RNA–Protein interactions for RNA: ENST00000540667.5

PTMS-204, Transcript of parathymosin, humanhuman

TSL 2

Gene PTMS, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-204ENST00000540667 PCBP1Q15365 356 aaKnown RBP eCLIP14.92□□□□□ -0.029e-66■■■■■ 27.6
PTMS-204ENST00000540667 DDX3XO00571 662 aaKnown RBP eCLIP13.85□□□□□ -0.193e-31■■■■■ 38.5
PTMS-204ENST00000540667 YBX3P16989 372 aaKnown RBP eCLIP20.11■□□□□ 0.813e-27■□□□□ 8.2
PTMS-204ENST00000540667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.33□□□□□ -0.281e-18■□□□□ 10.2
PTMS-204ENST00000540667 PABPC4Q13310 644 aaKnown RBP eCLIP17■□□□□ 0.311e-17■■■■□ 20.9
PTMS-204ENST00000540667 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.09■□□□□ 0.172e-17■□□□□ 10.8
PTMS-204ENST00000540667 PCBP2Q15366 365 aaKnown RBP eCLIP12.73□□□□□ -0.374e-17■■■■■ 29.6
PTMS-204ENST00000540667 PPIGQ13427 754 aaKnown RBP eCLIP16.75■□□□□ 0.276e-17■■■■□ 23.4
PTMS-204ENST00000540667 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.91□□□□□ -0.184e-15■■■■■ 54.9
PTMS-204ENST00000540667 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.14□□□□□ -0.315e-15■□□□□ 10.1
PTMS-204ENST00000540667 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.49■□□□□ 0.399e-15■■■■□ 21.6
PTMS-204ENST00000540667 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.26□□□□□ -0.139e-14■□□□□ 10.7
PTMS-204ENST00000540667 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.82■□□□□ 0.282e-13■■■□□ 14.6
PTMS-204ENST00000540667 CPSF6Q16630 551 aaKnown RBP eCLIP12.63□□□□□ -0.396e-13■■■□□ 18.9
PTMS-204ENST00000540667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.57■■□□□ 1.046e-13■■■□□ 15.2
PTMS-204ENST00000540667 LARP4Q71RC2 724 aaKnown RBP eCLIP12.33□□□□□ -0.442e-12■■■■■ 31.5
PTMS-204ENST00000540667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.343e-12■■■■□ 19.8
PTMS-204ENST00000540667 ZNF622Q969S3 477 aaKnown RBP eCLIP18.79■□□□□ 0.63e-12■■■□□ 18.3
PTMS-204ENST00000540667 SRSF1Q07955 248 aaKnown RBP eCLIP14.79□□□□□ -0.047e-11■■■■□ 20.7
PTMS-204ENST00000540667 SF3B4Q15427 424 aaKnown RBP eCLIP12.32□□□□□ -0.443e-10■■■■□ 21
PTMS-204ENST00000540667 ZC3H11AO75152 810 aaKnown RBP eCLIP15.34■□□□□ 0.056e-10■□□□□ 11.3
PTMS-204ENST00000540667 EFTUD2Q15029 972 aaKnown RBP eCLIP12.88□□□□□ -0.357e-10■■■■■ 51.8
PTMS-204ENST00000540667 PABPN1Q86U42 306 aaKnown RBP eCLIP30.56■■■□□ 2.481e-9■□□□□ 8.1
PTMS-204ENST00000540667 FTOQ9C0B1 505 aaKnown RBP eCLIP16.29■□□□□ 0.22e-9■■■□□ 15.5
PTMS-204ENST00000540667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.99■□□□□ 0.632e-9■□□□□ 10.7
PTMS-204ENST00000540667 UPF1Q92900 1129 aaKnown RBP eCLIP22.42■■□□□ 1.182e-9■■□□□ 13.8
PTMS-204ENST00000540667 XRCC6P12956 609 aaKnown RBP eCLIP14.91□□□□□ -0.022e-9■□□□□ 10.4
PTMS-204ENST00000540667 AGGF1Q8N302 714 aaeCLIP13.09□□□□□ -0.318e-9■■■■□ 20.9
PTMS-204ENST00000540667 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.89□□□□□ -0.199e-9■□□□□ 10.4
PTMS-204ENST00000540667 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.26□□□□□ -0.291e-8■□□□□ 9.5
PTMS-204ENST00000540667 AARSP49588 968 aaKnown RBP eCLIP14.55□□□□□ -0.082e-8■□□□□ 8.7
PTMS-204ENST00000540667 TRA2AQ13595 282 aaKnown RBP eCLIP13.61□□□□□ -0.232e-8■■■■■ 33.7
PTMS-204ENST00000540667 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.41□□□□□ -0.422e-8■■□□□ 12.7
PTMS-204ENST00000540667 PUM1Q14671 1186 aaKnown RBP eCLIP16.04■□□□□ 0.162e-8■□□□□ 11.1
PTMS-204ENST00000540667 EIF4G2P78344 907 aaKnown RBP eCLIP18.7■□□□□ 0.584e-8■■■■□ 19.3
PTMS-204ENST00000540667 IGF2BP3O00425 579 aaKnown RBP eCLIP17.88■□□□□ 0.454e-8■□□□□ 9.4
PTMS-204ENST00000540667 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.79□□□□□ -0.364e-8■■□□□ 12.9
PTMS-204ENST00000540667 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.13□□□□□ -0.475e-8■□□□□ 10.6
PTMS-204ENST00000540667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.29□□□□□ -0.126e-8■■■■■ 57.6
PTMS-204ENST00000540667 WRNQ14191 1432 aaPredicted RBP eCLIP25.01■■□□□ 1.597e-8■■■■■ 32.7
PTMS-204ENST00000540667 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.18■□□□□ 0.027e-8■■■□□ 18.1
PTMS-204ENST00000540667 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.4□□□□□ -0.421e-7■■■■□ 23.5
PTMS-204ENST00000540667 PTBP1P26599 531 aaKnown RBP eCLIP10.44□□□□□ -0.741e-7■■□□□ 12.1
PTMS-204ENST00000540667 AQRO60306 1485 aaKnown RBP eCLIP26.29■■□□□ 1.81e-7■■■□□ 18.9
PTMS-204ENST00000540667 FXR2P51116 673 aaKnown RBP eCLIP14.94□□□□□ -0.021e-7■■□□□ 13.8
PTMS-204ENST00000540667 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.9□□□□□ -0.341e-7■■■□□ 18.3
PTMS-204ENST00000540667 GPKOWQ92917 476 aaPredicted RBP eCLIP15.59■□□□□ 0.092e-7■■■■□ 22.1
PTMS-204ENST00000540667 EWSR1Q01844 656 aaKnown RBP eCLIP10.17□□□□□ -0.783e-7■□□□□ 10.1
PTMS-204ENST00000540667 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.94□□□□□ -0.183e-7■■■■■ 34.2
PTMS-204ENST00000540667 SRSF7Q16629 238 aaKnown RBP eCLIP10.7□□□□□ -0.73e-7■□□□□ 10.9
PTMS-204ENST00000540667 G3BP1Q13283 466 aaKnown RBP eCLIP16.56■□□□□ 0.244e-7■■■■□ 21.3
PTMS-204ENST00000540667 RBM22Q9NW64 420 aaKnown RBP eCLIP13.5□□□□□ -0.254e-7■■□□□ 11.6
PTMS-204ENST00000540667 DDX6P26196 483 aaKnown RBP eCLIP14.61□□□□□ -0.075e-7■□□□□ 10.7
PTMS-204ENST00000540667 RBM15Q96T37 977 aaKnown RBP eCLIP13.58□□□□□ -0.246e-7■□□□□ 10.9
PTMS-204ENST00000540667 WDR43Q15061 677 aaKnown RBP eCLIP17.72■□□□□ 0.437e-7■■■■□ 21.9
PTMS-204ENST00000540667 PRPF4O43172 522 aaKnown RBP eCLIP12.69□□□□□ -0.387e-7■■■■□ 19.7
PTMS-204ENST00000540667 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.46□□□□□ -0.417e-7■■□□□ 13.6
PTMS-204ENST00000540667 NONOQ15233 471 aaKnown RBP eCLIP15.55■□□□□ 0.087e-7■■■■□ 19.8
PTMS-204ENST00000540667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.55■■□□□ 1.28e-7■■■■□ 22.6
PTMS-204ENST00000540667 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.98□□□□□ -0.179e-7■■■□□ 16.3
PTMS-204ENST00000540667 MATR3P43243 847 aaKnown RBP eCLIP14.62□□□□□ -0.079e-7■■□□□ 13.9
PTMS-204ENST00000540667 RPS3P23396 243 aaKnown RBP eCLIP13.05□□□□□ -0.329e-7■■□□□ 12.1
PTMS-204ENST00000540667 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.18■□□□□ 0.181e-6■■□□□ 11.9
PTMS-204ENST00000540667 TIAL1Q01085 375 aaKnown RBP eCLIP12.93□□□□□ -0.341e-6■■□□□ 13.3
PTMS-204ENST00000540667 SF3A3Q12874 501 aaKnown RBP eCLIP12.17□□□□□ -0.461e-6■■□□□ 11.7
PTMS-204ENST00000540667 RBM5P52756 815 aaKnown RBP eCLIP17.38■□□□□ 0.371e-6■■■■□ 23.8
PTMS-204ENST00000540667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.31■□□□□ 0.22e-6■■■□□ 18.6
PTMS-204ENST00000540667 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.19□□□□□ -0.463e-6■■□□□ 12.3
PTMS-204ENST00000540667 TARDBPQ13148 414 aaKnown RBP eCLIP14.45□□□□□ -0.13e-6■■□□□ 13.1
PTMS-204ENST00000540667 SF3B1O75533 1304 aaKnown RBP eCLIP15.01□□□□□ -0.013e-6■■■■■ 44.6
PTMS-204ENST00000540667 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.39■□□□□ 0.053e-6■■■□□ 15.3
PTMS-204ENST00000540667 GTF2F1P35269 517 aaKnown RBP eCLIP16.05■□□□□ 0.164e-6■■■□□ 18.9
PTMS-204ENST00000540667 NKRFO15226 690 aaKnown RBP eCLIP16.05■□□□□ 0.164e-6■■■□□ 18.3
PTMS-204ENST00000540667 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.35□□□□□ -0.594e-6■■□□□ 13.2
PTMS-204ENST00000540667 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.73■□□□□ 0.434e-6■■■■□ 20.2
PTMS-204ENST00000540667 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.85□□□□□ -0.515e-6■□□□□ 8.8
Retrieved 76 of 76 RNA–protein pairs in 15.7 ms