RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 CCDC144AA2RUR9 1427 aa21.46■■□□□ 1.03
SNRNP70-203ENST00000544278 CDC42BPBQ9Y5S2 1711 aa21.44■■□□□ 1.02
SNRNP70-203ENST00000544278 ARHGEF12Q9NZN5 1544 aa21.43■■□□□ 1.02
SNRNP70-203ENST00000544278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.42■■□□□ 1.025e-8■■□□□ 12.5
SNRNP70-203ENST00000544278 FAM135AQ9P2D6 1515 aa21.42■■□□□ 1.02
SNRNP70-203ENST00000544278 EFCAB2Q5VUJ9 269 aa21.4■■□□□ 1.02
SNRNP70-203ENST00000544278 TRAPPC8Q9Y2L5 1435 aa21.4■■□□□ 1.02
SNRNP70-203ENST00000544278 ZBED9Q6R2W3 1325 aa21.4■■□□□ 1.02
SNRNP70-203ENST00000544278 PLA2R1Q13018 1463 aa21.38■■□□□ 1.01
SNRNP70-203ENST00000544278 PNISRQ8TF01 805 aaKnown RBP21.37■■□□□ 1.01
SNRNP70-203ENST00000544278 SPAG9O60271 1321 aaKnown RBP21.36■■□□□ 1.01
SNRNP70-203ENST00000544278 KDM5CP41229 1560 aa21.35■■□□□ 1.01
SNRNP70-203ENST00000544278 KIF3BO15066 747 aa21.35■■□□□ 1.01
SNRNP70-203ENST00000544278 CHGAP10645 457 aaKnown RBP21.35■■□□□ 1.01
SNRNP70-203ENST00000544278 SHANK2Q9UPX8 1470 aa21.35■■□□□ 1.01
SNRNP70-203ENST00000544278 PANK3Q9H999 370 aa21.34■■□□□ 1.01
SNRNP70-203ENST00000544278 DISP3Q9P2K9 1392 aa21.34■■□□□ 1.01
SNRNP70-203ENST00000544278 RALGAPBQ86X10 1494 aa21.33■■□□□ 1
SNRNP70-203ENST00000544278 RSPH4AQ5TD94 716 aa21.31■■□□□ 1
SNRNP70-203ENST00000544278 PREX2Q70Z35 1606 aa21.31■■□□□ 1
SNRNP70-203ENST00000544278 CDCA7LQ96GN5 454 aa21.3■■□□□ 1
SNRNP70-203ENST00000544278 A2MP01023 1474 aa21.29■■□□□ 1
SNRNP70-203ENST00000544278 NUTM2DQ5VT03 806 aaPredicted RBP21.29■■□□□ 1
SNRNP70-203ENST00000544278 PPP4R2Q9NY27 417 aa21.29■■□□□ 1
SNRNP70-203ENST00000544278 ABCC2Q92887 1545 aa21.28■■□□□ 1
SNRNP70-203ENST00000544278 PRAG1Q86YV5 1406 aa21.28■■□□□ 1
SNRNP70-203ENST00000544278 UHRF1BP1Q6BDS2 1440 aa21.27■■□□□ 1
SNRNP70-203ENST00000544278 TESK2Q96S53 571 aa21.26■□□□□ 0.99
SNRNP70-203ENST00000544278 ARHGEF5Q12774 1597 aa21.25■□□□□ 0.99
SNRNP70-203ENST00000544278 NUDCQ9Y266 331 aa21.25■□□□□ 0.99
SNRNP70-203ENST00000544278 SCAPERQ9BY12 1400 aa21.25■□□□□ 0.99
SNRNP70-203ENST00000544278 MYBBP1AQ9BQG0 1328 aaKnown RBP21.23■□□□□ 0.99
SNRNP70-203ENST00000544278 PLCH2O75038 1416 aa21.23■□□□□ 0.99
SNRNP70-203ENST00000544278 MSH5O43196 834 aa21.22■□□□□ 0.99
SNRNP70-203ENST00000544278 PLIN1O60240 522 aa21.22■□□□□ 0.99
SNRNP70-203ENST00000544278 GGT6Q6P531 493 aa21.22■□□□□ 0.99
SNRNP70-203ENST00000544278 KDM5DQ9BY66 1539 aa21.22■□□□□ 0.99
SNRNP70-203ENST00000544278 PER1O15534 1290 aaPredicted RBP21.2■□□□□ 0.98
SNRNP70-203ENST00000544278 CFAP70Q5T0N1 1121 aa21.2■□□□□ 0.98
SNRNP70-203ENST00000544278 CCDC136Q96JN2 1154 aa21.2■□□□□ 0.98
SNRNP70-203ENST00000544278 SKAP1Q86WV1 359 aa21.19■□□□□ 0.98
SNRNP70-203ENST00000544278 ZCCHC11Q5TAX3 1644 aaKnown RBP21.19■□□□□ 0.98
SNRNP70-203ENST00000544278 KTN1Q86UP2 1357 aaKnown RBP21.19■□□□□ 0.98
SNRNP70-203ENST00000544278 TMF1P82094 1093 aa21.18■□□□□ 0.98
SNRNP70-203ENST00000544278 ERICH6Q7L0X2 663 aa21.17■□□□□ 0.98
SNRNP70-203ENST00000544278 MYO5CQ9NQX4 1742 aa21.17■□□□□ 0.98
SNRNP70-203ENST00000544278 TNNT2P45379 298 aaPredicted RBP21.15■□□□□ 0.98
SNRNP70-203ENST00000544278 NLRP13Q86W25 1043 aa21.15■□□□□ 0.98
SNRNP70-203ENST00000544278 RALBP1Q15311 655 aa21.15■□□□□ 0.98
SNRNP70-203ENST00000544278 EXOC6Q8TAG9 804 aa21.14■□□□□ 0.97
SNRNP70-203ENST00000544278 SHROOM2Q13796 1616 aa21.13■□□□□ 0.97
SNRNP70-203ENST00000544278 CFAP65Q6ZU64 1925 aaKnown RBP21.13■□□□□ 0.97
SNRNP70-203ENST00000544278 ERBINQ96RT1 1412 aa21.13■□□□□ 0.97
SNRNP70-203ENST00000544278 UGGT1Q9NYU2 1555 aa21.13■□□□□ 0.97
SNRNP70-203ENST00000544278 CCDC146Q8IYE0 955 aa21.12■□□□□ 0.97
SNRNP70-203ENST00000544278 ARID4BQ4LE39 1312 aaPredicted RBP21.12■□□□□ 0.97
SNRNP70-203ENST00000544278 ADGRF5Q8IZF2 1346 aa21.12■□□□□ 0.97
SNRNP70-203ENST00000544278 POLR1AO95602 1720 aaPredicted RBP21.12■□□□□ 0.97
SNRNP70-203ENST00000544278 DAXXQ9UER7 740 aaPredicted RBP21.11■□□□□ 0.97
SNRNP70-203ENST00000544278 ADAMTS8Q9UP79 889 aa21.1■□□□□ 0.97
SNRNP70-203ENST00000544278 SAFB2Q14151 953 aaKnown RBP eCLIP21.1■□□□□ 0.97
SNRNP70-203ENST00000544278 TMEM132EQ6IEE7 984 aa21.1■□□□□ 0.97
SNRNP70-203ENST00000544278 RAPGEF3O95398 923 aa21.1■□□□□ 0.97
SNRNP70-203ENST00000544278 KNSTRNQ9Y448 316 aa21.1■□□□□ 0.97
SNRNP70-203ENST00000544278 SMG6Q86US8 1419 aaKnown RBP21.09■□□□□ 0.97
SNRNP70-203ENST00000544278 DUOX2Q9NRD8 1548 aa21.09■□□□□ 0.97
SNRNP70-203ENST00000544278 FANCAO15360 1455 aa21.09■□□□□ 0.97
SNRNP70-203ENST00000544278 TRPM1Q7Z4N2 1603 aa21.08■□□□□ 0.96
SNRNP70-203ENST00000544278 TRAK1Q9UPV9 953 aa21.07■□□□□ 0.96
SNRNP70-203ENST00000544278 BRD4O60885 1362 aaPredicted RBP21.07■□□□□ 0.96
SNRNP70-203ENST00000544278 NPM1P06748 294 aaKnown RBP eCLIP21.07■□□□□ 0.96
SNRNP70-203ENST00000544278 RCAN3Q9UKA8 241 aa21.06■□□□□ 0.96
SNRNP70-203ENST00000544278 ABCC1P33527 1531 aa21.06■□□□□ 0.96
SNRNP70-203ENST00000544278 PARD3Q8TEW0 1356 aa21.04■□□□□ 0.96
SNRNP70-203ENST00000544278 ADGRL1O94910 1474 aa21.03■□□□□ 0.96
SNRNP70-203ENST00000544278 UNC13BO14795 1591 aa21.03■□□□□ 0.96
SNRNP70-203ENST00000544278 CLASP1Q7Z460 1538 aa21.03■□□□□ 0.96
SNRNP70-203ENST00000544278 ASXL2Q76L83 1435 aa21.03■□□□□ 0.96
SNRNP70-203ENST00000544278 LRPPRCP42704 1394 aaKnown RBP21.02■□□□□ 0.96
SNRNP70-203ENST00000544278 ATP10AO60312 1499 aa21.02■□□□□ 0.96
SNRNP70-203ENST00000544278 COL17A1Q9UMD9 1497 aaPredicted RBP21.02■□□□□ 0.96
SNRNP70-203ENST00000544278 NPM2Q86SE8 214 aaKnown RBP21.02■□□□□ 0.95
SNRNP70-203ENST00000544278 ANO8Q9HCE9 1232 aaPredicted RBP21.02■□□□□ 0.95
SNRNP70-203ENST00000544278 MAST1Q9Y2H9 1570 aa21.01■□□□□ 0.95
SNRNP70-203ENST00000544278 RRP1P56182 461 aaKnown RBP21.01■□□□□ 0.95
SNRNP70-203ENST00000544278 WDR7Q9Y4E6 1490 aa21.01■□□□□ 0.95
SNRNP70-203ENST00000544278 GPRASP1Q5JY77 1395 aa21■□□□□ 0.95
SNRNP70-203ENST00000544278 PPP2R1AP30153 589 aa21■□□□□ 0.95
SNRNP70-203ENST00000544278 IQGAP3Q86VI3 1631 aa21■□□□□ 0.95
SNRNP70-203ENST00000544278 MAGI2Q86UL8 1455 aa21■□□□□ 0.95
SNRNP70-203ENST00000544278 C20orf194Q5TEA3 1177 aa20.99■□□□□ 0.95
SNRNP70-203ENST00000544278 NEUROD2Q15784 382 aa20.99■□□□□ 0.95
SNRNP70-203ENST00000544278 KANK1Q14678 1352 aa20.99■□□□□ 0.95
SNRNP70-203ENST00000544278 WDR43Q15061 677 aaKnown RBP eCLIP20.99■□□□□ 0.957e-7■■■□□ 16.9
SNRNP70-203ENST00000544278 PLXNC1O60486 1568 aa20.97■□□□□ 0.95
SNRNP70-203ENST00000544278 E9PCH4 1651 aa20.97■□□□□ 0.95
SNRNP70-203ENST00000544278 OSCARQ8IYS5 282 aa20.97■□□□□ 0.95
SNRNP70-203ENST00000544278 ZFYVE16Q7Z3T8 1539 aa20.96■□□□□ 0.95
SNRNP70-203ENST00000544278 AMER1Q5JTC6 1135 aaPredicted RBP20.95■□□□□ 0.94
SNRNP70-203ENST00000544278 STK26Q9P289 416 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms