RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 MRS2Q9HD23 443 aa17.12■□□□□ 0.33
USP10-202ENST00000540269 UNC13BO14795 1591 aa17.11■□□□□ 0.33
USP10-202ENST00000540269 PLCH2O75038 1416 aa17.1■□□□□ 0.33
USP10-202ENST00000540269 TRAPPC8Q9Y2L5 1435 aa17.09■□□□□ 0.33
USP10-202ENST00000540269 ST20-MTHFSA0A0A6YYL1 179 aa17.09■□□□□ 0.33
USP10-202ENST00000540269 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
USP10-202ENST00000540269 RGL3Q3MIN7 710 aa17.08■□□□□ 0.33
USP10-202ENST00000540269 PLXNC1O60486 1568 aa17.08■□□□□ 0.33
USP10-202ENST00000540269 UHRF1BP1LA0JNW5 1464 aa17.08■□□□□ 0.32
USP10-202ENST00000540269 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
USP10-202ENST00000540269 NEFLP07196 543 aa17.05■□□□□ 0.32
USP10-202ENST00000540269 NBPF1Q3BBV0 1214 aa17.05■□□□□ 0.32
USP10-202ENST00000540269 EFCAB2Q5VUJ9 269 aa17.05■□□□□ 0.32
USP10-202ENST00000540269 IRX6P78412 446 aaPredicted RBP17.05■□□□□ 0.32
USP10-202ENST00000540269 ABCC1P33527 1531 aa17.05■□□□□ 0.32
USP10-202ENST00000540269 IQGAP3Q86VI3 1631 aa17.04■□□□□ 0.32
USP10-202ENST00000540269 PRAG1Q86YV5 1406 aa17.04■□□□□ 0.32
USP10-202ENST00000540269 A2MP01023 1474 aa17.04■□□□□ 0.32
USP10-202ENST00000540269 DUOX2Q9NRD8 1548 aa17.03■□□□□ 0.32
USP10-202ENST00000540269 AFAP1Q8N556 730 aa17.03■□□□□ 0.32
USP10-202ENST00000540269 ROCK2O75116 1388 aaKnown RBP17.03■□□□□ 0.32
USP10-202ENST00000540269 MAGI2Q86UL8 1455 aa17.01■□□□□ 0.31
USP10-202ENST00000540269 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
USP10-202ENST00000540269 ARID4BQ4LE39 1312 aaPredicted RBP17■□□□□ 0.31
USP10-202ENST00000540269 SENP3-EIF4A1A0A087X0R7 540 aa16.99■□□□□ 0.31
USP10-202ENST00000540269 ERBINQ96RT1 1412 aa16.99■□□□□ 0.31
USP10-202ENST00000540269 ZBED9Q6R2W3 1325 aa16.97■□□□□ 0.31
USP10-202ENST00000540269 SPAG9O60271 1321 aaKnown RBP16.96■□□□□ 0.31
USP10-202ENST00000540269 ATP10AO60312 1499 aa16.95■□□□□ 0.3
USP10-202ENST00000540269 ZFYVE16Q7Z3T8 1539 aa16.94■□□□□ 0.3
USP10-202ENST00000540269 WDR7Q9Y4E6 1490 aa16.94■□□□□ 0.3
USP10-202ENST00000540269 BCL11AQ9H165 835 aa16.94■□□□□ 0.3
USP10-202ENST00000540269 GPRASP1Q5JY77 1395 aa16.94■□□□□ 0.3
USP10-202ENST00000540269 E9PCH4 1651 aa16.93■□□□□ 0.3
USP10-202ENST00000540269 TESK2Q96S53 571 aa16.91■□□□□ 0.3
USP10-202ENST00000540269 PNISRQ8TF01 805 aaKnown RBP16.9■□□□□ 0.3
USP10-202ENST00000540269 DISP3Q9P2K9 1392 aa16.9■□□□□ 0.3
USP10-202ENST00000540269 ARAP3Q8WWN8 1544 aa16.9■□□□□ 0.3
USP10-202ENST00000540269 FANCAO15360 1455 aa16.9■□□□□ 0.3
USP10-202ENST00000540269 PRDM15P57071 1507 aaPredicted RBP16.89■□□□□ 0.29
USP10-202ENST00000540269 RTEL1-TNFRSF6BF6WH68 1400 aa16.89■□□□□ 0.29
USP10-202ENST00000540269 ABCA9Q8IUA7 1624 aa16.88■□□□□ 0.29
USP10-202ENST00000540269 ASXL2Q76L83 1435 aa16.86■□□□□ 0.29
USP10-202ENST00000540269 SCAPERQ9BY12 1400 aa16.86■□□□□ 0.29
USP10-202ENST00000540269 COL17A1Q9UMD9 1497 aaPredicted RBP16.86■□□□□ 0.29
USP10-202ENST00000540269 PER1O15534 1290 aaPredicted RBP16.86■□□□□ 0.29
USP10-202ENST00000540269 ATP7AQ04656 1500 aa16.86■□□□□ 0.29
USP10-202ENST00000540269 TMC1Q8TDI8 760 aa16.85■□□□□ 0.29
USP10-202ENST00000540269 INO80Q9ULG1 1556 aaPredicted RBP16.85■□□□□ 0.29
USP10-202ENST00000540269 LAMC1P11047 1609 aa16.85■□□□□ 0.29
USP10-202ENST00000540269 DEPDC5O75140 1603 aa16.84■□□□□ 0.29
USP10-202ENST00000540269 ADGRL1O94910 1474 aa16.84■□□□□ 0.29
USP10-202ENST00000540269 CLTCL1P53675 1640 aa16.83■□□□□ 0.29
USP10-202ENST00000540269 KIF3BO15066 747 aa16.83■□□□□ 0.28
USP10-202ENST00000540269 MYBBP1AQ9BQG0 1328 aaKnown RBP16.83■□□□□ 0.28
USP10-202ENST00000540269 TRPM2O94759 1503 aa16.83■□□□□ 0.28
USP10-202ENST00000540269 PTPRTO14522 1441 aa16.82■□□□□ 0.28
USP10-202ENST00000540269 RNF17Q9BXT8 1623 aaKnown RBP16.82■□□□□ 0.28
USP10-202ENST00000540269 EIF2AK4Q9P2K8 1649 aaKnown RBP16.82■□□□□ 0.28
USP10-202ENST00000540269 LRPPRCP42704 1394 aaKnown RBP16.82■□□□□ 0.28
USP10-202ENST00000540269 MYT1LQ9UL68 1186 aa16.81■□□□□ 0.28
USP10-202ENST00000540269 MADDQ8WXG6 1647 aa16.81■□□□□ 0.28
USP10-202ENST00000540269 SPHKAPQ2M3C7 1700 aa16.81■□□□□ 0.28
USP10-202ENST00000540269 PARD3Q8TEW0 1356 aa16.81■□□□□ 0.28
USP10-202ENST00000540269 RALBP1Q15311 655 aa16.81■□□□□ 0.28
USP10-202ENST00000540269 MROH1Q8NDA8 1641 aa16.8■□□□□ 0.28
USP10-202ENST00000540269 VWDEQ8N2E2 1590 aa16.8■□□□□ 0.28
USP10-202ENST00000540269 SMG6Q86US8 1419 aaKnown RBP16.8■□□□□ 0.28
USP10-202ENST00000540269 BRD4O60885 1362 aaPredicted RBP16.8■□□□□ 0.28
USP10-202ENST00000540269 UGGT1Q9NYU2 1555 aa16.79■□□□□ 0.28
USP10-202ENST00000540269 PANK3Q9H999 370 aa16.79■□□□□ 0.28
USP10-202ENST00000540269 TET3O43151 1660 aa16.78■□□□□ 0.28
USP10-202ENST00000540269 CC2D1BQ5T0F9 858 aaKnown RBP16.78■□□□□ 0.28
USP10-202ENST00000540269 CEP152O94986 1710 aa16.78■□□□□ 0.28
USP10-202ENST00000540269 NUDCQ9Y266 331 aa16.77■□□□□ 0.28
USP10-202ENST00000540269 RBM19Q9Y4C8 960 aaKnown RBP16.77■□□□□ 0.28
USP10-202ENST00000540269 KTN1Q86UP2 1357 aaKnown RBP16.77■□□□□ 0.27
USP10-202ENST00000540269 KIDINS220Q9ULH0 1771 aa16.76■□□□□ 0.27
USP10-202ENST00000540269 B4GALNT3Q6L9W6 998 aa16.76■□□□□ 0.27
USP10-202ENST00000540269 ERICH6Q7L0X2 663 aa16.76■□□□□ 0.27
USP10-202ENST00000540269 PPP4R2Q9NY27 417 aa16.76■□□□□ 0.27
USP10-202ENST00000540269 TMF1P82094 1093 aa16.75■□□□□ 0.27
USP10-202ENST00000540269 IQGAP1P46940 1657 aa16.74■□□□□ 0.27
USP10-202ENST00000540269 NLRP13Q86W25 1043 aa16.74■□□□□ 0.27
USP10-202ENST00000540269 KANK1Q14678 1352 aa16.73■□□□□ 0.27
USP10-202ENST00000540269 OSCARQ8IYS5 282 aa16.73■□□□□ 0.27
USP10-202ENST00000540269 ERICH6BQ5W0A0 696 aa16.73■□□□□ 0.27
USP10-202ENST00000540269 SALL2Q9Y467 1007 aaPredicted RBP16.73■□□□□ 0.27
USP10-202ENST00000540269 RNF123Q5XPI4 1314 aa16.71■□□□□ 0.27
USP10-202ENST00000540269 ADGRF5Q8IZF2 1346 aa16.7■□□□□ 0.26
USP10-202ENST00000540269 CFAP70Q5T0N1 1121 aa16.69■□□□□ 0.26
USP10-202ENST00000540269 PPRC1Q5VV67 1664 aaKnown RBP16.69■□□□□ 0.26
USP10-202ENST00000540269 SCAF11Q99590 1463 aaKnown RBP16.69■□□□□ 0.26
USP10-202ENST00000540269 EFCAB6Q5THR3 1501 aa16.68■□□□□ 0.26
USP10-202ENST00000540269 CD109Q6YHK3 1445 aa16.68■□□□□ 0.26
USP10-202ENST00000540269 ZNF518AQ6AHZ1 1483 aa16.67■□□□□ 0.26
USP10-202ENST00000540269 FRMPD1Q5SYB0 1578 aa16.67■□□□□ 0.26
USP10-202ENST00000540269 NPM1P06748 294 aaKnown RBP eCLIP16.67■□□□□ 0.26
USP10-202ENST00000540269 MROH2AA6NES4 1674 aa16.67■□□□□ 0.26
USP10-202ENST00000540269 WASHC2CQ9Y4E1 1318 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms