENST00000547228 CDC42BPAQ5VT25 1732 aa9.24□□□□□ -0.93
PFDN5-205ENST00000547228 FYCO1Q9BQS8 1478 aa9.23□□□□□ -0.93
PFDN5-205ENST00000547228 SLC26A8Q96RN1 970 aa9.23□□□□□ -0.93
PFDN5-205ENST00000547228 NUTM2BA6NNL0 878 aaPredicted RBP9.22□□□□□ -0.93
PFDN5-205ENST00000547228 NUTM2EB1AL46 878 aaPredicted RBP9.22□□□□□ -0.93
PFDN5-205ENST00000547228 HDGFP51858 240 aaKnown RBP9.22□□□□□ -0.93
PFDN5-205ENST00000547228 NUTM2DQ5VT03 806 aaPredicted RBP9.22□□□□□ -0.93
PFDN5-205ENST00000547228 C14orf37Q86TY3 774 aa9.22□□□□□ -0.93
PFDN5-205ENST00000547228 NUTM2AQ8IVF1 878 aaPredicted RBP9.22□□□□□ -0.93
PFDN5-205ENST00000547228 TMEM2Q9UHN6 1383 aa9.21□□□□□ -0.94
PFDN5-205ENST00000547228 FGD6Q6ZV73 1430 aa9.21□□□□□ -0.94
PFDN5-205ENST00000547228 ATF3P18847 181 aa9.2□□□□□ -0.94
PFDN5-205ENST00000547228 RBM6P78332 1123 aaKnown RBP9.2□□□□□ -0.94
PFDN5-205ENST00000547228 NGLY1Q96IV0 654 aa9.2□□□□□ -0.94
PFDN5-205ENST00000547228 QTRT2Q9H974 415 aaKnown RBP9.2□□□□□ -0.94
PFDN5-205ENST00000547228 ERVK-7P63135 1459 aa9.2□□□□□ -0.94
PFDN5-205ENST00000547228 CCDC141Q6ZP82 1450 aa9.2□□□□□ -0.94
PFDN5-205ENST00000547228 CADPS2Q86UW7 1296 aa9.19□□□□□ -0.94
PFDN5-205ENST00000547228 CDK12Q9NYV4 1490 aaPredicted RBP9.19□□□□□ -0.94
PFDN5-205ENST00000547228 ARHGAP23Q9P227 1491 aa9.19□□□□□ -0.94
PFDN5-205ENST00000547228 SLIT1O75093 1534 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms