RNA–Protein interactions for RNA: ENST00000542596.5

ARAP1-216, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, humanhuman

TSL 5

Gene ARAP1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARAP1-216ENST00000542596 PTPRKQ15262 1439 aa22.82■■□□□ 1.24
ARAP1-216ENST00000542596 SHANK2Q9UPX8 1470 aa22.81■■□□□ 1.24
ARAP1-216ENST00000542596 KIF15Q9NS87 1388 aa22.79■■□□□ 1.24
ARAP1-216ENST00000542596 DUOX2Q9NRD8 1548 aa22.79■■□□□ 1.24
ARAP1-216ENST00000542596 CHIC2Q9UKJ5 165 aa22.79■■□□□ 1.24
ARAP1-216ENST00000542596 ANKRD30AQ9BXX3 1397 aa22.78■■□□□ 1.24
ARAP1-216ENST00000542596 KDM5DQ9BY66 1539 aa22.78■■□□□ 1.24
ARAP1-216ENST00000542596 DNMT1P26358 1616 aaKnown RBP22.76■■□□□ 1.23
ARAP1-216ENST00000542596 CROCC2H7BZ55 1655 aa22.76■■□□□ 1.23
ARAP1-216ENST00000542596 FBXO31Q5XUX0 539 aaPredicted RBP22.75■■□□□ 1.23
ARAP1-216ENST00000542596 ILDR1Q86SU0 546 aaPredicted RBP22.75■■□□□ 1.23
ARAP1-216ENST00000542596 EIF2AK4Q9P2K8 1649 aaKnown RBP22.75■■□□□ 1.23
ARAP1-216ENST00000542596 ERBINQ96RT1 1412 aa22.73■■□□□ 1.23
ARAP1-216ENST00000542596 PZPP20742 1482 aa22.73■■□□□ 1.23
ARAP1-216ENST00000542596 PPARGC1BQ86YN6 1023 aaKnown RBP22.72■■□□□ 1.23
ARAP1-216ENST00000542596 RNF17Q9BXT8 1623 aaKnown RBP22.71■■□□□ 1.23
ARAP1-216ENST00000542596 TNRQ92752 1358 aa22.71■■□□□ 1.23
ARAP1-216ENST00000542596 NCOA1Q15788 1441 aa22.7■■□□□ 1.22
ARAP1-216ENST00000542596 STRCQ7RTU9 1775 aa22.69■■□□□ 1.22
ARAP1-216ENST00000542596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.69■■□□□ 1.226e-7■■■□□ 15.9
ARAP1-216ENST00000542596 PTPRTO14522 1441 aa22.68■■□□□ 1.22
ARAP1-216ENST00000542596 KANK1Q14678 1352 aa22.68■■□□□ 1.22
ARAP1-216ENST00000542596 PKD2Q13563 968 aa22.68■■□□□ 1.22
ARAP1-216ENST00000542596 FBXO41Q8TF61 875 aa22.67■■□□□ 1.22
ARAP1-216ENST00000542596 CAMSAP1Q5T5Y3 1602 aa22.67■■□□□ 1.22
ARAP1-216ENST00000542596 MYO3AQ8NEV4 1616 aa22.66■■□□□ 1.22
ARAP1-216ENST00000542596 ABCC3O15438 1527 aa22.66■■□□□ 1.22
ARAP1-216ENST00000542596 A2ML1A8K2U0 1454 aa22.66■■□□□ 1.22
ARAP1-216ENST00000542596 ZC3H13Q5T200 1668 aaKnown RBP22.65■■□□□ 1.22
ARAP1-216ENST00000542596 CEP170BQ9Y4F5 1589 aaPredicted RBP22.65■■□□□ 1.22
ARAP1-216ENST00000542596 NCKAP5LQ9HCH0 1330 aa22.64■■□□□ 1.22
ARAP1-216ENST00000542596 THEMISQ8N1K5 641 aaPredicted RBP22.64■■□□□ 1.21
ARAP1-216ENST00000542596 ADGRL2O95490 1459 aa22.64■■□□□ 1.21
ARAP1-216ENST00000542596 ZNF142P52746 1687 aaPredicted RBP22.63■■□□□ 1.21
ARAP1-216ENST00000542596 CERKQ8TCT0 537 aa22.63■■□□□ 1.21
ARAP1-216ENST00000542596 PLA2R1Q13018 1463 aa22.62■■□□□ 1.21
ARAP1-216ENST00000542596 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.62■■□□□ 1.21
ARAP1-216ENST00000542596 NLRP1Q9C000 1473 aa22.61■■□□□ 1.21
ARAP1-216ENST00000542596 MROH1Q8NDA8 1641 aa22.61■■□□□ 1.21
ARAP1-216ENST00000542596 RRBP1Q9P2E9 1410 aaKnown RBP22.59■■□□□ 1.21
ARAP1-216ENST00000542596 ARHGAP31Q2M1Z3 1444 aa22.58■■□□□ 1.21
ARAP1-216ENST00000542596 PRDM15P57071 1507 aaPredicted RBP22.58■■□□□ 1.21
ARAP1-216ENST00000542596 ANKRD50Q9ULJ7 1429 aa22.57■■□□□ 1.2
ARAP1-216ENST00000542596 ITGAEP38570 1179 aa22.57■■□□□ 1.2
ARAP1-216ENST00000542596 ANKLE2Q86XL3 938 aa22.57■■□□□ 1.2
ARAP1-216ENST00000542596 CEP152O94986 1710 aa22.56■■□□□ 1.2
ARAP1-216ENST00000542596 ERVK-7P63135 1459 aa22.55■■□□□ 1.2
ARAP1-216ENST00000542596 ROCK1Q13464 1354 aa22.55■■□□□ 1.2
ARAP1-216ENST00000542596 CFAP65Q6ZU64 1925 aaKnown RBP22.55■■□□□ 1.2
ARAP1-216ENST00000542596 SPATA31D1Q6ZQQ2 1576 aa22.55■■□□□ 1.2
ARAP1-216ENST00000542596 DEPDC5O75140 1603 aa22.54■■□□□ 1.2
ARAP1-216ENST00000542596 UGGT1Q9NYU2 1555 aa22.53■■□□□ 1.2
ARAP1-216ENST00000542596 LMTK2Q8IWU2 1503 aa22.5■■□□□ 1.19
ARAP1-216ENST00000542596 VWDEQ8N2E2 1590 aa22.47■■□□□ 1.19
ARAP1-216ENST00000542596 STAG3Q9UJ98 1225 aa22.47■■□□□ 1.19
ARAP1-216ENST00000542596 ZNF335Q9H4Z2 1342 aaPredicted RBP22.43■■□□□ 1.18
ARAP1-216ENST00000542596 IDI1Q13907 227 aa22.42■■□□□ 1.18
ARAP1-216ENST00000542596 SLC52A1Q9NWF4 448 aa22.42■■□□□ 1.18
ARAP1-216ENST00000542596 EID1Q9Y6B2 187 aa22.41■■□□□ 1.18
ARAP1-216ENST00000542596 LTBP4Q8N2S1 1624 aa22.41■■□□□ 1.18
ARAP1-216ENST00000542596 POLR1AO95602 1720 aaPredicted RBP22.4■■□□□ 1.18
ARAP1-216ENST00000542596 RPRD2Q5VT52 1461 aaKnown RBP22.4■■□□□ 1.18
ARAP1-216ENST00000542596 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
ARAP1-216ENST00000542596 TXNDC2Q86VQ3 553 aa22.39■■□□□ 1.17
ARAP1-216ENST00000542596 EFCAB6Q5THR3 1501 aa22.39■■□□□ 1.17
ARAP1-216ENST00000542596 MED14O60244 1454 aa22.39■■□□□ 1.17
ARAP1-216ENST00000542596 NUP155O75694 1391 aa22.38■■□□□ 1.17
ARAP1-216ENST00000542596 NOS1P29475 1434 aa22.38■■□□□ 1.17
ARAP1-216ENST00000542596 IQSEC2Q5JU85 1478 aa22.36■■□□□ 1.17
ARAP1-216ENST00000542596 NEURL4Q96JN8 1562 aa22.36■■□□□ 1.17
ARAP1-216ENST00000542596 UBR1Q8IWV7 1749 aa22.36■■□□□ 1.17
ARAP1-216ENST00000542596 UNC13BO14795 1591 aa22.35■■□□□ 1.17
ARAP1-216ENST00000542596 TET3O43151 1660 aa22.34■■□□□ 1.17
ARAP1-216ENST00000542596 LTKP29376 864 aa22.34■■□□□ 1.17
ARAP1-216ENST00000542596 TMEM2Q9UHN6 1383 aa22.32■■□□□ 1.16
ARAP1-216ENST00000542596 SCAF11Q99590 1463 aaKnown RBP22.32■■□□□ 1.16
ARAP1-216ENST00000542596 SLIT1O75093 1534 aa22.31■■□□□ 1.16
ARAP1-216ENST00000542596 PIK3C2BO00750 1634 aa22.31■■□□□ 1.16
ARAP1-216ENST00000542596 ARHGAP23Q9P227 1491 aa22.31■■□□□ 1.16
ARAP1-216ENST00000542596 HDGFP51858 240 aaKnown RBP22.31■■□□□ 1.16
ARAP1-216ENST00000542596 GCC2Q8IWJ2 1684 aa22.3■■□□□ 1.16
ARAP1-216ENST00000542596 SYNMO15061 1565 aa22.29■■□□□ 1.16
ARAP1-216ENST00000542596 KDM5AP29375 1690 aaKnown RBP22.28■■□□□ 1.16
ARAP1-216ENST00000542596 IQGAP1P46940 1657 aa22.28■■□□□ 1.16
ARAP1-216ENST00000542596 NAIPQ13075 1403 aa22.28■■□□□ 1.16
ARAP1-216ENST00000542596 IQGAP3Q86VI3 1631 aa22.28■■□□□ 1.16
ARAP1-216ENST00000542596 CPS1P31327 1500 aa22.27■■□□□ 1.16
ARAP1-216ENST00000542596 HFM1A2PYH4 1435 aa22.26■■□□□ 1.15
ARAP1-216ENST00000542596 UBAP1LF5GYI3 381 aa22.26■■□□□ 1.15
ARAP1-216ENST00000542596 CHGAP10645 457 aaKnown RBP22.26■■□□□ 1.15
ARAP1-216ENST00000542596 TRIM52Q96A61 297 aa22.23■■□□□ 1.15
ARAP1-216ENST00000542596 BCANQ96GW7 911 aa22.23■■□□□ 1.15
ARAP1-216ENST00000542596 ADGRB3O60242 1522 aa22.22■■□□□ 1.15
ARAP1-216ENST00000542596 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.22■■□□□ 1.15
ARAP1-216ENST00000542596 E9PCH4 1651 aa22.22■■□□□ 1.15
ARAP1-216ENST00000542596 TOM1O60784 492 aa22.21■■□□□ 1.15
ARAP1-216ENST00000542596 PPP1R15AO75807 674 aaPredicted RBP22.19■■□□□ 1.14
ARAP1-216ENST00000542596 SLC26A8Q96RN1 970 aa22.16■■□□□ 1.14
ARAP1-216ENST00000542596 RIMS2Q9UQ26 1411 aa22.15■■□□□ 1.14
ARAP1-216ENST00000542596 TMEM131LA2VDJ0 1609 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms