RNA–Protein interactions for RNA: ENST00000540667.5

PTMS-204, Transcript of parathymosin, humanhuman

TSL 2

Gene PTMS, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-204ENST00000540667 SYCP2Q9BX26 1530 aa22.58■■□□□ 1.21
PTMS-204ENST00000540667 ADGBQ8N7X0 1667 aa22.55■■□□□ 1.2
PTMS-204ENST00000540667 TNRQ92752 1358 aa22.55■■□□□ 1.2
PTMS-204ENST00000540667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.55■■□□□ 1.28e-7■■■■□ 22.6
PTMS-204ENST00000540667 ARHGAP35Q9NRY4 1499 aa22.53■■□□□ 1.2
PTMS-204ENST00000540667 THEMISQ8N1K5 641 aaPredicted RBP22.52■■□□□ 1.2
PTMS-204ENST00000540667 PZPP20742 1482 aa22.5■■□□□ 1.19
PTMS-204ENST00000540667 UGGT1Q9NYU2 1555 aa22.5■■□□□ 1.19
PTMS-204ENST00000540667 KIAA1107Q9UPP5 1409 aa22.48■■□□□ 1.19
PTMS-204ENST00000540667 NLRP1Q9C000 1473 aa22.48■■□□□ 1.19
PTMS-204ENST00000540667 XIRP1Q702N8 1843 aaKnown RBP22.47■■□□□ 1.19
PTMS-204ENST00000540667 FAM135AQ9P2D6 1515 aa22.47■■□□□ 1.19
PTMS-204ENST00000540667 HNRNPMP52272 730 aaKnown RBP eCLIP22.47■■□□□ 1.19
PTMS-204ENST00000540667 FBXO31Q5XUX0 539 aaPredicted RBP22.47■■□□□ 1.19
PTMS-204ENST00000540667 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
PTMS-204ENST00000540667 ZNF777Q9ULD5 760 aaPredicted RBP22.46■■□□□ 1.19
PTMS-204ENST00000540667 ZC3H13Q5T200 1668 aaKnown RBP22.46■■□□□ 1.19
PTMS-204ENST00000540667 FAM135BQ49AJ0 1406 aa22.45■■□□□ 1.18
PTMS-204ENST00000540667 CCDC18Q5T9S5 1454 aa22.45■■□□□ 1.18
PTMS-204ENST00000540667 PLEKHH2Q8IVE3 1493 aa22.44■■□□□ 1.18
PTMS-204ENST00000540667 GPATCH8Q9UKJ3 1502 aaKnown RBP22.43■■□□□ 1.18
PTMS-204ENST00000540667 MIA2Q96PC5 1412 aa22.42■■□□□ 1.18
PTMS-204ENST00000540667 UPF1Q92900 1129 aaKnown RBP eCLIP22.42■■□□□ 1.182e-9■■□□□ 13.8
PTMS-204ENST00000540667 KDM5DQ9BY66 1539 aa22.41■■□□□ 1.18
PTMS-204ENST00000540667 SRCAPQ6ZRS2 3230 aa22.35■■□□□ 1.17
PTMS-204ENST00000540667 ROBO1Q9Y6N7 1651 aa22.35■■□□□ 1.17
PTMS-204ENST00000540667 DHX29Q7Z478 1369 aaKnown RBP22.35■■□□□ 1.17
PTMS-204ENST00000540667 CASKIN1Q8WXD9 1431 aa22.34■■□□□ 1.17
PTMS-204ENST00000540667 RTEL1-TNFRSF6BF6WH68 1400 aa22.31■■□□□ 1.16
PTMS-204ENST00000540667 CFDP1Q9UEE9 299 aaPredicted RBP22.29■■□□□ 1.16
PTMS-204ENST00000540667 WASHC2CQ9Y4E1 1318 aa22.29■■□□□ 1.16
PTMS-204ENST00000540667 KIF3BO15066 747 aa22.27■■□□□ 1.16
PTMS-204ENST00000540667 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
PTMS-204ENST00000540667 UBR1Q8IWV7 1749 aa22.26■■□□□ 1.15
PTMS-204ENST00000540667 SCAF11Q99590 1463 aaKnown RBP22.26■■□□□ 1.15
PTMS-204ENST00000540667 MBD5Q9P267 1494 aa22.25■■□□□ 1.15
PTMS-204ENST00000540667 LRRC9Q6ZRR7 1453 aa22.23■■□□□ 1.15
PTMS-204ENST00000540667 JCADQ9P266 1359 aa22.23■■□□□ 1.15
PTMS-204ENST00000540667 PHLPP1O60346 1717 aa22.23■■□□□ 1.15
PTMS-204ENST00000540667 CCNB3Q8WWL7 1395 aa22.21■■□□□ 1.15
PTMS-204ENST00000540667 FYCO1Q9BQS8 1478 aa22.2■■□□□ 1.14
PTMS-204ENST00000540667 ARHGAP23Q9P227 1491 aa22.2■■□□□ 1.14
PTMS-204ENST00000540667 SLIT1O75093 1534 aa22.2■■□□□ 1.14
PTMS-204ENST00000540667 MAP3K1Q13233 1512 aa22.19■■□□□ 1.14
PTMS-204ENST00000540667 TMEM94Q12767 1356 aa22.18■■□□□ 1.14
PTMS-204ENST00000540667 ZNF772Q68DY9 489 aaPredicted RBP22.18■■□□□ 1.14
PTMS-204ENST00000540667 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
PTMS-204ENST00000540667 ERVK-7P63135 1459 aa22.16■■□□□ 1.14
PTMS-204ENST00000540667 NCOA2Q15596 1464 aa22.16■■□□□ 1.14
PTMS-204ENST00000540667 LTKP29376 864 aa22.16■■□□□ 1.14
PTMS-204ENST00000540667 CDK12Q9NYV4 1490 aaPredicted RBP22.15■■□□□ 1.14
PTMS-204ENST00000540667 LRP6O75581 1613 aa22.15■■□□□ 1.14
PTMS-204ENST00000540667 COL16A1Q07092 1604 aaPredicted RBP22.14■■□□□ 1.14
PTMS-204ENST00000540667 ZNF644Q9H582 1327 aaPredicted RBP22.14■■□□□ 1.14
PTMS-204ENST00000540667 ABCC3O15438 1527 aa22.13■■□□□ 1.13
PTMS-204ENST00000540667 TXNDC2Q86VQ3 553 aa22.13■■□□□ 1.13
PTMS-204ENST00000540667 EHMT2Q96KQ7 1210 aa22.12■■□□□ 1.13
PTMS-204ENST00000540667 TIAM1Q13009 1591 aa22.11■■□□□ 1.13
PTMS-204ENST00000540667 SPATA31A6Q5VVP1 1343 aa22.1■■□□□ 1.13
PTMS-204ENST00000540667 FGD6Q6ZV73 1430 aa22.09■■□□□ 1.13
PTMS-204ENST00000540667 CCDC141Q6ZP82 1450 aa22.09■■□□□ 1.13
PTMS-204ENST00000540667 PRDM15P57071 1507 aaPredicted RBP22.08■■□□□ 1.13
PTMS-204ENST00000540667 RXRBP28702 533 aa22.08■■□□□ 1.13
PTMS-204ENST00000540667 KCNA6P17658 529 aa22.07■■□□□ 1.12
PTMS-204ENST00000540667 CFAP65Q6ZU64 1925 aaKnown RBP22.07■■□□□ 1.12
PTMS-204ENST00000540667 SHPRHQ149N8 1683 aa22.06■■□□□ 1.12
PTMS-204ENST00000540667 CAMSAP2Q08AD1 1489 aa22.05■■□□□ 1.12
PTMS-204ENST00000540667 MEX3CQ5U5Q3 659 aaKnown RBP22.05■■□□□ 1.12
PTMS-204ENST00000540667 EID1Q9Y6B2 187 aa22.05■■□□□ 1.12
PTMS-204ENST00000540667 NWD1Q149M9 1564 aa22.04■■□□□ 1.12
PTMS-204ENST00000540667 NKTRP30414 1462 aaKnown RBP22.04■■□□□ 1.12
PTMS-204ENST00000540667 PROSER2Q86WR7 435 aaPredicted RBP22.04■■□□□ 1.12
PTMS-204ENST00000540667 SLAIN2Q9P270 581 aa22.04■■□□□ 1.12
PTMS-204ENST00000540667 MSH6P52701 1360 aa22.02■■□□□ 1.12
PTMS-204ENST00000540667 CEP152O94986 1710 aa22.02■■□□□ 1.12
PTMS-204ENST00000540667 TET3O43151 1660 aa22.01■■□□□ 1.11
PTMS-204ENST00000540667 RSPH4AQ5TD94 716 aa22.01■■□□□ 1.11
PTMS-204ENST00000540667 MROH1Q8NDA8 1641 aa22■■□□□ 1.11
PTMS-204ENST00000540667 EIF2AK4Q9P2K8 1649 aaKnown RBP22■■□□□ 1.11
PTMS-204ENST00000540667 RBM33Q96EV2 1170 aaKnown RBP22■■□□□ 1.11
PTMS-204ENST00000540667 MTUS2Q5JR59 1369 aa21.99■■□□□ 1.11
PTMS-204ENST00000540667 TMEM2Q9UHN6 1383 aa21.99■■□□□ 1.11
PTMS-204ENST00000540667 PIK3C2BO00750 1634 aa21.98■■□□□ 1.11
PTMS-204ENST00000540667 KDM5AP29375 1690 aaKnown RBP21.98■■□□□ 1.11
PTMS-204ENST00000540667 AHDC1Q5TGY3 1603 aaPredicted RBP21.97■■□□□ 1.11
PTMS-204ENST00000540667 ARHGEF5Q12774 1597 aa21.95■■□□□ 1.1
PTMS-204ENST00000540667 RGS12O14924 1447 aa21.94■■□□□ 1.1
PTMS-204ENST00000540667 EHBP1L1Q8N3D4 1523 aa21.93■■□□□ 1.1
PTMS-204ENST00000540667 ARHGAP31Q2M1Z3 1444 aa21.92■■□□□ 1.1
PTMS-204ENST00000540667 CEP162Q5TB80 1403 aa21.91■■□□□ 1.1
PTMS-204ENST00000540667 SLC26A8Q96RN1 970 aa21.91■■□□□ 1.1
PTMS-204ENST00000540667 FOXD1Q16676 465 aa21.9■■□□□ 1.1
PTMS-204ENST00000540667 DIP2AQ14689 1571 aa21.9■■□□□ 1.1
PTMS-204ENST00000540667 EFCAB6Q5THR3 1501 aa21.9■■□□□ 1.1
PTMS-204ENST00000540667 ZRANB1Q9UGI0 708 aa21.89■■□□□ 1.09
PTMS-204ENST00000540667 SETBP1Q9Y6X0 1596 aa21.89■■□□□ 1.09
PTMS-204ENST00000540667 AFF2P51816 1311 aa21.88■■□□□ 1.09
PTMS-204ENST00000540667 CHD2O14647 1828 aaKnown RBP21.88■■□□□ 1.09
PTMS-204ENST00000540667 MAST1Q9Y2H9 1570 aa21.87■■□□□ 1.09
PTMS-204ENST00000540667 TSPY4P0CV99 314 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms