RNA–Protein interactions for RNA: ENST00000538145.5

RHBDL3-204, Transcript of rhomboid like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHBDL3, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-204ENST00000538145 ITGAEP38570 1179 aa33.37■■■□□ 2.93
RHBDL3-204ENST00000538145 CNTLNQ9NXG0 1405 aa33.37■■■□□ 2.93
RHBDL3-204ENST00000538145 GGT6Q6P531 493 aa33.36■■■□□ 2.93
RHBDL3-204ENST00000538145 MROH2AA6NES4 1674 aa33.34■■■□□ 2.93
RHBDL3-204ENST00000538145 MROH1Q8NDA8 1641 aa33.33■■■□□ 2.93
RHBDL3-204ENST00000538145 LMTK3Q96Q04 1460 aa33.33■■■□□ 2.93
RHBDL3-204ENST00000538145 DEPDC5O75140 1603 aa33.33■■■□□ 2.93
RHBDL3-204ENST00000538145 ANKRD50Q9ULJ7 1429 aa33.32■■■□□ 2.92
RHBDL3-204ENST00000538145 CLTCQ00610 1675 aaKnown RBP33.29■■■□□ 2.92
RHBDL3-204ENST00000538145 ESF1Q9H501 851 aaKnown RBP33.28■■■□□ 2.92
RHBDL3-204ENST00000538145 PRDM15P57071 1507 aaPredicted RBP33.28■■■□□ 2.92
RHBDL3-204ENST00000538145 KDM5DQ9BY66 1539 aa33.27■■■□□ 2.92
RHBDL3-204ENST00000538145 C3P01024 1663 aa33.26■■■□□ 2.92
RHBDL3-204ENST00000538145 ZC3H13Q5T200 1668 aaKnown RBP33.25■■■□□ 2.91
RHBDL3-204ENST00000538145 ZMYM3Q14202 1370 aa33.21■■■□□ 2.91
RHBDL3-204ENST00000538145 GCC2Q8IWJ2 1684 aa33.21■■■□□ 2.91
RHBDL3-204ENST00000538145 ABCC3O15438 1527 aa33.2■■■□□ 2.91
RHBDL3-204ENST00000538145 NAIPQ13075 1403 aa33.2■■■□□ 2.91
RHBDL3-204ENST00000538145 PLPPR3Q6T4P5 718 aa33.2■■■□□ 2.91
RHBDL3-204ENST00000538145 VWDEQ8N2E2 1590 aa33.19■■■□□ 2.9
RHBDL3-204ENST00000538145 HFM1A2PYH4 1435 aa33.19■■■□□ 2.9
RHBDL3-204ENST00000538145 WASHC2CQ9Y4E1 1318 aa33.19■■■□□ 2.9
RHBDL3-204ENST00000538145 CEBPAP49715 358 aaPredicted RBP33.18■■■□□ 2.9
RHBDL3-204ENST00000538145 PREX1Q8TCU6 1659 aa33.17■■■□□ 2.9
RHBDL3-204ENST00000538145 UNC13BO14795 1591 aa33.16■■■□□ 2.9
RHBDL3-204ENST00000538145 SETD1BQ9UPS6 1966 aaKnown RBP33.15■■■□□ 2.9
RHBDL3-204ENST00000538145 CEP152O94986 1710 aa33.14■■■□□ 2.9
RHBDL3-204ENST00000538145 LMTK2Q8IWU2 1503 aa33.13■■■□□ 2.89
RHBDL3-204ENST00000538145 KANK1Q14678 1352 aa33.11■■■□□ 2.89
RHBDL3-204ENST00000538145 NPATQ14207 1427 aa33.1■■■□□ 2.89
RHBDL3-204ENST00000538145 CAMSAP1Q5T5Y3 1602 aa33.1■■■□□ 2.89
RHBDL3-204ENST00000538145 PZPP20742 1482 aa33.1■■■□□ 2.89
RHBDL3-204ENST00000538145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.07■■■□□ 2.88
RHBDL3-204ENST00000538145 ARHGAP31Q2M1Z3 1444 aa33.06■■■□□ 2.88
RHBDL3-204ENST00000538145 HSPA2P54652 639 aa33.04■■■□□ 2.88
RHBDL3-204ENST00000538145 UHRF1BP1Q6BDS2 1440 aa33.03■■■□□ 2.88
RHBDL3-204ENST00000538145 IQGAP3Q86VI3 1631 aa33.02■■■□□ 2.88
RHBDL3-204ENST00000538145 EFCAB6Q5THR3 1501 aa32.99■■■□□ 2.87
RHBDL3-204ENST00000538145 TET3O43151 1660 aa32.98■■■□□ 2.87
RHBDL3-204ENST00000538145 SPATA31D1Q6ZQQ2 1576 aa32.96■■■□□ 2.87
RHBDL3-204ENST00000538145 NUP155O75694 1391 aa32.95■■■□□ 2.87
RHBDL3-204ENST00000538145 FBXO31Q5XUX0 539 aaPredicted RBP32.94■■■□□ 2.86
RHBDL3-204ENST00000538145 ERVK-7P63135 1459 aa32.92■■■□□ 2.86
RHBDL3-204ENST00000538145 SETD5Q9C0A6 1442 aa32.92■■■□□ 2.86
RHBDL3-204ENST00000538145 RPRD2Q5VT52 1461 aaKnown RBP32.91■■■□□ 2.86
RHBDL3-204ENST00000538145 CFAP65Q6ZU64 1925 aaKnown RBP32.91■■■□□ 2.86
RHBDL3-204ENST00000538145 MYO3AQ8NEV4 1616 aa32.9■■■□□ 2.86
RHBDL3-204ENST00000538145 TNRQ92752 1358 aa32.89■■■□□ 2.86
RHBDL3-204ENST00000538145 STRCQ7RTU9 1775 aa32.87■■■□□ 2.85
RHBDL3-204ENST00000538145 ZNF142P52746 1687 aaPredicted RBP32.87■■■□□ 2.85
RHBDL3-204ENST00000538145 ACIN1Q9UKV3 1341 aaKnown RBP32.86■■■□□ 2.85
RHBDL3-204ENST00000538145 E9PCH4 1651 aa32.85■■■□□ 2.85
RHBDL3-204ENST00000538145 NOS1P29475 1434 aa32.84■■■□□ 2.85
RHBDL3-204ENST00000538145 NLRP1Q9C000 1473 aa32.82■■■□□ 2.84
RHBDL3-204ENST00000538145 CEP170BQ9Y4F5 1589 aaPredicted RBP32.82■■■□□ 2.84
RHBDL3-204ENST00000538145 RAB3GAP2Q9H2M9 1393 aa32.79■■■□□ 2.84
RHBDL3-204ENST00000538145 A2ML1A8K2U0 1454 aa32.79■■■□□ 2.84
RHBDL3-204ENST00000538145 HRCP23327 699 aa32.77■■■□□ 2.84
RHBDL3-204ENST00000538145 TRIM52Q96A61 297 aa32.77■■■□□ 2.84
RHBDL3-204ENST00000538145 SYNMO15061 1565 aa32.76■■■□□ 2.84
RHBDL3-204ENST00000538145 TRIM26Q12899 539 aaPredicted RBP32.73■■■□□ 2.83
RHBDL3-204ENST00000538145 ILDR1Q86SU0 546 aaPredicted RBP32.71■■■□□ 2.83
RHBDL3-204ENST00000538145 DMRT2Q9Y5R5 561 aa32.71■■■□□ 2.83
RHBDL3-204ENST00000538145 PTPRTO14522 1441 aa32.68■■■□□ 2.82
RHBDL3-204ENST00000538145 SLC4A1APQ9BWU0 796 aaKnown RBP32.68■■■□□ 2.82
RHBDL3-204ENST00000538145 PIK3C2BO00750 1634 aa32.67■■■□□ 2.82
RHBDL3-204ENST00000538145 SLC52A1Q9NWF4 448 aa32.67■■■□□ 2.82
RHBDL3-204ENST00000538145 SPHKAPQ2M3C7 1700 aa32.67■■■□□ 2.82
RHBDL3-204ENST00000538145 UGGT1Q9NYU2 1555 aa32.66■■■□□ 2.82
RHBDL3-204ENST00000538145 KDM5AP29375 1690 aaKnown RBP32.66■■■□□ 2.82
RHBDL3-204ENST00000538145 PLA2R1Q13018 1463 aa32.66■■■□□ 2.82
RHBDL3-204ENST00000538145 UBR1Q8IWV7 1749 aa32.65■■■□□ 2.82
RHBDL3-204ENST00000538145 PKD2Q13563 968 aa32.63■■■□□ 2.81
RHBDL3-204ENST00000538145 MPHOSPH9Q99550 1183 aa32.63■■■□□ 2.81
RHBDL3-204ENST00000538145 IDI1Q13907 227 aa32.62■■■□□ 2.81
RHBDL3-204ENST00000538145 THEMISQ8N1K5 641 aaPredicted RBP32.59■■■□□ 2.81
RHBDL3-204ENST00000538145 TRPM2O94759 1503 aa32.58■■■□□ 2.81
RHBDL3-204ENST00000538145 ADGRB3O60242 1522 aa32.55■■■□□ 2.8
RHBDL3-204ENST00000538145 FBXO41Q8TF61 875 aa32.53■■■□□ 2.8
RHBDL3-204ENST00000538145 TMEM131LA2VDJ0 1609 aa32.51■■■□□ 2.79
RHBDL3-204ENST00000538145 SLIT1O75093 1534 aa32.51■■■□□ 2.79
RHBDL3-204ENST00000538145 ARHGAP23Q9P227 1491 aa32.51■■■□□ 2.79
RHBDL3-204ENST00000538145 NCKAP5LQ9HCH0 1330 aa32.49■■■□□ 2.79
RHBDL3-204ENST00000538145 CLTCL1P53675 1640 aa32.49■■■□□ 2.79
RHBDL3-204ENST00000538145 POLR1AO95602 1720 aaPredicted RBP32.48■■■□□ 2.79
RHBDL3-204ENST00000538145 MYO5BQ9ULV0 1848 aa32.48■■■□□ 2.79
RHBDL3-204ENST00000538145 CERKQ8TCT0 537 aa32.48■■■□□ 2.79
RHBDL3-204ENST00000538145 FOXD1Q16676 465 aa32.46■■■□□ 2.79
RHBDL3-204ENST00000538145 STAG3Q9UJ98 1225 aa32.46■■■□□ 2.79
RHBDL3-204ENST00000538145 TMEM2Q9UHN6 1383 aa32.44■■■□□ 2.78
RHBDL3-204ENST00000538145 LTBP4Q8N2S1 1624 aa32.43■■■□□ 2.78
RHBDL3-204ENST00000538145 NEURL4Q96JN8 1562 aa32.42■■■□□ 2.78
RHBDL3-204ENST00000538145 ANKLE2Q86XL3 938 aa32.42■■■□□ 2.78
RHBDL3-204ENST00000538145 KIF1BO60333 1816 aa32.41■■■□□ 2.78
RHBDL3-204ENST00000538145 MED14O60244 1454 aa32.41■■■□□ 2.78
RHBDL3-204ENST00000538145 SCAF11Q99590 1463 aaKnown RBP32.37■■■□□ 2.77
RHBDL3-204ENST00000538145 ZFYVE9O95405 1425 aa32.36■■■□□ 2.77
RHBDL3-204ENST00000538145 CCDC144AA2RUR9 1427 aa32.35■■■□□ 2.77
RHBDL3-204ENST00000538145 CHGAP10645 457 aaKnown RBP32.33■■■□□ 2.77
RHBDL3-204ENST00000538145 LTKP29376 864 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms