RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 SEC24BO95487 1268 aa11.7□□□□□ -0.54
AC005840.3-201ENST00000541888 PKD2Q13563 968 aa11.7□□□□□ -0.54
AC005840.3-201ENST00000541888 RRBP1Q9P2E9 1410 aaKnown RBP11.7□□□□□ -0.54
AC005840.3-201ENST00000541888 POTEJP0CG39 1038 aa11.69□□□□□ -0.54
AC005840.3-201ENST00000541888 KCNH8Q96L42 1107 aa11.69□□□□□ -0.54
AC005840.3-201ENST00000541888 RIMBP3CA6NJZ7 1639 aa11.69□□□□□ -0.54
AC005840.3-201ENST00000541888 RIMBP3BA6NNM3 1639 aa11.69□□□□□ -0.54
AC005840.3-201ENST00000541888 RIMBP3Q9UFD9 1639 aa11.69□□□□□ -0.54
AC005840.3-201ENST00000541888 ZNF644Q9H582 1327 aaPredicted RBP11.68□□□□□ -0.54
AC005840.3-201ENST00000541888 TROQ12816 1431 aaPredicted RBP11.68□□□□□ -0.54
AC005840.3-201ENST00000541888 FGD6Q6ZV73 1430 aa11.68□□□□□ -0.54
AC005840.3-201ENST00000541888 RIOK3O14730 519 aaKnown RBP11.67□□□□□ -0.54
AC005840.3-201ENST00000541888 MYOM3Q5VTT5 1437 aa11.67□□□□□ -0.54
AC005840.3-201ENST00000541888 ECM2O94769 699 aaPredicted RBP11.67□□□□□ -0.54
AC005840.3-201ENST00000541888 CYB5RLQ6IPT4 315 aa11.67□□□□□ -0.54
AC005840.3-201ENST00000541888 PLEKHD1A6NEE1 506 aa11.66□□□□□ -0.54
AC005840.3-201ENST00000541888 PTPN23Q9H3S7 1636 aa11.66□□□□□ -0.54
AC005840.3-201ENST00000541888 CDC42BPAQ5VT25 1732 aa11.65□□□□□ -0.54
AC005840.3-201ENST00000541888 IRX5P78411 483 aaPredicted RBP11.65□□□□□ -0.54
AC005840.3-201ENST00000541888 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
AC005840.3-201ENST00000541888 ZNF777Q9ULD5 760 aaPredicted RBP11.65□□□□□ -0.54
AC005840.3-201ENST00000541888 CDK11AQ9UQ88 783 aaPredicted RBP11.65□□□□□ -0.54
AC005840.3-201ENST00000541888 TTC37Q6PGP7 1564 aa11.65□□□□□ -0.54
AC005840.3-201ENST00000541888 GOLGA2Q08379 1002 aa11.64□□□□□ -0.55
AC005840.3-201ENST00000541888 OCEL1Q9H607 264 aa11.63□□□□□ -0.55
AC005840.3-201ENST00000541888 KDM5BQ9UGL1 1544 aa11.62□□□□□ -0.55
AC005840.3-201ENST00000541888 MKRN3Q13064 507 aaKnown RBP11.62□□□□□ -0.55
AC005840.3-201ENST00000541888 CHIC2Q9UKJ5 165 aa11.62□□□□□ -0.55
AC005840.3-201ENST00000541888 PTPRKQ15262 1439 aa11.61□□□□□ -0.55
AC005840.3-201ENST00000541888 UHRF1BP1LA0JNW5 1464 aa11.61□□□□□ -0.55
AC005840.3-201ENST00000541888 PLCG2P16885 1265 aa11.61□□□□□ -0.55
AC005840.3-201ENST00000541888 CABP2Q9NPB3 220 aa11.61□□□□□ -0.55
AC005840.3-201ENST00000541888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.61□□□□□ -0.55
AC005840.3-201ENST00000541888 VGFO15240 615 aaPredicted RBP11.6□□□□□ -0.55
AC005840.3-201ENST00000541888 CDC42BPBQ9Y5S2 1711 aa11.6□□□□□ -0.55
AC005840.3-201ENST00000541888 ABCC10Q5T3U5 1492 aa11.6□□□□□ -0.55
AC005840.3-201ENST00000541888 GPATCH8Q9UKJ3 1502 aaKnown RBP11.6□□□□□ -0.55
AC005840.3-201ENST00000541888 ITSN2Q9NZM3 1697 aa11.59□□□□□ -0.55
AC005840.3-201ENST00000541888 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
AC005840.3-201ENST00000541888 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
AC005840.3-201ENST00000541888 CFDP1Q9UEE9 299 aaPredicted RBP11.58□□□□□ -0.56
AC005840.3-201ENST00000541888 CAMSAP2Q08AD1 1489 aa11.58□□□□□ -0.56
AC005840.3-201ENST00000541888 RGL2O15211 777 aa11.58□□□□□ -0.56
AC005840.3-201ENST00000541888 ASXL2Q76L83 1435 aa11.57□□□□□ -0.56
AC005840.3-201ENST00000541888 MAMSTRQ6ZN01 415 aa11.57□□□□□ -0.56
AC005840.3-201ENST00000541888 CCER1Q8TC90 406 aaPredicted RBP11.57□□□□□ -0.56
AC005840.3-201ENST00000541888 MYO5CQ9NQX4 1742 aa11.56□□□□□ -0.56
AC005840.3-201ENST00000541888 RRP7BPQ9NSQ0 103 aa11.56□□□□□ -0.56
AC005840.3-201ENST00000541888 PREX2Q70Z35 1606 aa11.56□□□□□ -0.56
AC005840.3-201ENST00000541888 WDR7Q9Y4E6 1490 aa11.55□□□□□ -0.56
AC005840.3-201ENST00000541888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.56
AC005840.3-201ENST00000541888 TCOF1Q13428 1488 aaKnown RBP11.55□□□□□ -0.56
AC005840.3-201ENST00000541888 SAMD9LQ8IVG5 1584 aa11.54□□□□□ -0.56
AC005840.3-201ENST00000541888 ARHGAP5Q13017 1502 aa11.54□□□□□ -0.56
AC005840.3-201ENST00000541888 PDCD7Q8N8D1 485 aaKnown RBP11.54□□□□□ -0.56
AC005840.3-201ENST00000541888 HNRNPMP52272 730 aaKnown RBP eCLIP11.53□□□□□ -0.56
AC005840.3-201ENST00000541888 TAOK2Q9UL54 1235 aa11.53□□□□□ -0.56
AC005840.3-201ENST00000541888 RAB3GAP2Q9H2M9 1393 aa11.53□□□□□ -0.56
AC005840.3-201ENST00000541888 KDM6BO15054 1643 aa11.53□□□□□ -0.56
AC005840.3-201ENST00000541888 ILDR1Q86SU0 546 aaPredicted RBP11.53□□□□□ -0.56
AC005840.3-201ENST00000541888 EFCAB3Q8N7B9 438 aa11.53□□□□□ -0.56
AC005840.3-201ENST00000541888 SCUBE2Q9NQ36 999 aa11.53□□□□□ -0.56
AC005840.3-201ENST00000541888 MIA2Q96PC5 1412 aa11.53□□□□□ -0.56
AC005840.3-201ENST00000541888 DNMT1P26358 1616 aaKnown RBP11.52□□□□□ -0.57
AC005840.3-201ENST00000541888 DAPK1P53355 1430 aa11.51□□□□□ -0.57
AC005840.3-201ENST00000541888 ABCC5O15440 1437 aa11.51□□□□□ -0.57
AC005840.3-201ENST00000541888 SYCP2Q9BX26 1530 aa11.51□□□□□ -0.57
AC005840.3-201ENST00000541888 CROCC2H7BZ55 1655 aa11.5□□□□□ -0.57
AC005840.3-201ENST00000541888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.49□□□□□ -0.57
AC005840.3-201ENST00000541888 BCL11BQ9C0K0 894 aaPredicted RBP11.49□□□□□ -0.57
AC005840.3-201ENST00000541888 SETD5Q9C0A6 1442 aa11.48□□□□□ -0.57
AC005840.3-201ENST00000541888 ABCA9Q8IUA7 1624 aa11.48□□□□□ -0.57
AC005840.3-201ENST00000541888 TSPOAP1O95153 1857 aa11.48□□□□□ -0.57
AC005840.3-201ENST00000541888 ARHGEF12Q9NZN5 1544 aa11.47□□□□□ -0.57
AC005840.3-201ENST00000541888 DPY19L2Q6NUT2 758 aa11.47□□□□□ -0.57
AC005840.3-201ENST00000541888 NAIPQ13075 1403 aa11.46□□□□□ -0.57
AC005840.3-201ENST00000541888 STK25O00506 426 aa11.46□□□□□ -0.58
AC005840.3-201ENST00000541888 STK24Q9Y6E0 443 aa11.46□□□□□ -0.58
AC005840.3-201ENST00000541888 PLCH2O75038 1416 aa11.45□□□□□ -0.58
AC005840.3-201ENST00000541888 GCC2Q8IWJ2 1684 aa11.45□□□□□ -0.58
AC005840.3-201ENST00000541888 DHX57Q6P158 1386 aaKnown RBP11.45□□□□□ -0.58
AC005840.3-201ENST00000541888 ADGBQ8N7X0 1667 aa11.44□□□□□ -0.58
AC005840.3-201ENST00000541888 MBD5Q9P267 1494 aa11.44□□□□□ -0.58
AC005840.3-201ENST00000541888 HFM1A2PYH4 1435 aa11.44□□□□□ -0.58
AC005840.3-201ENST00000541888 FANCAO15360 1455 aa11.44□□□□□ -0.58
AC005840.3-201ENST00000541888 SOX12O15370 315 aa11.44□□□□□ -0.58
AC005840.3-201ENST00000541888 L3MBTL3Q96JM7 780 aaPredicted RBP11.43□□□□□ -0.58
AC005840.3-201ENST00000541888 AFAP1Q8N556 730 aa11.42□□□□□ -0.58
AC005840.3-201ENST00000541888 C9orf84Q5VXU9 1444 aa11.42□□□□□ -0.58
AC005840.3-201ENST00000541888 TRAPPC8Q9Y2L5 1435 aa11.42□□□□□ -0.58
AC005840.3-201ENST00000541888 MAPKBP1O60336 1514 aa11.42□□□□□ -0.58
AC005840.3-201ENST00000541888 ABCC1P33527 1531 aa11.42□□□□□ -0.58
AC005840.3-201ENST00000541888 AKNAQ7Z591 1439 aa11.41□□□□□ -0.58
AC005840.3-201ENST00000541888 CD109Q6YHK3 1445 aa11.41□□□□□ -0.58
AC005840.3-201ENST00000541888 FAM69CQ0P6D2 419 aa11.4□□□□□ -0.58
AC005840.3-201ENST00000541888 EFCAB2Q5VUJ9 269 aa11.4□□□□□ -0.58
AC005840.3-201ENST00000541888 CCDC141Q6ZP82 1450 aa11.4□□□□□ -0.58
AC005840.3-201ENST00000541888 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.59
AC005840.3-201ENST00000541888 ARHGEF5Q12774 1597 aa11.4□□□□□ -0.59
AC005840.3-201ENST00000541888 DIP2BQ9P265 1576 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms