RNA–Protein interactions for RNA: ENST00000540430.5

LDHA-218, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-218ENST00000540430 ADGBQ8N7X0 1667 aa13.24□□□□□ -0.29
LDHA-218ENST00000540430 ZMYM3Q14202 1370 aa13.24□□□□□ -0.29
LDHA-218ENST00000540430 RTEL1-TNFRSF6BF6WH68 1400 aa13.22□□□□□ -0.29
LDHA-218ENST00000540430 PTPRTO14522 1441 aa13.22□□□□□ -0.29
LDHA-218ENST00000540430 PPP6R1Q9UPN7 881 aa13.22□□□□□ -0.29
LDHA-218ENST00000540430 NCOA2Q15596 1464 aa13.22□□□□□ -0.29
LDHA-218ENST00000540430 CLTCQ00610 1675 aaKnown RBP13.21□□□□□ -0.29
LDHA-218ENST00000540430 GGT6Q6P531 493 aa13.2□□□□□ -0.3
LDHA-218ENST00000540430 NCOA1Q15788 1441 aa13.2□□□□□ -0.3
LDHA-218ENST00000540430 FKBP8Q14318 412 aa13.19□□□□□ -0.3
LDHA-218ENST00000540430 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
LDHA-218ENST00000540430 CCDC141Q6ZP82 1450 aa13.19□□□□□ -0.3
LDHA-218ENST00000540430 CAMSAP2Q08AD1 1489 aa13.18□□□□□ -0.3
LDHA-218ENST00000540430 DHX29Q7Z478 1369 aaKnown RBP13.18□□□□□ -0.3
LDHA-218ENST00000540430 PTPRKQ15262 1439 aa13.17□□□□□ -0.3
LDHA-218ENST00000540430 NEFLP07196 543 aa13.17□□□□□ -0.3
LDHA-218ENST00000540430 CAMSAP1Q5T5Y3 1602 aa13.17□□□□□ -0.3
LDHA-218ENST00000540430 FANCIQ9NVI1 1328 aa13.17□□□□□ -0.3
LDHA-218ENST00000540430 ZNF142P52746 1687 aaPredicted RBP13.16□□□□□ -0.3
LDHA-218ENST00000540430 MYO3AQ8NEV4 1616 aa13.16□□□□□ -0.3
LDHA-218ENST00000540430 LRRC9Q6ZRR7 1453 aa13.15□□□□□ -0.3
LDHA-218ENST00000540430 ARHGEF5Q12774 1597 aa13.15□□□□□ -0.3
LDHA-218ENST00000540430 CEP170BQ9Y4F5 1589 aaPredicted RBP13.14□□□□□ -0.31
LDHA-218ENST00000540430 FAM135AQ9P2D6 1515 aa13.14□□□□□ -0.31
LDHA-218ENST00000540430 BCANQ96GW7 911 aa13.14□□□□□ -0.31
LDHA-218ENST00000540430 PLA2R1Q13018 1463 aa13.14□□□□□ -0.31
LDHA-218ENST00000540430 MAP3K1Q13233 1512 aa13.13□□□□□ -0.31
LDHA-218ENST00000540430 KIF3BO15066 747 aa13.13□□□□□ -0.31
LDHA-218ENST00000540430 LTBP4Q8N2S1 1624 aa13.12□□□□□ -0.31
LDHA-218ENST00000540430 TSPY4P0CV99 314 aa13.12□□□□□ -0.31
LDHA-218ENST00000540430 TSPY10P0CW01 314 aa13.12□□□□□ -0.31
LDHA-218ENST00000540430 RRBP1Q9P2E9 1410 aaKnown RBP13.12□□□□□ -0.31
LDHA-218ENST00000540430 KDM5DQ9BY66 1539 aa13.11□□□□□ -0.31
LDHA-218ENST00000540430 PKD2Q13563 968 aa13.11□□□□□ -0.31
LDHA-218ENST00000540430 MSH5O43196 834 aa13.11□□□□□ -0.31
LDHA-218ENST00000540430 NCKAP5LQ9HCH0 1330 aa13.1□□□□□ -0.31
LDHA-218ENST00000540430 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
LDHA-218ENST00000540430 IQSEC2Q5JU85 1478 aa13.1□□□□□ -0.31
LDHA-218ENST00000540430 A2ML1A8K2U0 1454 aa13.1□□□□□ -0.31
LDHA-218ENST00000540430 PZPP20742 1482 aa13.09□□□□□ -0.31
LDHA-218ENST00000540430 WASHC2CQ9Y4E1 1318 aa13.09□□□□□ -0.31
LDHA-218ENST00000540430 MIA2Q96PC5 1412 aa13.09□□□□□ -0.31
LDHA-218ENST00000540430 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.31
LDHA-218ENST00000540430 MAST1Q9Y2H9 1570 aa13.08□□□□□ -0.32
LDHA-218ENST00000540430 MYOM3Q5VTT5 1437 aa13.08□□□□□ -0.32
LDHA-218ENST00000540430 DNMT1P26358 1616 aaKnown RBP13.08□□□□□ -0.32
LDHA-218ENST00000540430 TNRQ92752 1358 aa13.07□□□□□ -0.32
LDHA-218ENST00000540430 CCER2I3L3R5 266 aa13.07□□□□□ -0.32
LDHA-218ENST00000540430 FBXO31Q5XUX0 539 aaPredicted RBP13.06□□□□□ -0.32
LDHA-218ENST00000540430 RNF17Q9BXT8 1623 aaKnown RBP13.05□□□□□ -0.32
LDHA-218ENST00000540430 ZNF335Q9H4Z2 1342 aaPredicted RBP13.04□□□□□ -0.32
LDHA-218ENST00000540430 EIF2AK4Q9P2K8 1649 aaKnown RBP13.04□□□□□ -0.32
LDHA-218ENST00000540430 NLRP1Q9C000 1473 aa13.03□□□□□ -0.32
LDHA-218ENST00000540430 ZC3H13Q5T200 1668 aaKnown RBP13.03□□□□□ -0.32
LDHA-218ENST00000540430 ANO8Q9HCE9 1232 aaPredicted RBP13.02□□□□□ -0.32
LDHA-218ENST00000540430 POLR1AO95602 1720 aaPredicted RBP13.02□□□□□ -0.33
LDHA-218ENST00000540430 ABCC3O15438 1527 aa13.02□□□□□ -0.33
LDHA-218ENST00000540430 THEMISQ8N1K5 641 aaPredicted RBP13.01□□□□□ -0.33
LDHA-218ENST00000540430 DUOX2Q9NRD8 1548 aa13.01□□□□□ -0.33
LDHA-218ENST00000540430 NEURL4Q96JN8 1562 aa13□□□□□ -0.33
LDHA-218ENST00000540430 UGGT1Q9NYU2 1555 aa13□□□□□ -0.33
LDHA-218ENST00000540430 MROH1Q8NDA8 1641 aa12.99□□□□□ -0.33
LDHA-218ENST00000540430 SHANK2Q9UPX8 1470 aa12.99□□□□□ -0.33
LDHA-218ENST00000540430 PPP1R15AO75807 674 aaPredicted RBP12.99□□□□□ -0.33
LDHA-218ENST00000540430 ANKLE2Q86XL3 938 aa12.99□□□□□ -0.33
LDHA-218ENST00000540430 SPATA31D1Q6ZQQ2 1576 aa12.99□□□□□ -0.33
LDHA-218ENST00000540430 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.99□□□□□ -0.33
LDHA-218ENST00000540430 ERICH6BQ5W0A0 696 aa12.99□□□□□ -0.33
LDHA-218ENST00000540430 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
LDHA-218ENST00000540430 PTPN23Q9H3S7 1636 aa12.98□□□□□ -0.33
LDHA-218ENST00000540430 CROCC2H7BZ55 1655 aa12.98□□□□□ -0.33
LDHA-218ENST00000540430 ABCC5O15440 1437 aa12.97□□□□□ -0.33
LDHA-218ENST00000540430 KIF15Q9NS87 1388 aa12.97□□□□□ -0.33
LDHA-218ENST00000540430 ERVK-7P63135 1459 aa12.97□□□□□ -0.33
LDHA-218ENST00000540430 ITGAEP38570 1179 aa12.97□□□□□ -0.33
LDHA-218ENST00000540430 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
LDHA-218ENST00000540430 MED14O60244 1454 aa12.96□□□□□ -0.33
LDHA-218ENST00000540430 UBAP1LF5GYI3 381 aa12.96□□□□□ -0.33
LDHA-218ENST00000540430 ERBINQ96RT1 1412 aa12.96□□□□□ -0.33
LDHA-218ENST00000540430 CEP152O94986 1710 aa12.96□□□□□ -0.34
LDHA-218ENST00000540430 FGD6Q6ZV73 1430 aa12.96□□□□□ -0.34
LDHA-218ENST00000540430 CPS1P31327 1500 aa12.96□□□□□ -0.34
LDHA-218ENST00000540430 DDX10Q13206 875 aaKnown RBP12.95□□□□□ -0.34
LDHA-218ENST00000540430 PRDM15P57071 1507 aaPredicted RBP12.95□□□□□ -0.34
LDHA-218ENST00000540430 DISP3Q9P2K9 1392 aa12.95□□□□□ -0.34
LDHA-218ENST00000540430 DAPK1P53355 1430 aa12.95□□□□□ -0.34
LDHA-218ENST00000540430 NPHP4O75161 1426 aaPredicted RBP12.94□□□□□ -0.34
LDHA-218ENST00000540430 ARHGAP31Q2M1Z3 1444 aa12.94□□□□□ -0.34
LDHA-218ENST00000540430 ANP32CO43423 234 aa12.94□□□□□ -0.34
LDHA-218ENST00000540430 RRP7BPQ9NSQ0 103 aa12.94□□□□□ -0.34
LDHA-218ENST00000540430 UBE2Q2Q8WVN8 375 aa12.93□□□□□ -0.34
LDHA-218ENST00000540430 VWDEQ8N2E2 1590 aa12.93□□□□□ -0.34
LDHA-218ENST00000540430 CFAP65Q6ZU64 1925 aaKnown RBP12.93□□□□□ -0.34
LDHA-218ENST00000540430 DEKP35659 375 aaKnown RBP12.93□□□□□ -0.34
LDHA-218ENST00000540430 IQGAP1P46940 1657 aa12.92□□□□□ -0.34
LDHA-218ENST00000540430 RAB3GAP2Q9H2M9 1393 aa12.92□□□□□ -0.34
LDHA-218ENST00000540430 ANKRD30AQ9BXX3 1397 aa12.91□□□□□ -0.34
LDHA-218ENST00000540430 TRIM52Q96A61 297 aa12.91□□□□□ -0.34
LDHA-218ENST00000540430 UBR1Q8IWV7 1749 aa12.91□□□□□ -0.34
LDHA-218ENST00000540430 KANK1Q14678 1352 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms