RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 DEPDC5O75140 1603 aa24.29■■□□□ 1.48
LTBR-207ENST00000539925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.29■■□□□ 1.485e-8■□□□□ 11.3
LTBR-207ENST00000539925 MYT1LQ9UL68 1186 aa24.29■■□□□ 1.48
LTBR-207ENST00000539925 CCDC144AA2RUR9 1427 aa24.28■■□□□ 1.48
LTBR-207ENST00000539925 EIF4G2P78344 907 aaKnown RBP eCLIP24.25■■□□□ 1.47
LTBR-207ENST00000539925 KIDINS220Q9ULH0 1771 aa24.24■■□□□ 1.47
LTBR-207ENST00000539925 UHRF1BP1Q6BDS2 1440 aa24.24■■□□□ 1.47
LTBR-207ENST00000539925 HECW2Q9P2P5 1572 aa24.24■■□□□ 1.47
LTBR-207ENST00000539925 A2MP01023 1474 aa24.22■■□□□ 1.47
LTBR-207ENST00000539925 VWDEQ8N2E2 1590 aa24.22■■□□□ 1.47
LTBR-207ENST00000539925 PRDM15P57071 1507 aaPredicted RBP24.21■■□□□ 1.47
LTBR-207ENST00000539925 KIF3BO15066 747 aa24.19■■□□□ 1.46
LTBR-207ENST00000539925 DIP2BQ9P265 1576 aa24.19■■□□□ 1.46
LTBR-207ENST00000539925 TET3O43151 1660 aa24.18■■□□□ 1.46
LTBR-207ENST00000539925 MIER1Q8N108 512 aa24.18■■□□□ 1.46
LTBR-207ENST00000539925 PLA2R1Q13018 1463 aa24.18■■□□□ 1.46
LTBR-207ENST00000539925 NBPF8Q3BBV2 869 aa24.17■■□□□ 1.46
LTBR-207ENST00000539925 FAM69CQ0P6D2 419 aa24.15■■□□□ 1.46
LTBR-207ENST00000539925 BCORL1Q5H9F3 1711 aa24.15■■□□□ 1.46
LTBR-207ENST00000539925 RNF17Q9BXT8 1623 aaKnown RBP24.14■■□□□ 1.46
LTBR-207ENST00000539925 LMTK2Q8IWU2 1503 aa24.14■■□□□ 1.45
LTBR-207ENST00000539925 HSPA5P11021 654 aaKnown RBP24.14■■□□□ 1.45
LTBR-207ENST00000539925 STAC3Q96MF2 364 aa24.14■■□□□ 1.45
LTBR-207ENST00000539925 PTPRTO14522 1441 aa24.14■■□□□ 1.45
LTBR-207ENST00000539925 RALGAPBQ86X10 1494 aa24.12■■□□□ 1.45
LTBR-207ENST00000539925 TRPM2O94759 1503 aa24.12■■□□□ 1.45
LTBR-207ENST00000539925 MROH1Q8NDA8 1641 aa24.1■■□□□ 1.45
LTBR-207ENST00000539925 E9PCH4 1651 aa24.09■■□□□ 1.45
LTBR-207ENST00000539925 RICTORQ6R327 1708 aa24.09■■□□□ 1.45
LTBR-207ENST00000539925 DDX10Q13206 875 aaKnown RBP24.07■■□□□ 1.44
LTBR-207ENST00000539925 ZMYM4Q5VZL5 1548 aa24.07■■□□□ 1.44
LTBR-207ENST00000539925 SPATA31E1Q6ZUB1 1445 aa24.07■■□□□ 1.44
LTBR-207ENST00000539925 DCAF11Q8TEB1 546 aa24.07■■□□□ 1.44
LTBR-207ENST00000539925 ABCA6Q8N139 1617 aa24.06■■□□□ 1.44
LTBR-207ENST00000539925 NEURL4Q96JN8 1562 aa24.06■■□□□ 1.44
LTBR-207ENST00000539925 FRMPD1Q5SYB0 1578 aa24.06■■□□□ 1.44
LTBR-207ENST00000539925 SPHKAPQ2M3C7 1700 aa24.05■■□□□ 1.44
LTBR-207ENST00000539925 RAPGEF3O95398 923 aa24.05■■□□□ 1.44
LTBR-207ENST00000539925 EFCAB6Q5THR3 1501 aa24.04■■□□□ 1.44
LTBR-207ENST00000539925 DIP2CQ9Y2E4 1556 aa24.03■■□□□ 1.44
LTBR-207ENST00000539925 CENPBP07199 599 aaPredicted RBP24.03■■□□□ 1.44
LTBR-207ENST00000539925 HIRIP3Q9BW71 556 aaPredicted RBP24.03■■□□□ 1.44
LTBR-207ENST00000539925 PRAG1Q86YV5 1406 aa24.01■■□□□ 1.43
LTBR-207ENST00000539925 ZNF326Q5BKZ1 582 aaKnown RBP24.01■■□□□ 1.43
LTBR-207ENST00000539925 ARID4BQ4LE39 1312 aaPredicted RBP24■■□□□ 1.43
LTBR-207ENST00000539925 USP47Q96K76 1375 aa23.99■■□□□ 1.43
LTBR-207ENST00000539925 KDM2AQ9Y2K7 1162 aa23.98■■□□□ 1.43
LTBR-207ENST00000539925 CARD11Q9BXL7 1154 aa23.97■■□□□ 1.43
LTBR-207ENST00000539925 PPRC1Q5VV67 1664 aaKnown RBP23.96■■□□□ 1.43
LTBR-207ENST00000539925 CEP152O94986 1710 aa23.96■■□□□ 1.43
LTBR-207ENST00000539925 RGL3Q3MIN7 710 aa23.95■■□□□ 1.43
LTBR-207ENST00000539925 WASHC2AQ641Q2 1341 aa23.95■■□□□ 1.42
LTBR-207ENST00000539925 GPRASP1Q5JY77 1395 aa23.95■■□□□ 1.42
LTBR-207ENST00000539925 CCDC7Q96M83 1385 aa23.95■■□□□ 1.42
LTBR-207ENST00000539925 ANP32CO43423 234 aa23.95■■□□□ 1.42
LTBR-207ENST00000539925 ROCK2O75116 1388 aaKnown RBP23.94■■□□□ 1.42
LTBR-207ENST00000539925 REREQ9P2R6 1566 aa23.94■■□□□ 1.42
LTBR-207ENST00000539925 LAMC1P11047 1609 aa23.93■■□□□ 1.42
LTBR-207ENST00000539925 CLTCL1P53675 1640 aa23.93■■□□□ 1.42
LTBR-207ENST00000539925 GGT6Q6P531 493 aa23.92■■□□□ 1.42
LTBR-207ENST00000539925 ZC3H13Q5T200 1668 aaKnown RBP23.92■■□□□ 1.42
LTBR-207ENST00000539925 ABCC3O15438 1527 aa23.92■■□□□ 1.42
LTBR-207ENST00000539925 WASHC2CQ9Y4E1 1318 aa23.92■■□□□ 1.42
LTBR-207ENST00000539925 CNTLNQ9NXG0 1405 aa23.92■■□□□ 1.42
LTBR-207ENST00000539925 POLR1AO95602 1720 aaPredicted RBP23.92■■□□□ 1.42
LTBR-207ENST00000539925 PPP6R1Q9UPN7 881 aa23.92■■□□□ 1.42
LTBR-207ENST00000539925 TRPM1Q7Z4N2 1603 aa23.91■■□□□ 1.42
LTBR-207ENST00000539925 ARHGAP31Q2M1Z3 1444 aa23.91■■□□□ 1.42
LTBR-207ENST00000539925 YEATS2Q9ULM3 1422 aa23.91■■□□□ 1.42
LTBR-207ENST00000539925 CCER2I3L3R5 266 aa23.89■■□□□ 1.42
LTBR-207ENST00000539925 NPATQ14207 1427 aa23.88■■□□□ 1.41
LTBR-207ENST00000539925 AGLP35573 1532 aa23.88■■□□□ 1.41
LTBR-207ENST00000539925 TSPOAP1O95153 1857 aa23.88■■□□□ 1.41
LTBR-207ENST00000539925 KIF13AQ9H1H9 1805 aa23.87■■□□□ 1.41
LTBR-207ENST00000539925 KIF7Q2M1P5 1343 aa23.84■■□□□ 1.41
LTBR-207ENST00000539925 CAMSAP1Q5T5Y3 1602 aa23.84■■□□□ 1.41
LTBR-207ENST00000539925 DNAJC5Q9H3Z4 198 aa23.83■■□□□ 1.41
LTBR-207ENST00000539925 MYOM2P54296 1465 aa23.83■■□□□ 1.41
LTBR-207ENST00000539925 KIF1BO60333 1816 aa23.83■■□□□ 1.41
LTBR-207ENST00000539925 NOS1P29475 1434 aa23.82■■□□□ 1.4
LTBR-207ENST00000539925 MADDQ8WXG6 1647 aa23.8■■□□□ 1.4
LTBR-207ENST00000539925 C11orf95C9JLR9 678 aaPredicted RBP23.79■■□□□ 1.4
LTBR-207ENST00000539925 RPGRIP1LQ68CZ1 1315 aa23.79■■□□□ 1.4
LTBR-207ENST00000539925 ADGRB3O60242 1522 aa23.78■■□□□ 1.4
LTBR-207ENST00000539925 KIAA1210Q9ULL0 1709 aa23.77■■□□□ 1.4
LTBR-207ENST00000539925 ST20-MTHFSA0A0A6YYL1 179 aa23.76■■□□□ 1.39
LTBR-207ENST00000539925 ARHGEF40Q8TER5 1519 aa23.76■■□□□ 1.39
LTBR-207ENST00000539925 SLC24A1O60721 1099 aa23.74■■□□□ 1.39
LTBR-207ENST00000539925 SLC52A1Q9NWF4 448 aa23.74■■□□□ 1.39
LTBR-207ENST00000539925 NBPF1Q3BBV0 1214 aa23.73■■□□□ 1.39
LTBR-207ENST00000539925 YTHDC1Q96MU7 727 aaKnown RBP23.73■■□□□ 1.39
LTBR-207ENST00000539925 UGGT1Q9NYU2 1555 aa23.72■■□□□ 1.39
LTBR-207ENST00000539925 NRXN1Q9ULB1 1477 aa23.71■■□□□ 1.39
LTBR-207ENST00000539925 PIK3C2BO00750 1634 aa23.7■■□□□ 1.39
LTBR-207ENST00000539925 EIF3AQ14152 1382 aaKnown RBP23.69■■□□□ 1.38
LTBR-207ENST00000539925 SCAF11Q99590 1463 aaKnown RBP23.69■■□□□ 1.38
LTBR-207ENST00000539925 IFT172Q9UG01 1749 aa23.69■■□□□ 1.38
LTBR-207ENST00000539925 COL17A1Q9UMD9 1497 aaPredicted RBP23.68■■□□□ 1.38
LTBR-207ENST00000539925 SYNMO15061 1565 aa23.66■■□□□ 1.38
LTBR-207ENST00000539925 TMF1P82094 1093 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms