RNA–Protein interactions for RNA: ENST00000542778.5

NELFA-216, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best) BASIC

Gene NELFA, Length 2,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-216ENST00000542778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.09■■□□□ 1.292e-6■■■■□ 20.4
NELFA-216ENST00000542778 ABCA9Q8IUA7 1624 aa23.08■■□□□ 1.29
NELFA-216ENST00000542778 MAST1Q9Y2H9 1570 aa23.08■■□□□ 1.29
NELFA-216ENST00000542778 PLEKHH2Q8IVE3 1493 aa23.08■■□□□ 1.28
NELFA-216ENST00000542778 CCDC184Q52MB2 194 aa23.07■■□□□ 1.28
NELFA-216ENST00000542778 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
NELFA-216ENST00000542778 NPM1P06748 294 aaKnown RBP eCLIP23.07■■□□□ 1.28
NELFA-216ENST00000542778 WASHC2AQ641Q2 1341 aa23.07■■□□□ 1.28
NELFA-216ENST00000542778 FANCAO15360 1455 aa23.06■■□□□ 1.28
NELFA-216ENST00000542778 CCDC136Q96JN2 1154 aa23.05■■□□□ 1.28
NELFA-216ENST00000542778 NBPF8Q3BBV2 869 aa23.05■■□□□ 1.28
NELFA-216ENST00000542778 CYB5RLQ6IPT4 315 aa23.05■■□□□ 1.28
NELFA-216ENST00000542778 TEX14Q8IWB6 1497 aa23.04■■□□□ 1.28
NELFA-216ENST00000542778 ZBTB47Q9UFB7 747 aaPredicted RBP23.04■■□□□ 1.28
NELFA-216ENST00000542778 PLXNC1O60486 1568 aa23.02■■□□□ 1.28
NELFA-216ENST00000542778 KDM5DQ9BY66 1539 aa23.01■■□□□ 1.27
NELFA-216ENST00000542778 FAM135AQ9P2D6 1515 aa23.01■■□□□ 1.27
NELFA-216ENST00000542778 CNTLNQ9NXG0 1405 aa23■■□□□ 1.27
NELFA-216ENST00000542778 RTN4Q9NQC3 1192 aaKnown RBP23■■□□□ 1.27
NELFA-216ENST00000542778 SPAG9O60271 1321 aaKnown RBP23■■□□□ 1.27
NELFA-216ENST00000542778 ARAP3Q8WWN8 1544 aa22.98■■□□□ 1.27
NELFA-216ENST00000542778 FAM9BQ8IZU0 186 aa22.98■■□□□ 1.27
NELFA-216ENST00000542778 SCAPERQ9BY12 1400 aa22.98■■□□□ 1.27
NELFA-216ENST00000542778 ADGRL1O94910 1474 aa22.97■■□□□ 1.27
NELFA-216ENST00000542778 ZFYVE16Q7Z3T8 1539 aa22.96■■□□□ 1.27
NELFA-216ENST00000542778 HSPA5P11021 654 aaKnown RBP22.96■■□□□ 1.27
NELFA-216ENST00000542778 DUOX2Q9NRD8 1548 aa22.95■■□□□ 1.26
NELFA-216ENST00000542778 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
NELFA-216ENST00000542778 UNC13BO14795 1591 aa22.94■■□□□ 1.26
NELFA-216ENST00000542778 PRKRIP1Q9H875 184 aaPredicted RBP22.93■■□□□ 1.26
NELFA-216ENST00000542778 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
NELFA-216ENST00000542778 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
NELFA-216ENST00000542778 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
NELFA-216ENST00000542778 MRS2Q9HD23 443 aa22.92■■□□□ 1.26
NELFA-216ENST00000542778 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.92■■□□□ 1.26
NELFA-216ENST00000542778 CD109Q6YHK3 1445 aa22.91■■□□□ 1.26
NELFA-216ENST00000542778 UBE2Q2Q8WVN8 375 aa22.91■■□□□ 1.26
NELFA-216ENST00000542778 SMG6Q86US8 1419 aaKnown RBP22.89■■□□□ 1.26
NELFA-216ENST00000542778 ATP7AQ04656 1500 aa22.88■■□□□ 1.25
NELFA-216ENST00000542778 ERBINQ96RT1 1412 aa22.88■■□□□ 1.25
NELFA-216ENST00000542778 PLA2R1Q13018 1463 aa22.88■■□□□ 1.25
NELFA-216ENST00000542778 INO80Q9ULG1 1556 aaPredicted RBP22.87■■□□□ 1.25
NELFA-216ENST00000542778 KDM2AQ9Y2K7 1162 aa22.87■■□□□ 1.25
NELFA-216ENST00000542778 RNF123Q5XPI4 1314 aa22.87■■□□□ 1.25
NELFA-216ENST00000542778 IQGAP3Q86VI3 1631 aa22.86■■□□□ 1.25
NELFA-216ENST00000542778 C11orf95C9JLR9 678 aaPredicted RBP22.86■■□□□ 1.25
NELFA-216ENST00000542778 RTEL1-TNFRSF6BF6WH68 1400 aa22.85■■□□□ 1.25
NELFA-216ENST00000542778 USP35Q9P2H5 1018 aa22.84■■□□□ 1.25
NELFA-216ENST00000542778 WASHC2CQ9Y4E1 1318 aa22.84■■□□□ 1.25
NELFA-216ENST00000542778 EIF4G2P78344 907 aaKnown RBP eCLIP22.84■■□□□ 1.25
NELFA-216ENST00000542778 MAGI2Q86UL8 1455 aa22.84■■□□□ 1.25
NELFA-216ENST00000542778 RGL3Q3MIN7 710 aa22.82■■□□□ 1.24
NELFA-216ENST00000542778 KIDINS220Q9ULH0 1771 aa22.82■■□□□ 1.24
NELFA-216ENST00000542778 CCDC7Q96M83 1385 aa22.81■■□□□ 1.24
NELFA-216ENST00000542778 KIF3BO15066 747 aa22.81■■□□□ 1.24
NELFA-216ENST00000542778 RAPGEF3O95398 923 aa22.81■■□□□ 1.24
NELFA-216ENST00000542778 NEFMP07197 916 aa22.81■■□□□ 1.24
NELFA-216ENST00000542778 DCAF11Q8TEB1 546 aa22.81■■□□□ 1.24
NELFA-216ENST00000542778 NUDCQ9Y266 331 aa22.79■■□□□ 1.24
NELFA-216ENST00000542778 CCDC144AA2RUR9 1427 aa22.77■■□□□ 1.24
NELFA-216ENST00000542778 LAS1LQ9Y4W2 734 aaKnown RBP22.77■■□□□ 1.24
NELFA-216ENST00000542778 E9PCH4 1651 aa22.76■■□□□ 1.23
NELFA-216ENST00000542778 ZNF518AQ6AHZ1 1483 aa22.75■■□□□ 1.23
NELFA-216ENST00000542778 POGZQ7Z3K3 1410 aa22.74■■□□□ 1.23
NELFA-216ENST00000542778 NPM2Q86SE8 214 aaKnown RBP22.73■■□□□ 1.23
NELFA-216ENST00000542778 DHX29Q7Z478 1369 aaKnown RBP22.73■■□□□ 1.23
NELFA-216ENST00000542778 SPATA31E1Q6ZUB1 1445 aa22.72■■□□□ 1.23
NELFA-216ENST00000542778 DEPDC5O75140 1603 aa22.72■■□□□ 1.23
NELFA-216ENST00000542778 MROH1Q8NDA8 1641 aa22.71■■□□□ 1.23
NELFA-216ENST00000542778 FAM69CQ0P6D2 419 aa22.69■■□□□ 1.22
NELFA-216ENST00000542778 KDM5CP41229 1560 aa22.69■■□□□ 1.22
NELFA-216ENST00000542778 MAP3K4Q9Y6R4 1608 aa22.69■■□□□ 1.22
NELFA-216ENST00000542778 PPM1GO15355 546 aaPredicted RBP22.69■■□□□ 1.22
NELFA-216ENST00000542778 POLR1AO95602 1720 aaPredicted RBP22.69■■□□□ 1.22
NELFA-216ENST00000542778 CFAP74Q9C0B2 1584 aa22.68■■□□□ 1.22
NELFA-216ENST00000542778 TSPOAP1O95153 1857 aa22.68■■□□□ 1.22
NELFA-216ENST00000542778 UHRF1BP1Q6BDS2 1440 aa22.67■■□□□ 1.22
NELFA-216ENST00000542778 A2MP01023 1474 aa22.67■■□□□ 1.22
NELFA-216ENST00000542778 BRPF3Q9ULD4 1205 aa22.67■■□□□ 1.22
NELFA-216ENST00000542778 ATP10AO60312 1499 aa22.67■■□□□ 1.22
NELFA-216ENST00000542778 FRMPD1Q5SYB0 1578 aa22.67■■□□□ 1.22
NELFA-216ENST00000542778 USP47Q96K76 1375 aa22.66■■□□□ 1.22
NELFA-216ENST00000542778 ABCA6Q8N139 1617 aa22.66■■□□□ 1.22
NELFA-216ENST00000542778 BCORL1Q5H9F3 1711 aa22.65■■□□□ 1.22
NELFA-216ENST00000542778 TCERG1O14776 1098 aaKnown RBP22.65■■□□□ 1.22
NELFA-216ENST00000542778 HECW2Q9P2P5 1572 aa22.64■■□□□ 1.22
NELFA-216ENST00000542778 VWDEQ8N2E2 1590 aa22.64■■□□□ 1.21
NELFA-216ENST00000542778 NBPF1Q3BBV0 1214 aa22.64■■□□□ 1.21
NELFA-216ENST00000542778 GGT6Q6P531 493 aa22.64■■□□□ 1.21
NELFA-216ENST00000542778 CARD11Q9BXL7 1154 aa22.64■■□□□ 1.21
NELFA-216ENST00000542778 RALGAPBQ86X10 1494 aa22.63■■□□□ 1.21
NELFA-216ENST00000542778 PDE4AP27815 886 aa22.63■■□□□ 1.21
NELFA-216ENST00000542778 KIF7Q2M1P5 1343 aa22.62■■□□□ 1.21
NELFA-216ENST00000542778 CFAP65Q6ZU64 1925 aaKnown RBP22.62■■□□□ 1.21
NELFA-216ENST00000542778 NEO1Q92859 1461 aa22.62■■□□□ 1.21
NELFA-216ENST00000542778 PRDM15P57071 1507 aaPredicted RBP22.62■■□□□ 1.21
NELFA-216ENST00000542778 UGGT1Q9NYU2 1555 aa22.62■■□□□ 1.21
NELFA-216ENST00000542778 MLH3Q9UHC1 1453 aa22.62■■□□□ 1.21
NELFA-216ENST00000542778 DIP2BQ9P265 1576 aa22.62■■□□□ 1.21
NELFA-216ENST00000542778 EIF2AK4Q9P2K8 1649 aaKnown RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms