RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 GZF1Q9H116 711 aaPredicted RBP16.52■□□□□ 0.24
DNMT1-203ENST00000540357 MSNP26038 577 aaKnown RBP16.51■□□□□ 0.23
DNMT1-203ENST00000540357 C11orf95C9JLR9 678 aaPredicted RBP16.51■□□□□ 0.23
DNMT1-203ENST00000540357 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
DNMT1-203ENST00000540357 ROCK1Q13464 1354 aa16.51■□□□□ 0.23
DNMT1-203ENST00000540357 KIAA1107Q9UPP5 1409 aa16.51■□□□□ 0.23
DNMT1-203ENST00000540357 HECW1Q76N89 1606 aa16.5■□□□□ 0.23
DNMT1-203ENST00000540357 CCDC146Q8IYE0 955 aa16.49■□□□□ 0.23
DNMT1-203ENST00000540357 DDX11L8A8MPP1 907 aa16.49■□□□□ 0.23
DNMT1-203ENST00000540357 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
DNMT1-203ENST00000540357 PTMAP06454 111 aaKnown RBP16.49■□□□□ 0.23
DNMT1-203ENST00000540357 KANK1Q14678 1352 aa16.48■□□□□ 0.23
DNMT1-203ENST00000540357 ANKRD30BQ9BXX2 1392 aa16.48■□□□□ 0.23
DNMT1-203ENST00000540357 ZNF644Q9H582 1327 aaPredicted RBP16.48■□□□□ 0.23
DNMT1-203ENST00000540357 ANKRD50Q9ULJ7 1429 aa16.48■□□□□ 0.23
DNMT1-203ENST00000540357 BRPF3Q9ULD4 1205 aa16.48■□□□□ 0.23
DNMT1-203ENST00000540357 UNC13AQ9UPW8 1703 aa16.47■□□□□ 0.23
DNMT1-203ENST00000540357 DAPK1P53355 1430 aa16.47■□□□□ 0.23
DNMT1-203ENST00000540357 HNRNPMP52272 730 aaKnown RBP eCLIP16.47■□□□□ 0.23
DNMT1-203ENST00000540357 IPO8O15397 1037 aaKnown RBP16.46■□□□□ 0.23
DNMT1-203ENST00000540357 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
DNMT1-203ENST00000540357 FAM43AQ8N2R8 423 aa16.46■□□□□ 0.23
DNMT1-203ENST00000540357 CUL7Q14999 1698 aa16.46■□□□□ 0.23
DNMT1-203ENST00000540357 MFAP1P55081 439 aaKnown RBP16.45■□□□□ 0.22
DNMT1-203ENST00000540357 CFAP43Q8NDM7 1665 aa16.45■□□□□ 0.22
DNMT1-203ENST00000540357 AAMPQ13685 434 aa16.45■□□□□ 0.22
DNMT1-203ENST00000540357 PRKCSHP14314 528 aaPredicted RBP16.44■□□□□ 0.22
DNMT1-203ENST00000540357 ABCA10Q8WWZ4 1543 aa16.44■□□□□ 0.22
DNMT1-203ENST00000540357 RPRD2Q5VT52 1461 aaKnown RBP16.44■□□□□ 0.22
DNMT1-203ENST00000540357 HSP90AA2PQ14568 343 aaPredicted RBP16.43■□□□□ 0.22
DNMT1-203ENST00000540357 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
DNMT1-203ENST00000540357 POLA1P09884 1462 aaPredicted RBP16.43■□□□□ 0.22
DNMT1-203ENST00000540357 U2SURPO15042 1029 aaKnown RBP16.42■□□□□ 0.22
DNMT1-203ENST00000540357 DNTTIP2Q5QJE6 756 aaKnown RBP16.42■□□□□ 0.22
DNMT1-203ENST00000540357 TOPBP1Q92547 1522 aa16.41■□□□□ 0.22
DNMT1-203ENST00000540357 ITPRIPQ8IWB1 547 aa16.41■□□□□ 0.22
DNMT1-203ENST00000540357 FRAT2O75474 233 aaPredicted RBP16.4■□□□□ 0.22
DNMT1-203ENST00000540357 STAG3Q9UJ98 1225 aa16.4■□□□□ 0.22
DNMT1-203ENST00000540357 CC2D2AQ9P2K1 1620 aa16.4■□□□□ 0.22
DNMT1-203ENST00000540357 SKOR2Q2VWA4 1001 aaPredicted RBP16.4■□□□□ 0.22
DNMT1-203ENST00000540357 COG6Q9Y2V7 657 aa16.39■□□□□ 0.21
DNMT1-203ENST00000540357 APAF1O14727 1248 aa16.39■□□□□ 0.21
DNMT1-203ENST00000540357 CHMP5Q9NZZ3 219 aa16.39■□□□□ 0.21
DNMT1-203ENST00000540357 ADAMTS8Q9UP79 889 aa16.39■□□□□ 0.21
DNMT1-203ENST00000540357 PTPRKQ15262 1439 aa16.39■□□□□ 0.21
DNMT1-203ENST00000540357 EPRSP07814 1512 aaKnown RBP16.38■□□□□ 0.21
DNMT1-203ENST00000540357 CLUAP1Q96AJ1 413 aa16.37■□□□□ 0.21
DNMT1-203ENST00000540357 PLEKHH2Q8IVE3 1493 aa16.37■□□□□ 0.21
DNMT1-203ENST00000540357 THOC2Q8NI27 1593 aaKnown RBP16.37■□□□□ 0.21
DNMT1-203ENST00000540357 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
DNMT1-203ENST00000540357 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.217e-7■□□□□ 10.4
DNMT1-203ENST00000540357 SMC4Q9NTJ3 1288 aa16.37■□□□□ 0.21
DNMT1-203ENST00000540357 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
DNMT1-203ENST00000540357 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
DNMT1-203ENST00000540357 ZKSCAN2Q63HK3 967 aa16.34■□□□□ 0.21
DNMT1-203ENST00000540357 NINLQ9Y2I6 1382 aa16.33■□□□□ 0.21
DNMT1-203ENST00000540357 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.2
DNMT1-203ENST00000540357 PDE3AQ14432 1141 aa16.33■□□□□ 0.2
DNMT1-203ENST00000540357 MRE11P49959 708 aa16.32■□□□□ 0.2
DNMT1-203ENST00000540357 PPP2R1AP30153 589 aa16.32■□□□□ 0.2
DNMT1-203ENST00000540357 EFCAB2Q5VUJ9 269 aa16.32■□□□□ 0.2
DNMT1-203ENST00000540357 JPH4Q96JJ6 628 aa16.31■□□□□ 0.2
DNMT1-203ENST00000540357 ABCC5O15440 1437 aa16.31■□□□□ 0.2
DNMT1-203ENST00000540357 CALD1Q05682 793 aaKnown RBP16.31■□□□□ 0.2
DNMT1-203ENST00000540357 UGGT2Q9NYU1 1516 aa16.3■□□□□ 0.2
DNMT1-203ENST00000540357 ERCC6Q03468 1493 aa16.3■□□□□ 0.2
DNMT1-203ENST00000540357 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
DNMT1-203ENST00000540357 TROQ12816 1431 aaPredicted RBP16.29■□□□□ 0.2
DNMT1-203ENST00000540357 CDK13Q14004 1512 aaKnown RBP16.29■□□□□ 0.2
DNMT1-203ENST00000540357 HAP1P54257 671 aaPredicted RBP16.28■□□□□ 0.2
DNMT1-203ENST00000540357 MCCP23508 829 aa16.28■□□□□ 0.2
DNMT1-203ENST00000540357 VSIG10Q8N0Z9 540 aa16.28■□□□□ 0.2
DNMT1-203ENST00000540357 C22orf23Q9BZE7 217 aa16.28■□□□□ 0.2
DNMT1-203ENST00000540357 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.2
DNMT1-203ENST00000540357 C9orf84Q5VXU9 1444 aa16.27■□□□□ 0.2
DNMT1-203ENST00000540357 DDX19BQ9UMR2 479 aa16.27■□□□□ 0.2
DNMT1-203ENST00000540357 TCOF1Q13428 1488 aaKnown RBP16.27■□□□□ 0.19
DNMT1-203ENST00000540357 RUNDC1Q96C34 613 aa16.27■□□□□ 0.19
DNMT1-203ENST00000540357 ERBINQ96RT1 1412 aa16.27■□□□□ 0.19
DNMT1-203ENST00000540357 POGKQ9P215 609 aa16.26■□□□□ 0.19
DNMT1-203ENST00000540357 RNF123Q5XPI4 1314 aa16.26■□□□□ 0.19
DNMT1-203ENST00000540357 PANK1Q8TE04 598 aa16.26■□□□□ 0.19
DNMT1-203ENST00000540357 CHAF1AQ13111 956 aaPredicted RBP16.26■□□□□ 0.19
DNMT1-203ENST00000540357 DZIP1LQ8IYY4 767 aaKnown RBP16.26■□□□□ 0.19
DNMT1-203ENST00000540357 SYAP1Q96A49 352 aaPredicted RBP16.26■□□□□ 0.19
DNMT1-203ENST00000540357 BCL2L13Q9BXK5 485 aa16.25■□□□□ 0.19
DNMT1-203ENST00000540357 ISY1Q9ULR0 285 aaKnown RBP16.25■□□□□ 0.19
DNMT1-203ENST00000540357 NBPF1Q3BBV0 1214 aa16.24■□□□□ 0.19
DNMT1-203ENST00000540357 TRAK2O60296 914 aa16.24■□□□□ 0.19
DNMT1-203ENST00000540357 SRPK2P78362 688 aaKnown RBP16.23■□□□□ 0.19
DNMT1-203ENST00000540357 DDX49Q9Y6V7 483 aaKnown RBP16.23■□□□□ 0.19
DNMT1-203ENST00000540357 KIAA2012Q0VF49 1180 aa16.23■□□□□ 0.19
DNMT1-203ENST00000540357 IQGAP2Q13576 1575 aa16.23■□□□□ 0.19
DNMT1-203ENST00000540357 SNAPC4Q5SXM2 1469 aa16.22■□□□□ 0.19
DNMT1-203ENST00000540357 SLFN5Q08AF3 891 aa16.22■□□□□ 0.19
DNMT1-203ENST00000540357 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
DNMT1-203ENST00000540357 NESP48681 1621 aa16.21■□□□□ 0.19
DNMT1-203ENST00000540357 CAMSAP2Q08AD1 1489 aa16.21■□□□□ 0.19
DNMT1-203ENST00000540357 SPAG9O60271 1321 aaKnown RBP16.21■□□□□ 0.19
DNMT1-203ENST00000540357 PRG4Q92954 1404 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms