RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 NAIPQ13075 1403 aa20.52■□□□□ 0.87
SP140-213ENST00000543928 MADDQ8WXG6 1647 aa20.51■□□□□ 0.87
SP140-213ENST00000543928 RNF17Q9BXT8 1623 aaKnown RBP20.5■□□□□ 0.87
SP140-213ENST00000543928 GCC2Q8IWJ2 1684 aa20.5■□□□□ 0.87
SP140-213ENST00000543928 FER1L4A9Z1Z3 1794 aa20.49■□□□□ 0.87
SP140-213ENST00000543928 MROH1Q8NDA8 1641 aa20.47■□□□□ 0.87
SP140-213ENST00000543928 TRIM26Q12899 539 aaPredicted RBP20.47■□□□□ 0.87
SP140-213ENST00000543928 ESF1Q9H501 851 aaKnown RBP20.47■□□□□ 0.87
SP140-213ENST00000543928 PPP6R1Q9UPN7 881 aa20.47■□□□□ 0.87
SP140-213ENST00000543928 RIMS1Q86UR5 1692 aaKnown RBP20.46■□□□□ 0.87
SP140-213ENST00000543928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.46■□□□□ 0.87
SP140-213ENST00000543928 DEPDC5O75140 1603 aa20.45■□□□□ 0.87
SP140-213ENST00000543928 PRDM15P57071 1507 aaPredicted RBP20.44■□□□□ 0.86
SP140-213ENST00000543928 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
SP140-213ENST00000543928 WASHC2CQ9Y4E1 1318 aa20.43■□□□□ 0.86
SP140-213ENST00000543928 CLTCQ00610 1675 aaKnown RBP20.42■□□□□ 0.86
SP140-213ENST00000543928 KANK1Q14678 1352 aa20.42■□□□□ 0.86
SP140-213ENST00000543928 KDM5DQ9BY66 1539 aa20.42■□□□□ 0.86
SP140-213ENST00000543928 FAM135AQ9P2D6 1515 aa20.42■□□□□ 0.86
SP140-213ENST00000543928 SETD5Q9C0A6 1442 aa20.41■□□□□ 0.86
SP140-213ENST00000543928 PTPRMP28827 1452 aa20.41■□□□□ 0.86
SP140-213ENST00000543928 UNC13BO14795 1591 aa20.41■□□□□ 0.86
SP140-213ENST00000543928 ABCC3O15438 1527 aa20.4■□□□□ 0.86
SP140-213ENST00000543928 CEP152O94986 1710 aa20.38■□□□□ 0.85
SP140-213ENST00000543928 ZC3H13Q5T200 1668 aaKnown RBP20.38■□□□□ 0.85
SP140-213ENST00000543928 VWDEQ8N2E2 1590 aa20.38■□□□□ 0.85
SP140-213ENST00000543928 ZMYM3Q14202 1370 aa20.37■□□□□ 0.85
SP140-213ENST00000543928 MROH2AA6NES4 1674 aa20.37■□□□□ 0.85
SP140-213ENST00000543928 NUP155O75694 1391 aa20.36■□□□□ 0.85
SP140-213ENST00000543928 CEBPAP49715 358 aaPredicted RBP20.36■□□□□ 0.85
SP140-213ENST00000543928 RAB3GAP2Q9H2M9 1393 aa20.34■□□□□ 0.85
SP140-213ENST00000543928 C3P01024 1663 aa20.34■□□□□ 0.85
SP140-213ENST00000543928 LMTK2Q8IWU2 1503 aa20.33■□□□□ 0.85
SP140-213ENST00000543928 TRIM52Q96A61 297 aa20.33■□□□□ 0.85
SP140-213ENST00000543928 CAMSAP1Q5T5Y3 1602 aa20.33■□□□□ 0.84
SP140-213ENST00000543928 IQGAP3Q86VI3 1631 aa20.32■□□□□ 0.84
SP140-213ENST00000543928 PZPP20742 1482 aa20.3■□□□□ 0.84
SP140-213ENST00000543928 TET3O43151 1660 aa20.29■□□□□ 0.84
SP140-213ENST00000543928 ACIN1Q9UKV3 1341 aaKnown RBP20.27■□□□□ 0.84
SP140-213ENST00000543928 ARHGAP31Q2M1Z3 1444 aa20.27■□□□□ 0.84
SP140-213ENST00000543928 EFCAB6Q5THR3 1501 aa20.27■□□□□ 0.84
SP140-213ENST00000543928 FBXO31Q5XUX0 539 aaPredicted RBP20.27■□□□□ 0.84
SP140-213ENST00000543928 NPATQ14207 1427 aa20.27■□□□□ 0.83
SP140-213ENST00000543928 HRCP23327 699 aa20.26■□□□□ 0.83
SP140-213ENST00000543928 CFAP65Q6ZU64 1925 aaKnown RBP20.23■□□□□ 0.83
SP140-213ENST00000543928 SLC4A1APQ9BWU0 796 aaKnown RBP20.23■□□□□ 0.83
SP140-213ENST00000543928 PCGF6Q9BYE7 350 aa20.23■□□□□ 0.83
SP140-213ENST00000543928 ERVK-7P63135 1459 aa20.22■□□□□ 0.83
SP140-213ENST00000543928 RPRD2Q5VT52 1461 aaKnown RBP20.22■□□□□ 0.83
SP140-213ENST00000543928 E9PCH4 1651 aa20.22■□□□□ 0.83
SP140-213ENST00000543928 SETD1BQ9UPS6 1966 aaKnown RBP20.21■□□□□ 0.83
SP140-213ENST00000543928 SPATA31D1Q6ZQQ2 1576 aa20.21■□□□□ 0.83
SP140-213ENST00000543928 PREX1Q8TCU6 1659 aa20.2■□□□□ 0.82
SP140-213ENST00000543928 MPHOSPH9Q99550 1183 aa20.2■□□□□ 0.82
SP140-213ENST00000543928 TNRQ92752 1358 aa20.2■□□□□ 0.82
SP140-213ENST00000543928 PKD2Q13563 968 aa20.18■□□□□ 0.82
SP140-213ENST00000543928 NOS1P29475 1434 aa20.17■□□□□ 0.82
SP140-213ENST00000543928 UHRF1BP1Q6BDS2 1440 aa20.15■□□□□ 0.82
SP140-213ENST00000543928 MYO3AQ8NEV4 1616 aa20.14■□□□□ 0.81
SP140-213ENST00000543928 SYNMO15061 1565 aa20.13■□□□□ 0.81
SP140-213ENST00000543928 FOXD1Q16676 465 aa20.13■□□□□ 0.81
SP140-213ENST00000543928 LMTK3Q96Q04 1460 aa20.11■□□□□ 0.81
SP140-213ENST00000543928 NLRP1Q9C000 1473 aa20.11■□□□□ 0.81
SP140-213ENST00000543928 PTPRTO14522 1441 aa20.1■□□□□ 0.81
SP140-213ENST00000543928 SPHKAPQ2M3C7 1700 aa20.1■□□□□ 0.81
SP140-213ENST00000543928 CEP170BQ9Y4F5 1589 aaPredicted RBP20.09■□□□□ 0.81
SP140-213ENST00000543928 A2ML1A8K2U0 1454 aa20.09■□□□□ 0.81
SP140-213ENST00000543928 IDI1Q13907 227 aa20.08■□□□□ 0.81
SP140-213ENST00000543928 SLC52A1Q9NWF4 448 aa20.08■□□□□ 0.81
SP140-213ENST00000543928 UGGT1Q9NYU2 1555 aa20.08■□□□□ 0.8
SP140-213ENST00000543928 ZNF142P52746 1687 aaPredicted RBP20.07■□□□□ 0.8
SP140-213ENST00000543928 PLA2R1Q13018 1463 aa20.07■□□□□ 0.8
SP140-213ENST00000543928 TRPM2O94759 1503 aa20.07■□□□□ 0.8
SP140-213ENST00000543928 PIK3C2BO00750 1634 aa20.05■□□□□ 0.8
SP140-213ENST00000543928 HSPA2P54652 639 aa20.04■□□□□ 0.8
SP140-213ENST00000543928 STAG3Q9UJ98 1225 aa20.02■□□□□ 0.8
SP140-213ENST00000543928 CLTCL1P53675 1640 aa20.02■□□□□ 0.79
SP140-213ENST00000543928 UBR1Q8IWV7 1749 aa20.01■□□□□ 0.79
SP140-213ENST00000543928 DHX57Q6P158 1386 aaKnown RBP20■□□□□ 0.79
SP140-213ENST00000543928 ANKRD30BQ9BXX2 1392 aa20■□□□□ 0.79
SP140-213ENST00000543928 CHGAP10645 457 aaKnown RBP20■□□□□ 0.79
SP140-213ENST00000543928 ADGRB3O60242 1522 aa20■□□□□ 0.79
SP140-213ENST00000543928 THEMISQ8N1K5 641 aaPredicted RBP19.99■□□□□ 0.79
SP140-213ENST00000543928 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
SP140-213ENST00000543928 KDM5AP29375 1690 aaKnown RBP19.97■□□□□ 0.79
SP140-213ENST00000543928 TMEM131LA2VDJ0 1609 aa19.96■□□□□ 0.79
SP140-213ENST00000543928 MYO5BQ9ULV0 1848 aa19.95■□□□□ 0.78
SP140-213ENST00000543928 KIF1BO60333 1816 aa19.94■□□□□ 0.78
SP140-213ENST00000543928 TMEM2Q9UHN6 1383 aa19.92■□□□□ 0.78
SP140-213ENST00000543928 ARHGAP23Q9P227 1491 aa19.91■□□□□ 0.78
SP140-213ENST00000543928 SLIT1O75093 1534 aa19.91■□□□□ 0.78
SP140-213ENST00000543928 ZNF326Q5BKZ1 582 aaKnown RBP19.9■□□□□ 0.78
SP140-213ENST00000543928 ANKLE2Q86XL3 938 aa19.89■□□□□ 0.77
SP140-213ENST00000543928 NCKAP5LQ9HCH0 1330 aa19.89■□□□□ 0.77
SP140-213ENST00000543928 SPATA31E1Q6ZUB1 1445 aa19.88■□□□□ 0.77
SP140-213ENST00000543928 STRCQ7RTU9 1775 aa19.88■□□□□ 0.77
SP140-213ENST00000543928 RIMS2Q9UQ26 1411 aa19.87■□□□□ 0.77
SP140-213ENST00000543928 TXNDC2Q86VQ3 553 aa19.87■□□□□ 0.77
SP140-213ENST00000543928 EID1Q9Y6B2 187 aa19.87■□□□□ 0.77
SP140-213ENST00000543928 ZFYVE9O95405 1425 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms