RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.73■□□□□ 0.11
KDM3A-216ENST00000542128 HSPA5P11021 654 aaKnown RBP15.73■□□□□ 0.11
KDM3A-216ENST00000542128 FAM161AQ3B820 660 aa15.73■□□□□ 0.11
KDM3A-216ENST00000542128 MPHOSPH9Q99550 1183 aa15.73■□□□□ 0.11
KDM3A-216ENST00000542128 NGDNQ8NEJ9 315 aaKnown RBP15.72■□□□□ 0.11
KDM3A-216ENST00000542128 PLCB2Q00722 1185 aa15.71■□□□□ 0.11
KDM3A-216ENST00000542128 MTERF4Q7Z6M4 381 aaKnown RBP15.71■□□□□ 0.11
KDM3A-216ENST00000542128 PDCL3Q9H2J4 239 aa15.71■□□□□ 0.1
KDM3A-216ENST00000542128 MAPK8IP3Q9UPT6 1336 aa15.7■□□□□ 0.1
KDM3A-216ENST00000542128 ZNF771Q7L3S4 317 aaPredicted RBP15.7■□□□□ 0.1
KDM3A-216ENST00000542128 SNAPC4Q5SXM2 1469 aa15.69■□□□□ 0.1
KDM3A-216ENST00000542128 MRE11P49959 708 aa15.69■□□□□ 0.1
KDM3A-216ENST00000542128 AFAP1Q8N556 730 aa15.69■□□□□ 0.1
KDM3A-216ENST00000542128 KIAA2012Q0VF49 1180 aa15.69■□□□□ 0.1
KDM3A-216ENST00000542128 HDGFL2Q7Z4V5 671 aaPredicted RBP15.69■□□□□ 0.1
KDM3A-216ENST00000542128 DNMBPQ6XZF7 1577 aa15.69■□□□□ 0.1
KDM3A-216ENST00000542128 PEG3Q9GZU2 1588 aa15.69■□□□□ 0.1
KDM3A-216ENST00000542128 R3HCC1Q9Y3T6 440 aaKnown RBP15.69■□□□□ 0.1
KDM3A-216ENST00000542128 CC2D1BQ5T0F9 858 aaKnown RBP15.68■□□□□ 0.1
KDM3A-216ENST00000542128 WASHC2AQ641Q2 1341 aa15.68■□□□□ 0.1
KDM3A-216ENST00000542128 BACH2Q9BYV9 841 aa15.67■□□□□ 0.1
KDM3A-216ENST00000542128 BBXQ8WY36 941 aaPredicted RBP15.67■□□□□ 0.1
KDM3A-216ENST00000542128 PTMSP20962 102 aa15.67■□□□□ 0.1
KDM3A-216ENST00000542128 SETD5Q9C0A6 1442 aa15.66■□□□□ 0.1
KDM3A-216ENST00000542128 ESPNB1AK53 854 aa15.66■□□□□ 0.1
KDM3A-216ENST00000542128 DDX11L8A8MPP1 907 aa15.65■□□□□ 0.1
KDM3A-216ENST00000542128 KIAA1211Q6ZU35 1233 aa15.65■□□□□ 0.1
KDM3A-216ENST00000542128 RRP1P56182 461 aaKnown RBP15.65■□□□□ 0.1
KDM3A-216ENST00000542128 RAB3GAP2Q9H2M9 1393 aa15.65■□□□□ 0.1
KDM3A-216ENST00000542128 TRAK1Q9UPV9 953 aa15.63■□□□□ 0.09
KDM3A-216ENST00000542128 MORC1Q86VD1 984 aa15.63■□□□□ 0.09
KDM3A-216ENST00000542128 TOP2BQ02880 1626 aa15.63■□□□□ 0.09
KDM3A-216ENST00000542128 PDIA4P13667 645 aaKnown RBP15.62■□□□□ 0.09
KDM3A-216ENST00000542128 PRKRIP1Q9H875 184 aaPredicted RBP15.62■□□□□ 0.09
KDM3A-216ENST00000542128 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
KDM3A-216ENST00000542128 ZNF644Q9H582 1327 aaPredicted RBP15.61■□□□□ 0.09
KDM3A-216ENST00000542128 VGFO15240 615 aaPredicted RBP15.61■□□□□ 0.09
KDM3A-216ENST00000542128 ZHX1Q9UKY1 873 aaPredicted RBP15.61■□□□□ 0.09
KDM3A-216ENST00000542128 RAPGEF3O95398 923 aa15.61■□□□□ 0.09
KDM3A-216ENST00000542128 TPRNQ4KMQ1 711 aa15.6■□□□□ 0.09
KDM3A-216ENST00000542128 ZNF608Q9ULD9 1512 aaPredicted RBP15.59■□□□□ 0.09
KDM3A-216ENST00000542128 CSPP1Q1MSJ5 1256 aa15.59■□□□□ 0.09
KDM3A-216ENST00000542128 CENPQQ7L2Z9 268 aaPredicted RBP15.59■□□□□ 0.09
KDM3A-216ENST00000542128 PRDM10Q9NQV6 1147 aa15.57■□□□□ 0.08
KDM3A-216ENST00000542128 PLIN1O60240 522 aa15.57■□□□□ 0.08
KDM3A-216ENST00000542128 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
KDM3A-216ENST00000542128 APPP05067 770 aa15.55■□□□□ 0.08
KDM3A-216ENST00000542128 ZNF330Q9Y3S2 320 aaPredicted RBP15.55■□□□□ 0.08
KDM3A-216ENST00000542128 ROCK2O75116 1388 aaKnown RBP15.55■□□□□ 0.08
KDM3A-216ENST00000542128 SKOR2Q2VWA4 1001 aaPredicted RBP15.55■□□□□ 0.08
KDM3A-216ENST00000542128 LTV1Q96GA3 475 aaPredicted RBP15.54■□□□□ 0.08
KDM3A-216ENST00000542128 TRAK2O60296 914 aa15.54■□□□□ 0.08
KDM3A-216ENST00000542128 CLCN1P35523 988 aa15.54■□□□□ 0.08
KDM3A-216ENST00000542128 CRBNQ96SW2 442 aa15.54■□□□□ 0.08
KDM3A-216ENST00000542128 TERF2IPQ9NYB0 399 aa15.54■□□□□ 0.08
KDM3A-216ENST00000542128 ABCA10Q8WWZ4 1543 aa15.54■□□□□ 0.08
KDM3A-216ENST00000542128 MAPK8IP2Q13387 824 aaPredicted RBP15.54■□□□□ 0.08
KDM3A-216ENST00000542128 SYNJ2O15056 1496 aa15.53■□□□□ 0.08
KDM3A-216ENST00000542128 CHMP5Q9NZZ3 219 aa15.53■□□□□ 0.08
KDM3A-216ENST00000542128 DDX49Q9Y6V7 483 aaKnown RBP15.53■□□□□ 0.08
KDM3A-216ENST00000542128 MEX3CQ5U5Q3 659 aaKnown RBP15.53■□□□□ 0.08
KDM3A-216ENST00000542128 PDE3BQ13370 1112 aa15.52■□□□□ 0.08
KDM3A-216ENST00000542128 RTF1Q92541 710 aaKnown RBP15.52■□□□□ 0.08
KDM3A-216ENST00000542128 ATF3P18847 181 aa15.52■□□□□ 0.07
KDM3A-216ENST00000542128 MFAP1P55081 439 aaKnown RBP15.52■□□□□ 0.07
KDM3A-216ENST00000542128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.52■□□□□ 0.07
KDM3A-216ENST00000542128 L3MBTL2Q969R5 705 aa15.52■□□□□ 0.07
KDM3A-216ENST00000542128 PRDM2Q13029 1718 aa15.51■□□□□ 0.07
KDM3A-216ENST00000542128 AMPHP49418 695 aa15.51■□□□□ 0.07
KDM3A-216ENST00000542128 AKNAQ7Z591 1439 aa15.5■□□□□ 0.07
KDM3A-216ENST00000542128 GRPEL1Q9HAV7 217 aa15.49■□□□□ 0.07
KDM3A-216ENST00000542128 EVA1CP58658 441 aa15.49■□□□□ 0.07
KDM3A-216ENST00000542128 TXNDC2Q86VQ3 553 aa15.49■□□□□ 0.07
KDM3A-216ENST00000542128 CCDC144AA2RUR9 1427 aa15.49■□□□□ 0.07
KDM3A-216ENST00000542128 NASPP49321 788 aaPredicted RBP15.49■□□□□ 0.07
KDM3A-216ENST00000542128 PRXQ9BXM0 1461 aa15.49■□□□□ 0.07
KDM3A-216ENST00000542128 UQCRHLA0A096LP55 91 aa15.49■□□□□ 0.07
KDM3A-216ENST00000542128 UQCRHP07919 91 aa15.49■□□□□ 0.07
KDM3A-216ENST00000542128 MINK1Q8N4C8 1332 aaPredicted RBP15.49■□□□□ 0.07
KDM3A-216ENST00000542128 PHF23Q9BUL5 403 aaPredicted RBP15.49■□□□□ 0.07
KDM3A-216ENST00000542128 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.48■□□□□ 0.07
KDM3A-216ENST00000542128 BCL11BQ9C0K0 894 aaPredicted RBP15.48■□□□□ 0.07
KDM3A-216ENST00000542128 RRAGDQ9NQL2 400 aaPredicted RBP15.48■□□□□ 0.07
KDM3A-216ENST00000542128 FOXD4L1Q9NU39 408 aa15.48■□□□□ 0.07
KDM3A-216ENST00000542128 FTSJ3Q8IY81 847 aaKnown RBP15.47■□□□□ 0.07
KDM3A-216ENST00000542128 KIF15Q9NS87 1388 aa15.46■□□□□ 0.07
KDM3A-216ENST00000542128 U2AF1L5P0DN76 240 aaPredicted RBP15.46■□□□□ 0.07
KDM3A-216ENST00000542128 U2AF1Q01081 240 aaKnown RBP eCLIP15.46■□□□□ 0.076e-7■□□□□ 10.6
KDM3A-216ENST00000542128 PSME1Q06323 249 aa15.46■□□□□ 0.07
KDM3A-216ENST00000542128 FGD1P98174 961 aa15.46■□□□□ 0.06
KDM3A-216ENST00000542128 PROSER2Q86WR7 435 aaPredicted RBP15.46■□□□□ 0.06
KDM3A-216ENST00000542128 KTN1Q86UP2 1357 aaKnown RBP15.45■□□□□ 0.06
KDM3A-216ENST00000542128 CCDC66A2RUB6 948 aa15.45■□□□□ 0.06
KDM3A-216ENST00000542128 EIF3AQ14152 1382 aaKnown RBP15.45■□□□□ 0.06
KDM3A-216ENST00000542128 MYOM3Q5VTT5 1437 aa15.45■□□□□ 0.06
KDM3A-216ENST00000542128 SCAPERQ9BY12 1400 aa15.45■□□□□ 0.06
KDM3A-216ENST00000542128 THEMISQ8N1K5 641 aaPredicted RBP15.44■□□□□ 0.06
KDM3A-216ENST00000542128 CCDC173Q0VFZ6 552 aa15.44■□□□□ 0.06
KDM3A-216ENST00000542128 ISY1Q9ULR0 285 aaKnown RBP15.44■□□□□ 0.06
KDM3A-216ENST00000542128 KIAA0586Q9BVV6 1533 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms