RNA–Protein interactions for RNA: ENST00000540115.1

ACSL3-210, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 3

Gene ACSL3, Length 624 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-210ENST00000540115 FAM135AQ9P2D6 1515 aa15.4■□□□□ 0.06
ACSL3-210ENST00000540115 C3P01024 1663 aa15.4■□□□□ 0.06
ACSL3-210ENST00000540115 PTPN23Q9H3S7 1636 aa15.39■□□□□ 0.05
ACSL3-210ENST00000540115 FAM50AQ14320 339 aaKnown RBP15.38■□□□□ 0.05
ACSL3-210ENST00000540115 SHANK2Q9UPX8 1470 aa15.38■□□□□ 0.05
ACSL3-210ENST00000540115 TCOF1Q13428 1488 aaKnown RBP15.37■□□□□ 0.05
ACSL3-210ENST00000540115 ANKRD30AQ9BXX3 1397 aa15.36■□□□□ 0.05
ACSL3-210ENST00000540115 KIF15Q9NS87 1388 aa15.36■□□□□ 0.05
ACSL3-210ENST00000540115 ABCC5O15440 1437 aa15.36■□□□□ 0.05
ACSL3-210ENST00000540115 RRP7BPQ9NSQ0 103 aa15.36■□□□□ 0.05
ACSL3-210ENST00000540115 KDM5DQ9BY66 1539 aa15.36■□□□□ 0.05
ACSL3-210ENST00000540115 DAPK1P53355 1430 aa15.35■□□□□ 0.05
ACSL3-210ENST00000540115 PTPRKQ15262 1439 aa15.35■□□□□ 0.05
ACSL3-210ENST00000540115 CLTCQ00610 1675 aaKnown RBP15.35■□□□□ 0.05
ACSL3-210ENST00000540115 DUOX2Q9NRD8 1548 aa15.35■□□□□ 0.05
ACSL3-210ENST00000540115 CHIC2Q9UKJ5 165 aa15.33■□□□□ 0.04
ACSL3-210ENST00000540115 KANK1Q14678 1352 aa15.32■□□□□ 0.04
ACSL3-210ENST00000540115 TNRQ92752 1358 aa15.32■□□□□ 0.04
ACSL3-210ENST00000540115 ERBINQ96RT1 1412 aa15.32■□□□□ 0.04
ACSL3-210ENST00000540115 ILDR1Q86SU0 546 aaPredicted RBP15.31■□□□□ 0.04
ACSL3-210ENST00000540115 PZPP20742 1482 aa15.31■□□□□ 0.04
ACSL3-210ENST00000540115 EIF2AK4Q9P2K8 1649 aaKnown RBP15.31■□□□□ 0.04
ACSL3-210ENST00000540115 DNMT1P26358 1616 aaKnown RBP15.3■□□□□ 0.04
ACSL3-210ENST00000540115 PKD2Q13563 968 aa15.3■□□□□ 0.04
ACSL3-210ENST00000540115 PTPRTO14522 1441 aa15.29■□□□□ 0.04
ACSL3-210ENST00000540115 FBXO41Q8TF61 875 aa15.29■□□□□ 0.04
ACSL3-210ENST00000540115 NCOA1Q15788 1441 aa15.28■□□□□ 0.04
ACSL3-210ENST00000540115 FBXO31Q5XUX0 539 aaPredicted RBP15.28■□□□□ 0.04
ACSL3-210ENST00000540115 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.28■□□□□ 0.04
ACSL3-210ENST00000540115 THEMISQ8N1K5 641 aaPredicted RBP15.27■□□□□ 0.04
ACSL3-210ENST00000540115 RNF17Q9BXT8 1623 aaKnown RBP15.27■□□□□ 0.03
ACSL3-210ENST00000540115 A2ML1A8K2U0 1454 aa15.27■□□□□ 0.03
ACSL3-210ENST00000540115 CROCC2H7BZ55 1655 aa15.26■□□□□ 0.03
ACSL3-210ENST00000540115 CAMSAP1Q5T5Y3 1602 aa15.25■□□□□ 0.03
ACSL3-210ENST00000540115 CEP170BQ9Y4F5 1589 aaPredicted RBP15.25■□□□□ 0.03
ACSL3-210ENST00000540115 CERKQ8TCT0 537 aa15.25■□□□□ 0.03
ACSL3-210ENST00000540115 ABCC3O15438 1527 aa15.25■□□□□ 0.03
ACSL3-210ENST00000540115 PLA2R1Q13018 1463 aa15.25■□□□□ 0.03
ACSL3-210ENST00000540115 NLRP1Q9C000 1473 aa15.25■□□□□ 0.03
ACSL3-210ENST00000540115 ZC3H13Q5T200 1668 aaKnown RBP15.25■□□□□ 0.03
ACSL3-210ENST00000540115 MYO3AQ8NEV4 1616 aa15.25■□□□□ 0.03
ACSL3-210ENST00000540115 NCKAP5LQ9HCH0 1330 aa15.23■□□□□ 0.03
ACSL3-210ENST00000540115 ADGRL2O95490 1459 aa15.23■□□□□ 0.03
ACSL3-210ENST00000540115 SCAF1Q9H7N4 1312 aaKnown RBP15.22■□□□□ 0.03
ACSL3-210ENST00000540115 ANKLE2Q86XL3 938 aa15.22■□□□□ 0.03
ACSL3-210ENST00000540115 PPARGC1BQ86YN6 1023 aaKnown RBP15.22■□□□□ 0.03
ACSL3-210ENST00000540115 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.22■□□□□ 0.03
ACSL3-210ENST00000540115 ZNF142P52746 1687 aaPredicted RBP15.22■□□□□ 0.03
ACSL3-210ENST00000540115 ARHGAP31Q2M1Z3 1444 aa15.21■□□□□ 0.03
ACSL3-210ENST00000540115 ANKRD50Q9ULJ7 1429 aa15.21■□□□□ 0.03
ACSL3-210ENST00000540115 STRCQ7RTU9 1775 aa15.21■□□□□ 0.02
ACSL3-210ENST00000540115 PRDM15P57071 1507 aaPredicted RBP15.2■□□□□ 0.02
ACSL3-210ENST00000540115 ITGAEP38570 1179 aa15.19■□□□□ 0.02
ACSL3-210ENST00000540115 ROCK1Q13464 1354 aa15.19■□□□□ 0.02
ACSL3-210ENST00000540115 ERVK-7P63135 1459 aa15.19■□□□□ 0.02
ACSL3-210ENST00000540115 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
ACSL3-210ENST00000540115 MROH1Q8NDA8 1641 aa15.17■□□□□ 0.02
ACSL3-210ENST00000540115 SPATA31D1Q6ZQQ2 1576 aa15.17■□□□□ 0.02
ACSL3-210ENST00000540115 UGGT1Q9NYU2 1555 aa15.17■□□□□ 0.02
ACSL3-210ENST00000540115 LMTK2Q8IWU2 1503 aa15.15■□□□□ 0.02
ACSL3-210ENST00000540115 DEPDC5O75140 1603 aa15.14■□□□□ 0.01
ACSL3-210ENST00000540115 CEP152O94986 1710 aa15.13■□□□□ 0.01
ACSL3-210ENST00000540115 EID1Q9Y6B2 187 aa15.13■□□□□ 0.01
ACSL3-210ENST00000540115 SLC52A1Q9NWF4 448 aa15.12■□□□□ 0.01
ACSL3-210ENST00000540115 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
ACSL3-210ENST00000540115 ZNF335Q9H4Z2 1342 aaPredicted RBP15.1■□□□□ 0.01
ACSL3-210ENST00000540115 VWDEQ8N2E2 1590 aa15.1■□□□□ 0.01
ACSL3-210ENST00000540115 NPHP4O75161 1426 aaPredicted RBP15.09■□□□□ 0.01
ACSL3-210ENST00000540115 RRBP1Q9P2E9 1410 aaKnown RBP15.09■□□□□ 0.01
ACSL3-210ENST00000540115 IQSEC2Q5JU85 1478 aa15.09■□□□□ 0.01
ACSL3-210ENST00000540115 RPRD2Q5VT52 1461 aaKnown RBP15.09■□□□□ 0.01
ACSL3-210ENST00000540115 HDGFP51858 240 aaKnown RBP15.08■□□□□ 0
ACSL3-210ENST00000540115 TXNDC2Q86VQ3 553 aa15.08■□□□□ 0
ACSL3-210ENST00000540115 IDI1Q13907 227 aa15.07■□□□□ 0
ACSL3-210ENST00000540115 NUP155O75694 1391 aa15.07■□□□□ 0
ACSL3-210ENST00000540115 MED14O60244 1454 aa15.07■□□□□ 0
ACSL3-210ENST00000540115 EFCAB6Q5THR3 1501 aa15.07■□□□□ 0
ACSL3-210ENST00000540115 CFAP65Q6ZU64 1925 aaKnown RBP15.06■□□□□ 0
ACSL3-210ENST00000540115 NOS1P29475 1434 aa15.06■□□□□ 0
ACSL3-210ENST00000540115 LTBP4Q8N2S1 1624 aa15.06■□□□□ 0
ACSL3-210ENST00000540115 POLR1AO95602 1720 aaPredicted RBP15.05■□□□□ -0
ACSL3-210ENST00000540115 SCAF11Q99590 1463 aaKnown RBP15.04■□□□□ -0
ACSL3-210ENST00000540115 TMEM2Q9UHN6 1383 aa15.04■□□□□ -0
ACSL3-210ENST00000540115 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
ACSL3-210ENST00000540115 UNC13BO14795 1591 aa15.02■□□□□ -0
ACSL3-210ENST00000540115 SLIT1O75093 1534 aa15.02■□□□□ -0
ACSL3-210ENST00000540115 CPS1P31327 1500 aa15.02■□□□□ -0
ACSL3-210ENST00000540115 UBAP1LF5GYI3 381 aa15.02■□□□□ -0
ACSL3-210ENST00000540115 NEURL4Q96JN8 1562 aa15.02□□□□□ -0.01
ACSL3-210ENST00000540115 ARHGAP23Q9P227 1491 aa15.01□□□□□ -0.01
ACSL3-210ENST00000540115 TET3O43151 1660 aa15.01□□□□□ -0.01
ACSL3-210ENST00000540115 CHGAP10645 457 aaKnown RBP15.01□□□□□ -0.01
ACSL3-210ENST00000540115 LTKP29376 864 aa15.01□□□□□ -0.01
ACSL3-210ENST00000540115 BCANQ96GW7 911 aa15.01□□□□□ -0.01
ACSL3-210ENST00000540115 UBR1Q8IWV7 1749 aa15□□□□□ -0.01
ACSL3-210ENST00000540115 ABCF1Q8NE71 845 aaKnown RBP eCLIP15□□□□□ -0.01
ACSL3-210ENST00000540115 TOM1O60784 492 aa14.99□□□□□ -0.01
ACSL3-210ENST00000540115 PPP1R15AO75807 674 aaPredicted RBP14.99□□□□□ -0.01
ACSL3-210ENST00000540115 PIK3C2BO00750 1634 aa14.99□□□□□ -0.01
ACSL3-210ENST00000540115 KDM5AP29375 1690 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms