RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
TRIM25-202ENST00000537230 PRKCSHP14314 528 aaPredicted RBP17.71■□□□□ 0.43
TRIM25-202ENST00000537230 DHX29Q7Z478 1369 aaKnown RBP17.71■□□□□ 0.43
TRIM25-202ENST00000537230 PLEKHH2Q8IVE3 1493 aa17.71■□□□□ 0.43
TRIM25-202ENST00000537230 MAST1Q9Y2H9 1570 aa17.69■□□□□ 0.42
TRIM25-202ENST00000537230 PLA2R1Q13018 1463 aa17.69■□□□□ 0.42
TRIM25-202ENST00000537230 RGL3Q3MIN7 710 aa17.68■□□□□ 0.42
TRIM25-202ENST00000537230 ST20-MTHFSA0A0A6YYL1 179 aa17.68■□□□□ 0.42
TRIM25-202ENST00000537230 UNC13BO14795 1591 aa17.67■□□□□ 0.42
TRIM25-202ENST00000537230 PLCH2O75038 1416 aa17.66■□□□□ 0.42
TRIM25-202ENST00000537230 IRX6P78412 446 aaPredicted RBP17.66■□□□□ 0.42
TRIM25-202ENST00000537230 CCDC144AA2RUR9 1427 aa17.66■□□□□ 0.42
TRIM25-202ENST00000537230 PLXNC1O60486 1568 aa17.65■□□□□ 0.42
TRIM25-202ENST00000537230 TRAPPC8Q9Y2L5 1435 aa17.64■□□□□ 0.41
TRIM25-202ENST00000537230 NBPF1Q3BBV0 1214 aa17.62■□□□□ 0.41
TRIM25-202ENST00000537230 ROCK2O75116 1388 aaKnown RBP17.62■□□□□ 0.41
TRIM25-202ENST00000537230 EFCAB2Q5VUJ9 269 aa17.62■□□□□ 0.41
TRIM25-202ENST00000537230 UHRF1BP1LA0JNW5 1464 aa17.62■□□□□ 0.41
TRIM25-202ENST00000537230 IQGAP3Q86VI3 1631 aa17.61■□□□□ 0.41
TRIM25-202ENST00000537230 ABCC1P33527 1531 aa17.61■□□□□ 0.41
TRIM25-202ENST00000537230 PRAG1Q86YV5 1406 aa17.61■□□□□ 0.41
TRIM25-202ENST00000537230 AFAP1Q8N556 730 aa17.6■□□□□ 0.41
TRIM25-202ENST00000537230 DUOX2Q9NRD8 1548 aa17.6■□□□□ 0.41
TRIM25-202ENST00000537230 SENP3-EIF4A1A0A087X0R7 540 aa17.6■□□□□ 0.41
TRIM25-202ENST00000537230 A2MP01023 1474 aa17.6■□□□□ 0.41
TRIM25-202ENST00000537230 TRPM1Q7Z4N2 1603 aa17.59■□□□□ 0.41
TRIM25-202ENST00000537230 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.41
TRIM25-202ENST00000537230 MSH5O43196 834 aa17.57■□□□□ 0.4
TRIM25-202ENST00000537230 MAGI2Q86UL8 1455 aa17.57■□□□□ 0.4
TRIM25-202ENST00000537230 ZBED9Q6R2W3 1325 aa17.56■□□□□ 0.4
TRIM25-202ENST00000537230 ERBINQ96RT1 1412 aa17.56■□□□□ 0.4
TRIM25-202ENST00000537230 SPAG9O60271 1321 aaKnown RBP17.53■□□□□ 0.4
TRIM25-202ENST00000537230 ZFYVE16Q7Z3T8 1539 aa17.5■□□□□ 0.39
TRIM25-202ENST00000537230 E9PCH4 1651 aa17.5■□□□□ 0.39
TRIM25-202ENST00000537230 ATP10AO60312 1499 aa17.5■□□□□ 0.39
TRIM25-202ENST00000537230 WDR7Q9Y4E6 1490 aa17.49■□□□□ 0.39
TRIM25-202ENST00000537230 GPRASP1Q5JY77 1395 aa17.49■□□□□ 0.39
TRIM25-202ENST00000537230 PNISRQ8TF01 805 aaKnown RBP17.48■□□□□ 0.39
TRIM25-202ENST00000537230 TESK2Q96S53 571 aa17.48■□□□□ 0.39
TRIM25-202ENST00000537230 DISP3Q9P2K9 1392 aa17.47■□□□□ 0.39
TRIM25-202ENST00000537230 FANCAO15360 1455 aa17.47■□□□□ 0.39
TRIM25-202ENST00000537230 TMC1Q8TDI8 760 aa17.47■□□□□ 0.39
TRIM25-202ENST00000537230 PRDM15P57071 1507 aaPredicted RBP17.46■□□□□ 0.39
TRIM25-202ENST00000537230 ARAP3Q8WWN8 1544 aa17.45■□□□□ 0.38
TRIM25-202ENST00000537230 ABCA9Q8IUA7 1624 aa17.44■□□□□ 0.38
TRIM25-202ENST00000537230 RTEL1-TNFRSF6BF6WH68 1400 aa17.44■□□□□ 0.38
TRIM25-202ENST00000537230 FANCIQ9NVI1 1328 aa17.43■□□□□ 0.38
TRIM25-202ENST00000537230 SCAPERQ9BY12 1400 aa17.43■□□□□ 0.38
TRIM25-202ENST00000537230 COL17A1Q9UMD9 1497 aaPredicted RBP17.42■□□□□ 0.38
TRIM25-202ENST00000537230 PER1O15534 1290 aaPredicted RBP17.42■□□□□ 0.38
TRIM25-202ENST00000537230 ATP7AQ04656 1500 aa17.42■□□□□ 0.38
TRIM25-202ENST00000537230 MYT1LQ9UL68 1186 aa17.42■□□□□ 0.38
TRIM25-202ENST00000537230 MYBBP1AQ9BQG0 1328 aaKnown RBP17.42■□□□□ 0.38
TRIM25-202ENST00000537230 LAMC1P11047 1609 aa17.41■□□□□ 0.38
TRIM25-202ENST00000537230 INO80Q9ULG1 1556 aaPredicted RBP17.41■□□□□ 0.38
TRIM25-202ENST00000537230 ASXL2Q76L83 1435 aa17.41■□□□□ 0.38
TRIM25-202ENST00000537230 ADGRL1O94910 1474 aa17.41■□□□□ 0.38
TRIM25-202ENST00000537230 KIF3BO15066 747 aa17.41■□□□□ 0.38
TRIM25-202ENST00000537230 EIF2AK4Q9P2K8 1649 aaKnown RBP17.41■□□□□ 0.38
TRIM25-202ENST00000537230 DEPDC5O75140 1603 aa17.4■□□□□ 0.38
TRIM25-202ENST00000537230 PPP4R2Q9NY27 417 aa17.4■□□□□ 0.38
TRIM25-202ENST00000537230 SPHKAPQ2M3C7 1700 aa17.39■□□□□ 0.38
TRIM25-202ENST00000537230 CLTCL1P53675 1640 aa17.39■□□□□ 0.38
TRIM25-202ENST00000537230 RALBP1Q15311 655 aa17.39■□□□□ 0.37
TRIM25-202ENST00000537230 TRPM2O94759 1503 aa17.39■□□□□ 0.37
TRIM25-202ENST00000537230 RNF17Q9BXT8 1623 aaKnown RBP17.38■□□□□ 0.37
TRIM25-202ENST00000537230 LRPPRCP42704 1394 aaKnown RBP17.38■□□□□ 0.37
TRIM25-202ENST00000537230 B4GALNT3Q6L9W6 998 aa17.38■□□□□ 0.37
TRIM25-202ENST00000537230 MADDQ8WXG6 1647 aa17.38■□□□□ 0.37
TRIM25-202ENST00000537230 BRD4O60885 1362 aaPredicted RBP17.38■□□□□ 0.37
TRIM25-202ENST00000537230 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
TRIM25-202ENST00000537230 CC2D1BQ5T0F9 858 aaKnown RBP17.37■□□□□ 0.37
TRIM25-202ENST00000537230 PARD3Q8TEW0 1356 aa17.37■□□□□ 0.37
TRIM25-202ENST00000537230 PTPRTO14522 1441 aa17.37■□□□□ 0.37
TRIM25-202ENST00000537230 PANK3Q9H999 370 aa17.37■□□□□ 0.37
TRIM25-202ENST00000537230 CEP152O94986 1710 aa17.36■□□□□ 0.37
TRIM25-202ENST00000537230 ERICH6BQ5W0A0 696 aa17.36■□□□□ 0.37
TRIM25-202ENST00000537230 ERICH6Q7L0X2 663 aa17.36■□□□□ 0.37
TRIM25-202ENST00000537230 KTN1Q86UP2 1357 aaKnown RBP17.36■□□□□ 0.37
TRIM25-202ENST00000537230 UGGT1Q9NYU2 1555 aa17.35■□□□□ 0.37
TRIM25-202ENST00000537230 TET3O43151 1660 aa17.35■□□□□ 0.37
TRIM25-202ENST00000537230 NUDCQ9Y266 331 aa17.35■□□□□ 0.37
TRIM25-202ENST00000537230 MROH1Q8NDA8 1641 aa17.34■□□□□ 0.37
TRIM25-202ENST00000537230 VWDEQ8N2E2 1590 aa17.34■□□□□ 0.37
TRIM25-202ENST00000537230 TMF1P82094 1093 aa17.34■□□□□ 0.37
TRIM25-202ENST00000537230 SALL2Q9Y467 1007 aaPredicted RBP17.33■□□□□ 0.37
TRIM25-202ENST00000537230 NLRP13Q86W25 1043 aa17.33■□□□□ 0.36
TRIM25-202ENST00000537230 KIDINS220Q9ULH0 1771 aa17.32■□□□□ 0.36
TRIM25-202ENST00000537230 IQGAP1P46940 1657 aa17.31■□□□□ 0.36
TRIM25-202ENST00000537230 KANK1Q14678 1352 aa17.31■□□□□ 0.36
TRIM25-202ENST00000537230 CFAP65Q6ZU64 1925 aaKnown RBP17.29■□□□□ 0.36
TRIM25-202ENST00000537230 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
TRIM25-202ENST00000537230 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.35
TRIM25-202ENST00000537230 PPRC1Q5VV67 1664 aaKnown RBP17.25■□□□□ 0.35
TRIM25-202ENST00000537230 SCAF11Q99590 1463 aaKnown RBP17.25■□□□□ 0.35
TRIM25-202ENST00000537230 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
TRIM25-202ENST00000537230 ADGRF5Q8IZF2 1346 aa17.25■□□□□ 0.35
TRIM25-202ENST00000537230 EFCAB6Q5THR3 1501 aa17.24■□□□□ 0.35
TRIM25-202ENST00000537230 NPM1P06748 294 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRIM25-202ENST00000537230 WASHC2CQ9Y4E1 1318 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms