RNA–Protein interactions for RNA: ENST00000541973.5

RAB6A-209, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB6A, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-209ENST00000541973 POGZQ7Z3K3 1410 aa14.33□□□□□ -0.11
RAB6A-209ENST00000541973 COL17A1Q9UMD9 1497 aaPredicted RBP14.33□□□□□ -0.12
RAB6A-209ENST00000541973 RICTORQ6R327 1708 aa14.33□□□□□ -0.12
RAB6A-209ENST00000541973 SYCP2Q9BX26 1530 aa14.33□□□□□ -0.12
RAB6A-209ENST00000541973 HNRNPMP52272 730 aaKnown RBP eCLIP14.33□□□□□ -0.125e-8■■□□□ 12.5
RAB6A-209ENST00000541973 CREBZFQ9NS37 354 aa14.33□□□□□ -0.12
RAB6A-209ENST00000541973 ARHGEF5Q12774 1597 aa14.32□□□□□ -0.12
RAB6A-209ENST00000541973 RAPGEF3O95398 923 aa14.32□□□□□ -0.12
RAB6A-209ENST00000541973 TSPY4P0CV99 314 aa14.32□□□□□ -0.12
RAB6A-209ENST00000541973 TSPY10P0CW01 314 aa14.32□□□□□ -0.12
RAB6A-209ENST00000541973 FAM50AQ14320 339 aaKnown RBP14.32□□□□□ -0.12
RAB6A-209ENST00000541973 RRBP1Q9P2E9 1410 aaKnown RBP14.32□□□□□ -0.12
RAB6A-209ENST00000541973 MAGI2Q86UL8 1455 aa14.31□□□□□ -0.12
RAB6A-209ENST00000541973 MBD5Q9P267 1494 aa14.31□□□□□ -0.12
RAB6A-209ENST00000541973 ARHGEF12Q9NZN5 1544 aa14.31□□□□□ -0.12
RAB6A-209ENST00000541973 SLC24A1O60721 1099 aa14.31□□□□□ -0.12
RAB6A-209ENST00000541973 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
RAB6A-209ENST00000541973 AFAP1Q8N556 730 aa14.3□□□□□ -0.12
RAB6A-209ENST00000541973 TRAPPC8Q9Y2L5 1435 aa14.3□□□□□ -0.12
RAB6A-209ENST00000541973 CCDC141Q6ZP82 1450 aa14.3□□□□□ -0.12
RAB6A-209ENST00000541973 ZMYM4Q5VZL5 1548 aa14.3□□□□□ -0.12
RAB6A-209ENST00000541973 KDM5CP41229 1560 aa14.3□□□□□ -0.12
RAB6A-209ENST00000541973 SPAG9O60271 1321 aaKnown RBP14.29□□□□□ -0.12
RAB6A-209ENST00000541973 MLH3Q9UHC1 1453 aa14.28□□□□□ -0.12
RAB6A-209ENST00000541973 MYT1LQ9UL68 1186 aa14.28□□□□□ -0.12
RAB6A-209ENST00000541973 FRMPD1Q5SYB0 1578 aa14.27□□□□□ -0.12
RAB6A-209ENST00000541973 RTEL1-TNFRSF6BF6WH68 1400 aa14.27□□□□□ -0.12
RAB6A-209ENST00000541973 DNMT1P26358 1616 aaKnown RBP14.26□□□□□ -0.13
RAB6A-209ENST00000541973 HECW2Q9P2P5 1572 aa14.26□□□□□ -0.13
RAB6A-209ENST00000541973 SHANK2Q9UPX8 1470 aa14.25□□□□□ -0.13
RAB6A-209ENST00000541973 DAPK1P53355 1430 aa14.24□□□□□ -0.13
RAB6A-209ENST00000541973 MAST1Q9Y2H9 1570 aa14.24□□□□□ -0.13
RAB6A-209ENST00000541973 ABCC5O15440 1437 aa14.24□□□□□ -0.13
RAB6A-209ENST00000541973 ATP7AQ04656 1500 aa14.23□□□□□ -0.13
RAB6A-209ENST00000541973 ZFYVE16Q7Z3T8 1539 aa14.23□□□□□ -0.13
RAB6A-209ENST00000541973 CROCC2H7BZ55 1655 aa14.22□□□□□ -0.13
RAB6A-209ENST00000541973 C9orf84Q5VXU9 1444 aa14.22□□□□□ -0.13
RAB6A-209ENST00000541973 KIDINS220Q9ULH0 1771 aa14.22□□□□□ -0.13
RAB6A-209ENST00000541973 INO80Q9ULG1 1556 aaPredicted RBP14.22□□□□□ -0.13
RAB6A-209ENST00000541973 VASPP50552 380 aaPredicted RBP14.21□□□□□ -0.13
RAB6A-209ENST00000541973 ARHGEF40Q8TER5 1519 aa14.2□□□□□ -0.14
RAB6A-209ENST00000541973 ATP10AO60312 1499 aa14.2□□□□□ -0.14
RAB6A-209ENST00000541973 ANKRD30AQ9BXX3 1397 aa14.2□□□□□ -0.14
RAB6A-209ENST00000541973 YEATS2Q9ULM3 1422 aa14.18□□□□□ -0.14
RAB6A-209ENST00000541973 ADGBQ8N7X0 1667 aa14.18□□□□□ -0.14
RAB6A-209ENST00000541973 ROCK1Q13464 1354 aa14.18□□□□□ -0.14
RAB6A-209ENST00000541973 PLXNC1O60486 1568 aa14.17□□□□□ -0.14
RAB6A-209ENST00000541973 REREQ9P2R6 1566 aa14.17□□□□□ -0.14
RAB6A-209ENST00000541973 ITGAEP38570 1179 aa14.17□□□□□ -0.14
RAB6A-209ENST00000541973 ADGRL2O95490 1459 aa14.17□□□□□ -0.14
RAB6A-209ENST00000541973 DIP2CQ9Y2E4 1556 aa14.17□□□□□ -0.14
RAB6A-209ENST00000541973 NCOA1Q15788 1441 aa14.16□□□□□ -0.14
RAB6A-209ENST00000541973 ABCA6Q8N139 1617 aa14.16□□□□□ -0.14
RAB6A-209ENST00000541973 CHIC2Q9UKJ5 165 aa14.16□□□□□ -0.14
RAB6A-209ENST00000541973 A2MP01023 1474 aa14.15□□□□□ -0.14
RAB6A-209ENST00000541973 DHX29Q7Z478 1369 aaKnown RBP14.15□□□□□ -0.14
RAB6A-209ENST00000541973 CLCN6P51797 869 aa14.15□□□□□ -0.14
RAB6A-209ENST00000541973 DUOX2Q9NRD8 1548 aa14.14□□□□□ -0.15
RAB6A-209ENST00000541973 PTPRKQ15262 1439 aa14.14□□□□□ -0.15
RAB6A-209ENST00000541973 KIF15Q9NS87 1388 aa14.13□□□□□ -0.15
RAB6A-209ENST00000541973 ZNF579Q8NAF0 562 aaKnown RBP14.13□□□□□ -0.15
RAB6A-209ENST00000541973 RRP7BPQ9NSQ0 103 aa14.13□□□□□ -0.15
RAB6A-209ENST00000541973 AGLP35573 1532 aa14.12□□□□□ -0.15
RAB6A-209ENST00000541973 MNX1P50219 401 aaPredicted RBP14.12□□□□□ -0.15
RAB6A-209ENST00000541973 TRIM26Q12899 539 aaPredicted RBP14.12□□□□□ -0.15
RAB6A-209ENST00000541973 ARID4BQ4LE39 1312 aaPredicted RBP14.12□□□□□ -0.15
RAB6A-209ENST00000541973 LHX8Q68G74 356 aa14.11□□□□□ -0.15
RAB6A-209ENST00000541973 ERBINQ96RT1 1412 aa14.1□□□□□ -0.15
RAB6A-209ENST00000541973 ACIN1Q9UKV3 1341 aaKnown RBP14.1□□□□□ -0.15
RAB6A-209ENST00000541973 POTEIP0CG38 1075 aa14.09□□□□□ -0.15
RAB6A-209ENST00000541973 IFNLR1Q8IU57 520 aaPredicted RBP14.09□□□□□ -0.15
RAB6A-209ENST00000541973 ZRANB1Q9UGI0 708 aa14.09□□□□□ -0.15
RAB6A-209ENST00000541973 EIF2AK4Q9P2K8 1649 aaKnown RBP14.08□□□□□ -0.15
RAB6A-209ENST00000541973 HFM1A2PYH4 1435 aa14.07□□□□□ -0.16
RAB6A-209ENST00000541973 ANKRD50Q9ULJ7 1429 aa14.07□□□□□ -0.16
RAB6A-209ENST00000541973 BCORL1Q5H9F3 1711 aa14.07□□□□□ -0.16
RAB6A-209ENST00000541973 KIF3BO15066 747 aa14.07□□□□□ -0.16
RAB6A-209ENST00000541973 NAIPQ13075 1403 aa14.05□□□□□ -0.16
RAB6A-209ENST00000541973 GCC2Q8IWJ2 1684 aa14.04□□□□□ -0.16
RAB6A-209ENST00000541973 ESF1Q9H501 851 aaKnown RBP14.04□□□□□ -0.16
RAB6A-209ENST00000541973 SIGLEC1Q9BZZ2 1709 aa14.02□□□□□ -0.16
RAB6A-209ENST00000541973 RNF17Q9BXT8 1623 aaKnown RBP14.02□□□□□ -0.16
RAB6A-209ENST00000541973 FAM135AQ9P2D6 1515 aa14.02□□□□□ -0.16
RAB6A-209ENST00000541973 GGT6Q6P531 493 aa14.02□□□□□ -0.17
RAB6A-209ENST00000541973 SETD5Q9C0A6 1442 aa14.01□□□□□ -0.17
RAB6A-209ENST00000541973 KANK1Q14678 1352 aa14.01□□□□□ -0.17
RAB6A-209ENST00000541973 MLECQ14165 292 aa14.01□□□□□ -0.17
RAB6A-209ENST00000541973 CNTLNQ9NXG0 1405 aa14□□□□□ -0.17
RAB6A-209ENST00000541973 HRCP23327 699 aa14□□□□□ -0.17
RAB6A-209ENST00000541973 ADAMTSL3P82987 1691 aa13.99□□□□□ -0.17
RAB6A-209ENST00000541973 DEPDC5O75140 1603 aa13.99□□□□□ -0.17
RAB6A-209ENST00000541973 WASHC2CQ9Y4E1 1318 aa13.98□□□□□ -0.17
RAB6A-209ENST00000541973 FER1L4A9Z1Z3 1794 aa13.97□□□□□ -0.17
RAB6A-209ENST00000541973 PRDM15P57071 1507 aaPredicted RBP13.97□□□□□ -0.17
RAB6A-209ENST00000541973 UNC13BO14795 1591 aa13.96□□□□□ -0.17
RAB6A-209ENST00000541973 KDM5DQ9BY66 1539 aa13.96□□□□□ -0.17
RAB6A-209ENST00000541973 ZC3H13Q5T200 1668 aaKnown RBP13.96□□□□□ -0.17
RAB6A-209ENST00000541973 NUP155O75694 1391 aa13.95□□□□□ -0.18
RAB6A-209ENST00000541973 MROH1Q8NDA8 1641 aa13.94□□□□□ -0.18
RAB6A-209ENST00000541973 PAK3O75914 559 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms