RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 TIAM1Q13009 1591 aa5.67□□□□□ -1.5
SEC23A-202ENST00000537403 ZC3H13Q5T200 1668 aaKnown RBP5.66□□□□□ -1.5
SEC23A-202ENST00000537403 CASKIN1Q8WXD9 1431 aa5.66□□□□□ -1.5
SEC23A-202ENST00000537403 DENND4BO75064 1496 aaPredicted RBP5.66□□□□□ -1.5
SEC23A-202ENST00000537403 DEPDC5O75140 1603 aa5.66□□□□□ -1.5
SEC23A-202ENST00000537403 EIF2AK4Q9P2K8 1649 aaKnown RBP5.66□□□□□ -1.5
SEC23A-202ENST00000537403 ZNF316A6NFI3 1004 aaPredicted RBP5.66□□□□□ -1.5
SEC23A-202ENST00000537403 MROH1Q8NDA8 1641 aa5.65□□□□□ -1.5
SEC23A-202ENST00000537403 RTN4Q9NQC3 1192 aaKnown RBP5.65□□□□□ -1.5
SEC23A-202ENST00000537403 CLSPNQ9HAW4 1339 aa5.65□□□□□ -1.5
SEC23A-202ENST00000537403 ZNF518AQ6AHZ1 1483 aa5.65□□□□□ -1.5
SEC23A-202ENST00000537403 ESF1Q9H501 851 aaKnown RBP5.65□□□□□ -1.51
SEC23A-202ENST00000537403 C9orf84Q5VXU9 1444 aa5.65□□□□□ -1.51
SEC23A-202ENST00000537403 YEATS2Q9ULM3 1422 aa5.65□□□□□ -1.51
SEC23A-202ENST00000537403 CAMSAP2Q08AD1 1489 aa5.64□□□□□ -1.51
SEC23A-202ENST00000537403 ATP10AO60312 1499 aa5.64□□□□□ -1.51
SEC23A-202ENST00000537403 ARHGEF5Q12774 1597 aa5.64□□□□□ -1.51
SEC23A-202ENST00000537403 TROQ12816 1431 aaPredicted RBP5.64□□□□□ -1.51
SEC23A-202ENST00000537403 FMN1Q68DA7 1419 aa5.64□□□□□ -1.51
SEC23A-202ENST00000537403 ZNF692Q9BU19 519 aaPredicted RBP5.64□□□□□ -1.51
SEC23A-202ENST00000537403 ALKQ9UM73 1620 aa5.64□□□□□ -1.51
SEC23A-202ENST00000537403 NEURL4Q96JN8 1562 aa5.63□□□□□ -1.51
SEC23A-202ENST00000537403 CHGAP10645 457 aaKnown RBP5.63□□□□□ -1.51
SEC23A-202ENST00000537403 CHIC2Q9UKJ5 165 aa5.63□□□□□ -1.51
SEC23A-202ENST00000537403 CLTCQ00610 1675 aaKnown RBP5.63□□□□□ -1.51
SEC23A-202ENST00000537403 XIRP1Q702N8 1843 aaKnown RBP5.63□□□□□ -1.51
SEC23A-202ENST00000537403 MAP3K1Q13233 1512 aa5.62□□□□□ -1.51
SEC23A-202ENST00000537403 TSPY4P0CV99 314 aa5.62□□□□□ -1.51
SEC23A-202ENST00000537403 TSPY10P0CW01 314 aa5.62□□□□□ -1.51
SEC23A-202ENST00000537403 KDM5DQ9BY66 1539 aa5.61□□□□□ -1.51
SEC23A-202ENST00000537403 STRCP1A6NGW2 1772 aa5.61□□□□□ -1.51
SEC23A-202ENST00000537403 SUPT6HQ7KZ85 1726 aaKnown RBP5.61□□□□□ -1.51
SEC23A-202ENST00000537403 KIAA1107Q9UPP5 1409 aa5.61□□□□□ -1.51
SEC23A-202ENST00000537403 STAG3Q9UJ98 1225 aa5.61□□□□□ -1.51
SEC23A-202ENST00000537403 MBD5Q9P267 1494 aa5.61□□□□□ -1.51
SEC23A-202ENST00000537403 ATP7AQ04656 1500 aa5.6□□□□□ -1.51
SEC23A-202ENST00000537403 NPATQ14207 1427 aa5.6□□□□□ -1.51
SEC23A-202ENST00000537403 EHBP1L1Q8N3D4 1523 aa5.6□□□□□ -1.51
SEC23A-202ENST00000537403 GPATCH8Q9UKJ3 1502 aaKnown RBP5.6□□□□□ -1.51
SEC23A-202ENST00000537403 SETD1BQ9UPS6 1966 aaKnown RBP5.6□□□□□ -1.51
SEC23A-202ENST00000537403 MTUS2Q5JR59 1369 aa5.6□□□□□ -1.51
SEC23A-202ENST00000537403 TONSLQ96HA7 1378 aa5.6□□□□□ -1.51
SEC23A-202ENST00000537403 TCOF1Q13428 1488 aaKnown RBP5.6□□□□□ -1.51
SEC23A-202ENST00000537403 VWDEQ8N2E2 1590 aa5.6□□□□□ -1.51
SEC23A-202ENST00000537403 DNMT1P26358 1616 aaKnown RBP5.6□□□□□ -1.51
SEC23A-202ENST00000537403 SLC24A1O60721 1099 aa5.59□□□□□ -1.51
SEC23A-202ENST00000537403 NEFMP07197 916 aa5.59□□□□□ -1.51
SEC23A-202ENST00000537403 PLA2R1Q13018 1463 aa5.59□□□□□ -1.51
SEC23A-202ENST00000537403 PTPRTO14522 1441 aa5.59□□□□□ -1.51
SEC23A-202ENST00000537403 SYCP2Q9BX26 1530 aa5.59□□□□□ -1.51
SEC23A-202ENST00000537403 CLIP1P30622 1438 aa5.58□□□□□ -1.52
SEC23A-202ENST00000537403 CEP170BQ9Y4F5 1589 aaPredicted RBP5.58□□□□□ -1.52
SEC23A-202ENST00000537403 KCNH8Q96L42 1107 aa5.58□□□□□ -1.52
SEC23A-202ENST00000537403 UBR1Q8IWV7 1749 aa5.58□□□□□ -1.52
SEC23A-202ENST00000537403 SYNMO15061 1565 aa5.57□□□□□ -1.52
SEC23A-202ENST00000537403 SPATA31D1Q6ZQQ2 1576 aa5.57□□□□□ -1.52
SEC23A-202ENST00000537403 RTEL1-TNFRSF6BF6WH68 1400 aa5.57□□□□□ -1.52
SEC23A-202ENST00000537403 GTF3C3Q9Y5Q9 886 aa5.57□□□□□ -1.52
SEC23A-202ENST00000537403 NCOA1Q15788 1441 aa5.57□□□□□ -1.52
SEC23A-202ENST00000537403 CEP162Q5TB80 1403 aa5.57□□□□□ -1.52
SEC23A-202ENST00000537403 TRAPPC8Q9Y2L5 1435 aa5.57□□□□□ -1.52
SEC23A-202ENST00000537403 PRDM15P57071 1507 aaPredicted RBP5.57□□□□□ -1.52
SEC23A-202ENST00000537403 ARHGAP5Q13017 1502 aa5.57□□□□□ -1.52
SEC23A-202ENST00000537403 PLEKHD1A6NEE1 506 aa5.56□□□□□ -1.52
SEC23A-202ENST00000537403 ZBTB47Q9UFB7 747 aaPredicted RBP5.56□□□□□ -1.52
SEC23A-202ENST00000537403 CAMSAP1Q5T5Y3 1602 aa5.56□□□□□ -1.52
SEC23A-202ENST00000537403 MED14O60244 1454 aa5.56□□□□□ -1.52
SEC23A-202ENST00000537403 SCAPERQ9BY12 1400 aa5.56□□□□□ -1.52
SEC23A-202ENST00000537403 DDX10Q13206 875 aaKnown RBP5.56□□□□□ -1.52
SEC23A-202ENST00000537403 CANXP27824 592 aaKnown RBP5.55□□□□□ -1.52
SEC23A-202ENST00000537403 BCL11AQ9H165 835 aa5.55□□□□□ -1.52
SEC23A-202ENST00000537403 KDM2AQ9Y2K7 1162 aa5.55□□□□□ -1.52
SEC23A-202ENST00000537403 CNTLNQ9NXG0 1405 aa5.55□□□□□ -1.52
SEC23A-202ENST00000537403 PLEKHH2Q8IVE3 1493 aa5.55□□□□□ -1.52
SEC23A-202ENST00000537403 PIK3C2BO00750 1634 aa5.55□□□□□ -1.52
SEC23A-202ENST00000537403 ILDR1Q86SU0 546 aaPredicted RBP5.55□□□□□ -1.52
SEC23A-202ENST00000537403 RRP7BPQ9NSQ0 103 aa5.54□□□□□ -1.52
SEC23A-202ENST00000537403 CLEC11AQ9Y240 323 aa5.54□□□□□ -1.52
SEC23A-202ENST00000537403 PTPRKQ15262 1439 aa5.54□□□□□ -1.52
SEC23A-202ENST00000537403 CEP152O94986 1710 aa5.54□□□□□ -1.52
SEC23A-202ENST00000537403 LMTK2Q8IWU2 1503 aa5.54□□□□□ -1.52
SEC23A-202ENST00000537403 ZBTB12Q9Y330 459 aaPredicted RBP5.54□□□□□ -1.52
SEC23A-202ENST00000537403 UGGT1Q9NYU2 1555 aa5.54□□□□□ -1.52
SEC23A-202ENST00000537403 IQGAP1P46940 1657 aa5.53□□□□□ -1.52
SEC23A-202ENST00000537403 NWD1Q149M9 1564 aa5.53□□□□□ -1.52
SEC23A-202ENST00000537403 IFNLR1Q8IU57 520 aaPredicted RBP5.53□□□□□ -1.52
SEC23A-202ENST00000537403 RAPGEF3O95398 923 aa5.53□□□□□ -1.52
SEC23A-202ENST00000537403 SSUH2Q9Y2M2 353 aa5.53□□□□□ -1.52
SEC23A-202ENST00000537403 SHANK2Q9UPX8 1470 aa5.52□□□□□ -1.52
SEC23A-202ENST00000537403 SPDYE2BA6NHP3 402 aa5.52□□□□□ -1.53
SEC23A-202ENST00000537403 SPDYE6P0CI01 402 aa5.52□□□□□ -1.53
SEC23A-202ENST00000537403 SPDYE2Q495Y8 402 aa5.52□□□□□ -1.53
SEC23A-202ENST00000537403 RTL5Q5HYW3 569 aaPredicted RBP5.52□□□□□ -1.53
SEC23A-202ENST00000537403 PZPP20742 1482 aa5.52□□□□□ -1.53
SEC23A-202ENST00000537403 PROM2Q8N271 834 aa5.52□□□□□ -1.53
SEC23A-202ENST00000537403 VASPP50552 380 aaPredicted RBP5.51□□□□□ -1.53
SEC23A-202ENST00000537403 MYT1Q01538 1121 aa5.51□□□□□ -1.53
SEC23A-202ENST00000537403 FAM9BQ8IZU0 186 aa5.51□□□□□ -1.53
SEC23A-202ENST00000537403 CFDP1Q9UEE9 299 aaPredicted RBP5.51□□□□□ -1.53
SEC23A-202ENST00000537403 GCC2Q8IWJ2 1684 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms