RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 SYCP2Q9BX26 1530 aa13.68□□□□□ -0.22
KLHL42-203ENST00000540301 STRCP1A6NGW2 1772 aa13.68□□□□□ -0.22
KLHL42-203ENST00000540301 DEPDC5O75140 1603 aa13.67□□□□□ -0.22
KLHL42-203ENST00000540301 CDC42BPAQ5VT25 1732 aa13.67□□□□□ -0.22
KLHL42-203ENST00000540301 SYNMO15061 1565 aa13.66□□□□□ -0.22
KLHL42-203ENST00000540301 EEA1Q15075 1411 aa13.66□□□□□ -0.22
KLHL42-203ENST00000540301 LRRIQ1Q96JM4 1722 aa13.66□□□□□ -0.22
KLHL42-203ENST00000540301 IQGAP1P46940 1657 aa13.66□□□□□ -0.22
KLHL42-203ENST00000540301 UPF1Q92900 1129 aaKnown RBP eCLIP13.65□□□□□ -0.22
KLHL42-203ENST00000540301 FAM135AQ9P2D6 1515 aa13.64□□□□□ -0.23
KLHL42-203ENST00000540301 INO80Q9ULG1 1556 aaPredicted RBP13.64□□□□□ -0.23
KLHL42-203ENST00000540301 UGGT1Q9NYU2 1555 aa13.63□□□□□ -0.23
KLHL42-203ENST00000540301 ARHGAP35Q9NRY4 1499 aa13.63□□□□□ -0.23
KLHL42-203ENST00000540301 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
KLHL42-203ENST00000540301 PZPP20742 1482 aa13.62□□□□□ -0.23
KLHL42-203ENST00000540301 MIA2Q96PC5 1412 aa13.62□□□□□ -0.23
KLHL42-203ENST00000540301 KIAA1107Q9UPP5 1409 aa13.62□□□□□ -0.23
KLHL42-203ENST00000540301 NLRP1Q9C000 1473 aa13.61□□□□□ -0.23
KLHL42-203ENST00000540301 ADGBQ8N7X0 1667 aa13.61□□□□□ -0.23
KLHL42-203ENST00000540301 GPATCH8Q9UKJ3 1502 aaKnown RBP13.59□□□□□ -0.23
KLHL42-203ENST00000540301 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
KLHL42-203ENST00000540301 PLEKHH2Q8IVE3 1493 aa13.59□□□□□ -0.23
KLHL42-203ENST00000540301 CFDP1Q9UEE9 299 aaPredicted RBP13.58□□□□□ -0.24
KLHL42-203ENST00000540301 CCDC18Q5T9S5 1454 aa13.58□□□□□ -0.24
KLHL42-203ENST00000540301 WASHC2CQ9Y4E1 1318 aa13.58□□□□□ -0.24
KLHL42-203ENST00000540301 KIF3BO15066 747 aa13.57□□□□□ -0.24
KLHL42-203ENST00000540301 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
KLHL42-203ENST00000540301 DHX29Q7Z478 1369 aaKnown RBP13.57□□□□□ -0.24
KLHL42-203ENST00000540301 KDM5DQ9BY66 1539 aa13.56□□□□□ -0.24
KLHL42-203ENST00000540301 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
KLHL42-203ENST00000540301 TRIM52Q96A61 297 aa13.55□□□□□ -0.24
KLHL42-203ENST00000540301 ZC3H13Q5T200 1668 aaKnown RBP13.54□□□□□ -0.24
KLHL42-203ENST00000540301 CASKIN1Q8WXD9 1431 aa13.53□□□□□ -0.24
KLHL42-203ENST00000540301 ROBO1Q9Y6N7 1651 aa13.53□□□□□ -0.24
KLHL42-203ENST00000540301 RTEL1-TNFRSF6BF6WH68 1400 aa13.51□□□□□ -0.25
KLHL42-203ENST00000540301 JCADQ9P266 1359 aa13.51□□□□□ -0.25
KLHL42-203ENST00000540301 ZNF772Q68DY9 489 aaPredicted RBP13.51□□□□□ -0.25
KLHL42-203ENST00000540301 CCNB3Q8WWL7 1395 aa13.5□□□□□ -0.25
KLHL42-203ENST00000540301 SCAF11Q99590 1463 aaKnown RBP13.49□□□□□ -0.25
KLHL42-203ENST00000540301 TMEM94Q12767 1356 aa13.49□□□□□ -0.25
KLHL42-203ENST00000540301 TXNDC2Q86VQ3 553 aa13.49□□□□□ -0.25
KLHL42-203ENST00000540301 ZNF644Q9H582 1327 aaPredicted RBP13.48□□□□□ -0.25
KLHL42-203ENST00000540301 LTKP29376 864 aa13.48□□□□□ -0.25
KLHL42-203ENST00000540301 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
KLHL42-203ENST00000540301 RXRBP28702 533 aa13.47□□□□□ -0.25
KLHL42-203ENST00000540301 LRRC9Q6ZRR7 1453 aa13.47□□□□□ -0.25
KLHL42-203ENST00000540301 MBD5Q9P267 1494 aa13.47□□□□□ -0.25
KLHL42-203ENST00000540301 PHLPP1O60346 1717 aa13.46□□□□□ -0.25
KLHL42-203ENST00000540301 PROSER2Q86WR7 435 aaPredicted RBP13.45□□□□□ -0.26
KLHL42-203ENST00000540301 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
KLHL42-203ENST00000540301 UBR1Q8IWV7 1749 aa13.44□□□□□ -0.26
KLHL42-203ENST00000540301 EID1Q9Y6B2 187 aa13.44□□□□□ -0.26
KLHL42-203ENST00000540301 SPATA31A6Q5VVP1 1343 aa13.43□□□□□ -0.26
KLHL42-203ENST00000540301 ERVK-7P63135 1459 aa13.43□□□□□ -0.26
KLHL42-203ENST00000540301 ARHGAP23Q9P227 1491 aa13.43□□□□□ -0.26
KLHL42-203ENST00000540301 LRP6O75581 1613 aa13.43□□□□□ -0.26
KLHL42-203ENST00000540301 KCNA6P17658 529 aa13.43□□□□□ -0.26
KLHL42-203ENST00000540301 SLAIN2Q9P270 581 aa13.43□□□□□ -0.26
KLHL42-203ENST00000540301 MAP3K1Q13233 1512 aa13.43□□□□□ -0.26
KLHL42-203ENST00000540301 NCOA2Q15596 1464 aa13.42□□□□□ -0.26
KLHL42-203ENST00000540301 SLIT1O75093 1534 aa13.42□□□□□ -0.26
KLHL42-203ENST00000540301 FYCO1Q9BQS8 1478 aa13.42□□□□□ -0.26
KLHL42-203ENST00000540301 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
KLHL42-203ENST00000540301 SRCAPQ6ZRS2 3230 aa13.41□□□□□ -0.26
KLHL42-203ENST00000540301 MSH6P52701 1360 aa13.4□□□□□ -0.26
KLHL42-203ENST00000540301 ABCC3O15438 1527 aa13.39□□□□□ -0.27
KLHL42-203ENST00000540301 CFAP65Q6ZU64 1925 aaKnown RBP13.39□□□□□ -0.27
KLHL42-203ENST00000540301 COL16A1Q07092 1604 aaPredicted RBP13.39□□□□□ -0.27
KLHL42-203ENST00000540301 FGD6Q6ZV73 1430 aa13.39□□□□□ -0.27
KLHL42-203ENST00000540301 CCDC141Q6ZP82 1450 aa13.38□□□□□ -0.27
KLHL42-203ENST00000540301 PRDM15P57071 1507 aaPredicted RBP13.38□□□□□ -0.27
KLHL42-203ENST00000540301 MTUS2Q5JR59 1369 aa13.37□□□□□ -0.27
KLHL42-203ENST00000540301 RSPH4AQ5TD94 716 aa13.37□□□□□ -0.27
KLHL42-203ENST00000540301 SLC26A8Q96RN1 970 aa13.36□□□□□ -0.27
KLHL42-203ENST00000540301 TIAM1Q13009 1591 aa13.36□□□□□ -0.27
KLHL42-203ENST00000540301 TMEM2Q9UHN6 1383 aa13.35□□□□□ -0.27
KLHL42-203ENST00000540301 ZRANB1Q9UGI0 708 aa13.35□□□□□ -0.27
KLHL42-203ENST00000540301 NUTM2BA6NNL0 878 aaPredicted RBP13.34□□□□□ -0.27
KLHL42-203ENST00000540301 NUTM2EB1AL46 878 aaPredicted RBP13.34□□□□□ -0.27
KLHL42-203ENST00000540301 NUTM2DQ5VT03 806 aaPredicted RBP13.34□□□□□ -0.27
KLHL42-203ENST00000540301 NUTM2AQ8IVF1 878 aaPredicted RBP13.34□□□□□ -0.27
KLHL42-203ENST00000540301 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
KLHL42-203ENST00000540301 NKTRP30414 1462 aaKnown RBP13.34□□□□□ -0.27
KLHL42-203ENST00000540301 TSPY4P0CV99 314 aa13.33□□□□□ -0.28
KLHL42-203ENST00000540301 TSPY10P0CW01 314 aa13.33□□□□□ -0.28
KLHL42-203ENST00000540301 AFF2P51816 1311 aa13.33□□□□□ -0.28
KLHL42-203ENST00000540301 RGS12O14924 1447 aa13.32□□□□□ -0.28
KLHL42-203ENST00000540301 SHPRHQ149N8 1683 aa13.31□□□□□ -0.28
KLHL42-203ENST00000540301 RBM6P78332 1123 aaKnown RBP13.31□□□□□ -0.28
KLHL42-203ENST00000540301 TET3O43151 1660 aa13.31□□□□□ -0.28
KLHL42-203ENST00000540301 NWD1Q149M9 1564 aa13.3□□□□□ -0.28
KLHL42-203ENST00000540301 CEP152O94986 1710 aa13.3□□□□□ -0.28
KLHL42-203ENST00000540301 CAMSAP2Q08AD1 1489 aa13.29□□□□□ -0.28
KLHL42-203ENST00000540301 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
KLHL42-203ENST00000540301 PIK3C2BO00750 1634 aa13.29□□□□□ -0.28
KLHL42-203ENST00000540301 BCANQ96GW7 911 aa13.29□□□□□ -0.28
KLHL42-203ENST00000540301 QTRT2Q9H974 415 aaKnown RBP13.29□□□□□ -0.28
KLHL42-203ENST00000540301 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
KLHL42-203ENST00000540301 KDM5AP29375 1690 aaKnown RBP13.28□□□□□ -0.28
KLHL42-203ENST00000540301 ATAD2Q6PL18 1390 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms