RNA–Protein interactions for RNA: ENST00000545790.5

MMP17-211, Transcript of matrix metallopeptidase 17, humanhuman

TSL 2

Gene MMP17, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-211ENST00000545790 PTPRKQ15262 1439 aa35.55■■■■□ 3.28
MMP17-211ENST00000545790 ITGAEP38570 1179 aa35.54■■■■□ 3.28
MMP17-211ENST00000545790 FAM135AQ9P2D6 1515 aa35.53■■■■□ 3.28
MMP17-211ENST00000545790 RNF17Q9BXT8 1623 aaKnown RBP35.49■■■■□ 3.27
MMP17-211ENST00000545790 MROH2AA6NES4 1674 aa35.47■■■■□ 3.27
MMP17-211ENST00000545790 WASHC2CQ9Y4E1 1318 aa35.44■■■■□ 3.26
MMP17-211ENST00000545790 ANKRD50Q9ULJ7 1429 aa35.43■■■■□ 3.26
MMP17-211ENST00000545790 ZMYM3Q14202 1370 aa35.42■■■■□ 3.26
MMP17-211ENST00000545790 CLTCQ00610 1675 aaKnown RBP35.42■■■■□ 3.26
MMP17-211ENST00000545790 KDM5DQ9BY66 1539 aa35.42■■■■□ 3.26
MMP17-211ENST00000545790 PLPPR3Q6T4P5 718 aa35.41■■■■□ 3.26
MMP17-211ENST00000545790 CEBPAP49715 358 aaPredicted RBP35.39■■■■□ 3.26
MMP17-211ENST00000545790 C3P01024 1663 aa35.38■■■■□ 3.25
MMP17-211ENST00000545790 KANK1Q14678 1352 aa35.37■■■■□ 3.25
MMP17-211ENST00000545790 ZC3H13Q5T200 1668 aaKnown RBP35.35■■■■□ 3.25
MMP17-211ENST00000545790 PRDM15P57071 1507 aaPredicted RBP35.34■■■■□ 3.25
MMP17-211ENST00000545790 DEPDC5O75140 1603 aa35.34■■■■□ 3.25
MMP17-211ENST00000545790 MROH1Q8NDA8 1641 aa35.34■■■■□ 3.25
MMP17-211ENST00000545790 NPATQ14207 1427 aa35.31■■■■□ 3.24
MMP17-211ENST00000545790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.3■■■■□ 3.24
MMP17-211ENST00000545790 ABCC3O15438 1527 aa35.3■■■■□ 3.24
MMP17-211ENST00000545790 SETD1BQ9UPS6 1966 aaKnown RBP35.29■■■■□ 3.24
MMP17-211ENST00000545790 PZPP20742 1482 aa35.23■■■■□ 3.23
MMP17-211ENST00000545790 HFM1A2PYH4 1435 aa35.21■■■■□ 3.23
MMP17-211ENST00000545790 NAIPQ13075 1403 aa35.21■■■■□ 3.23
MMP17-211ENST00000545790 VWDEQ8N2E2 1590 aa35.2■■■■□ 3.23
MMP17-211ENST00000545790 PREX1Q8TCU6 1659 aa35.2■■■■□ 3.23
MMP17-211ENST00000545790 CEP152O94986 1710 aa35.19■■■■□ 3.22
MMP17-211ENST00000545790 LMTK2Q8IWU2 1503 aa35.19■■■■□ 3.22
MMP17-211ENST00000545790 GCC2Q8IWJ2 1684 aa35.18■■■■□ 3.22
MMP17-211ENST00000545790 UNC13BO14795 1591 aa35.18■■■■□ 3.22
MMP17-211ENST00000545790 UHRF1BP1Q6BDS2 1440 aa35.18■■■■□ 3.22
MMP17-211ENST00000545790 CAMSAP1Q5T5Y3 1602 aa35.17■■■■□ 3.22
MMP17-211ENST00000545790 ARHGAP31Q2M1Z3 1444 aa35.16■■■■□ 3.22
MMP17-211ENST00000545790 LMTK3Q96Q04 1460 aa35.15■■■■□ 3.22
MMP17-211ENST00000545790 FBXO31Q5XUX0 539 aaPredicted RBP35.11■■■■□ 3.21
MMP17-211ENST00000545790 NUP155O75694 1391 aa35.09■■■■□ 3.21
MMP17-211ENST00000545790 TNRQ92752 1358 aa35.09■■■■□ 3.21
MMP17-211ENST00000545790 ACIN1Q9UKV3 1341 aaKnown RBP35.05■■■■□ 3.2
MMP17-211ENST00000545790 SPATA31D1Q6ZQQ2 1576 aa35.04■■■■□ 3.2
MMP17-211ENST00000545790 IQGAP3Q86VI3 1631 aa35.04■■■■□ 3.2
MMP17-211ENST00000545790 EFCAB6Q5THR3 1501 aa35.04■■■■□ 3.2
MMP17-211ENST00000545790 ERVK-7P63135 1459 aa35.03■■■■□ 3.2
MMP17-211ENST00000545790 TET3O43151 1660 aa35.03■■■■□ 3.2
MMP17-211ENST00000545790 RPRD2Q5VT52 1461 aaKnown RBP35.02■■■■□ 3.2
MMP17-211ENST00000545790 MYO3AQ8NEV4 1616 aa35.01■■■■□ 3.19
MMP17-211ENST00000545790 NLRP1Q9C000 1473 aa34.99■■■■□ 3.19
MMP17-211ENST00000545790 ZNF142P52746 1687 aaPredicted RBP34.96■■■■□ 3.19
MMP17-211ENST00000545790 HSPA2P54652 639 aa34.96■■■■□ 3.19
MMP17-211ENST00000545790 A2ML1A8K2U0 1454 aa34.96■■■■□ 3.19
MMP17-211ENST00000545790 CEP170BQ9Y4F5 1589 aaPredicted RBP34.96■■■■□ 3.19
MMP17-211ENST00000545790 SETD5Q9C0A6 1442 aa34.95■■■■□ 3.19
MMP17-211ENST00000545790 TRIM52Q96A61 297 aa34.94■■■■□ 3.18
MMP17-211ENST00000545790 CFAP65Q6ZU64 1925 aaKnown RBP34.94■■■■□ 3.18
MMP17-211ENST00000545790 NOS1P29475 1434 aa34.89■■■■□ 3.18
MMP17-211ENST00000545790 THEMISQ8N1K5 641 aaPredicted RBP34.85■■■■□ 3.17
MMP17-211ENST00000545790 E9PCH4 1651 aa34.85■■■■□ 3.17
MMP17-211ENST00000545790 SLC52A1Q9NWF4 448 aa34.84■■■■□ 3.17
MMP17-211ENST00000545790 UGGT1Q9NYU2 1555 aa34.83■■■■□ 3.17
MMP17-211ENST00000545790 PLA2R1Q13018 1463 aa34.8■■■■□ 3.16
MMP17-211ENST00000545790 SLC4A1APQ9BWU0 796 aaKnown RBP34.8■■■■□ 3.16
MMP17-211ENST00000545790 HRCP23327 699 aa34.79■■■■□ 3.16
MMP17-211ENST00000545790 SYNMO15061 1565 aa34.79■■■■□ 3.16
MMP17-211ENST00000545790 RAB3GAP2Q9H2M9 1393 aa34.78■■■■□ 3.16
MMP17-211ENST00000545790 DMRT2Q9Y5R5 561 aa34.78■■■■□ 3.16
MMP17-211ENST00000545790 IDI1Q13907 227 aa34.76■■■■□ 3.16
MMP17-211ENST00000545790 PKD2Q13563 968 aa34.74■■■■□ 3.15
MMP17-211ENST00000545790 STAG3Q9UJ98 1225 aa34.74■■■■□ 3.15
MMP17-211ENST00000545790 KDM5AP29375 1690 aaKnown RBP34.71■■■■□ 3.15
MMP17-211ENST00000545790 PTPRTO14522 1441 aa34.7■■■■□ 3.15
MMP17-211ENST00000545790 PIK3C2BO00750 1634 aa34.7■■■■□ 3.14
MMP17-211ENST00000545790 UBR1Q8IWV7 1749 aa34.69■■■■□ 3.14
MMP17-211ENST00000545790 STRCQ7RTU9 1775 aa34.69■■■■□ 3.14
MMP17-211ENST00000545790 TRIM26Q12899 539 aaPredicted RBP34.69■■■■□ 3.14
MMP17-211ENST00000545790 MPHOSPH9Q99550 1183 aa34.69■■■■□ 3.14
MMP17-211ENST00000545790 ANKLE2Q86XL3 938 aa34.67■■■■□ 3.14
MMP17-211ENST00000545790 SPHKAPQ2M3C7 1700 aa34.67■■■■□ 3.14
MMP17-211ENST00000545790 ADGRB3O60242 1522 aa34.63■■■■□ 3.13
MMP17-211ENST00000545790 NCKAP5LQ9HCH0 1330 aa34.62■■■■□ 3.13
MMP17-211ENST00000545790 TRPM2O94759 1503 aa34.6■■■■□ 3.13
MMP17-211ENST00000545790 SLIT1O75093 1534 aa34.59■■■■□ 3.13
MMP17-211ENST00000545790 EID1Q9Y6B2 187 aa34.58■■■■□ 3.13
MMP17-211ENST00000545790 ARHGAP23Q9P227 1491 aa34.58■■■■□ 3.13
MMP17-211ENST00000545790 POLR1AO95602 1720 aaPredicted RBP34.57■■■■□ 3.12
MMP17-211ENST00000545790 TMEM2Q9UHN6 1383 aa34.57■■■■□ 3.12
MMP17-211ENST00000545790 CHGAP10645 457 aaKnown RBP34.55■■■■□ 3.12
MMP17-211ENST00000545790 HDGFP51858 240 aaKnown RBP34.55■■■■□ 3.12
MMP17-211ENST00000545790 TMEM131LA2VDJ0 1609 aa34.53■■■■□ 3.12
MMP17-211ENST00000545790 TXNDC2Q86VQ3 553 aa34.52■■■■□ 3.12
MMP17-211ENST00000545790 MED14O60244 1454 aa34.52■■■■□ 3.12
MMP17-211ENST00000545790 SCAF11Q99590 1463 aaKnown RBP34.51■■■■□ 3.11
MMP17-211ENST00000545790 FOXD1Q16676 465 aa34.49■■■■□ 3.11
MMP17-211ENST00000545790 NPHP4O75161 1426 aaPredicted RBP34.47■■■■□ 3.11
MMP17-211ENST00000545790 NEURL4Q96JN8 1562 aa34.47■■■■□ 3.11
MMP17-211ENST00000545790 CLTCL1P53675 1640 aa34.47■■■■□ 3.11
MMP17-211ENST00000545790 LTKP29376 864 aa34.45■■■■□ 3.11
MMP17-211ENST00000545790 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.45■■■■□ 3.11
MMP17-211ENST00000545790 CCDC144AA2RUR9 1427 aa34.44■■■■□ 3.1
MMP17-211ENST00000545790 MYO5BQ9ULV0 1848 aa34.43■■■■□ 3.1
MMP17-211ENST00000545790 KIF1BO60333 1816 aa34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms