RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ESF1Q9H501 851 aaKnown RBP27.26■■□□□ 1.95
DDX55-204ENST00000536079 MROH1Q8NDA8 1641 aa27.25■■□□□ 1.95
DDX55-204ENST00000536079 EIF2AK4Q9P2K8 1649 aaKnown RBP27.25■■□□□ 1.95
DDX55-204ENST00000536079 RNF17Q9BXT8 1623 aaKnown RBP27.24■■□□□ 1.95
DDX55-204ENST00000536079 CNTLNQ9NXG0 1405 aa27.24■■□□□ 1.95
DDX55-204ENST00000536079 CLTCQ00610 1675 aaKnown RBP27.24■■□□□ 1.95
DDX55-204ENST00000536079 ZMYM3Q14202 1370 aa27.23■■□□□ 1.95
DDX55-204ENST00000536079 PPP6R1Q9UPN7 881 aa27.23■■□□□ 1.95
DDX55-204ENST00000536079 ANKRD50Q9ULJ7 1429 aa27.21■■□□□ 1.95
DDX55-204ENST00000536079 C3P01024 1663 aa27.21■■□□□ 1.95
DDX55-204ENST00000536079 WASHC2CQ9Y4E1 1318 aa27.18■■□□□ 1.94
DDX55-204ENST00000536079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.18■■□□□ 1.947e-10■■■■□ 26.7
DDX55-204ENST00000536079 KDM5DQ9BY66 1539 aa27.17■■□□□ 1.94
DDX55-204ENST00000536079 MROH2AA6NES4 1674 aa27.15■■□□□ 1.94
DDX55-204ENST00000536079 ABCC3O15438 1527 aa27.15■■□□□ 1.94
DDX55-204ENST00000536079 DEPDC5O75140 1603 aa27.13■■□□□ 1.93
DDX55-204ENST00000536079 PRDM15P57071 1507 aaPredicted RBP27.13■■□□□ 1.93
DDX55-204ENST00000536079 FBXO31Q5XUX0 539 aaPredicted RBP27.11■■□□□ 1.93
DDX55-204ENST00000536079 FAM135AQ9P2D6 1515 aa27.1■■□□□ 1.93
DDX55-204ENST00000536079 NAIPQ13075 1403 aa27.09■■□□□ 1.93
DDX55-204ENST00000536079 LMTK3Q96Q04 1460 aa27.08■■□□□ 1.93
DDX55-204ENST00000536079 CEP152O94986 1710 aa27.08■■□□□ 1.93
DDX55-204ENST00000536079 VWDEQ8N2E2 1590 aa27.08■■□□□ 1.93
DDX55-204ENST00000536079 NPATQ14207 1427 aa27.05■■□□□ 1.92
DDX55-204ENST00000536079 PZPP20742 1482 aa27.05■■□□□ 1.92
DDX55-204ENST00000536079 ZC3H13Q5T200 1668 aaKnown RBP27.03■■□□□ 1.92
DDX55-204ENST00000536079 HFM1A2PYH4 1435 aa27.02■■□□□ 1.92
DDX55-204ENST00000536079 KANK1Q14678 1352 aa27.02■■□□□ 1.92
DDX55-204ENST00000536079 HSPA2P54652 639 aa27.02■■□□□ 1.92
DDX55-204ENST00000536079 CAMSAP1Q5T5Y3 1602 aa27.01■■□□□ 1.92
DDX55-204ENST00000536079 UNC13BO14795 1591 aa27.01■■□□□ 1.92
DDX55-204ENST00000536079 LMTK2Q8IWU2 1503 aa27■■□□□ 1.91
DDX55-204ENST00000536079 GCC2Q8IWJ2 1684 aa26.98■■□□□ 1.91
DDX55-204ENST00000536079 PREX1Q8TCU6 1659 aa26.97■■□□□ 1.91
DDX55-204ENST00000536079 UHRF1BP1Q6BDS2 1440 aa26.97■■□□□ 1.91
DDX55-204ENST00000536079 ARHGAP31Q2M1Z3 1444 aa26.96■■□□□ 1.91
DDX55-204ENST00000536079 NUP155O75694 1391 aa26.96■■□□□ 1.91
DDX55-204ENST00000536079 TNRQ92752 1358 aa26.96■■□□□ 1.91
DDX55-204ENST00000536079 SETD1BQ9UPS6 1966 aaKnown RBP26.95■■□□□ 1.91
DDX55-204ENST00000536079 ERVK-7P63135 1459 aa26.94■■□□□ 1.9
DDX55-204ENST00000536079 SPATA31D1Q6ZQQ2 1576 aa26.92■■□□□ 1.9
DDX55-204ENST00000536079 EFCAB6Q5THR3 1501 aa26.91■■□□□ 1.9
DDX55-204ENST00000536079 MYO3AQ8NEV4 1616 aa26.91■■□□□ 1.9
DDX55-204ENST00000536079 IQGAP3Q86VI3 1631 aa26.89■■□□□ 1.9
DDX55-204ENST00000536079 CFAP65Q6ZU64 1925 aaKnown RBP26.88■■□□□ 1.89
DDX55-204ENST00000536079 TET3O43151 1660 aa26.86■■□□□ 1.89
DDX55-204ENST00000536079 CEP170BQ9Y4F5 1589 aaPredicted RBP26.84■■□□□ 1.89
DDX55-204ENST00000536079 NOS1P29475 1434 aa26.83■■□□□ 1.89
DDX55-204ENST00000536079 SETD5Q9C0A6 1442 aa26.83■■□□□ 1.89
DDX55-204ENST00000536079 A2ML1A8K2U0 1454 aa26.83■■□□□ 1.89
DDX55-204ENST00000536079 TRIM52Q96A61 297 aa26.83■■□□□ 1.89
DDX55-204ENST00000536079 ZNF142P52746 1687 aaPredicted RBP26.82■■□□□ 1.88
DDX55-204ENST00000536079 E9PCH4 1651 aa26.81■■□□□ 1.88
DDX55-204ENST00000536079 SYNMO15061 1565 aa26.8■■□□□ 1.88
DDX55-204ENST00000536079 NLRP1Q9C000 1473 aa26.8■■□□□ 1.88
DDX55-204ENST00000536079 RPRD2Q5VT52 1461 aaKnown RBP26.79■■□□□ 1.88
DDX55-204ENST00000536079 RAB3GAP2Q9H2M9 1393 aa26.77■■□□□ 1.88
DDX55-204ENST00000536079 IDI1Q13907 227 aa26.76■■□□□ 1.87
DDX55-204ENST00000536079 STRCQ7RTU9 1775 aa26.74■■□□□ 1.87
DDX55-204ENST00000536079 UGGT1Q9NYU2 1555 aa26.72■■□□□ 1.87
DDX55-204ENST00000536079 NCKAP5LQ9HCH0 1330 aa26.72■■□□□ 1.87
DDX55-204ENST00000536079 PKD2Q13563 968 aa26.72■■□□□ 1.87
DDX55-204ENST00000536079 SLC4A1APQ9BWU0 796 aaKnown RBP26.71■■□□□ 1.87
DDX55-204ENST00000536079 PIK3C2BO00750 1634 aa26.69■■□□□ 1.86
DDX55-204ENST00000536079 FOXD1Q16676 465 aa26.69■■□□□ 1.86
DDX55-204ENST00000536079 PTPRTO14522 1441 aa26.67■■□□□ 1.86
DDX55-204ENST00000536079 THEMISQ8N1K5 641 aaPredicted RBP26.67■■□□□ 1.86
DDX55-204ENST00000536079 MPHOSPH9Q99550 1183 aa26.67■■□□□ 1.86
DDX55-204ENST00000536079 UBR1Q8IWV7 1749 aa26.67■■□□□ 1.86
DDX55-204ENST00000536079 PLA2R1Q13018 1463 aa26.67■■□□□ 1.86
DDX55-204ENST00000536079 SLC52A1Q9NWF4 448 aa26.66■■□□□ 1.86
DDX55-204ENST00000536079 SPHKAPQ2M3C7 1700 aa26.59■■□□□ 1.85
DDX55-204ENST00000536079 HRCP23327 699 aa26.59■■□□□ 1.85
DDX55-204ENST00000536079 LTKP29376 864 aa26.59■■□□□ 1.85
DDX55-204ENST00000536079 TRIM26Q12899 539 aaPredicted RBP26.59■■□□□ 1.85
DDX55-204ENST00000536079 STAG3Q9UJ98 1225 aa26.59■■□□□ 1.85
DDX55-204ENST00000536079 ADGRB3O60242 1522 aa26.59■■□□□ 1.85
DDX55-204ENST00000536079 ARHGAP23Q9P227 1491 aa26.58■■□□□ 1.85
DDX55-204ENST00000536079 ANKLE2Q86XL3 938 aa26.57■■□□□ 1.84
DDX55-204ENST00000536079 NEURL4Q96JN8 1562 aa26.57■■□□□ 1.84
DDX55-204ENST00000536079 CHGAP10645 457 aaKnown RBP26.56■■□□□ 1.84
DDX55-204ENST00000536079 TMEM2Q9UHN6 1383 aa26.56■■□□□ 1.84
DDX55-204ENST00000536079 SLIT1O75093 1534 aa26.55■■□□□ 1.84
DDX55-204ENST00000536079 TRPM2O94759 1503 aa26.55■■□□□ 1.84
DDX55-204ENST00000536079 TMEM131LA2VDJ0 1609 aa26.55■■□□□ 1.84
DDX55-204ENST00000536079 CLTCL1P53675 1640 aa26.54■■□□□ 1.84
DDX55-204ENST00000536079 TXNDC2Q86VQ3 553 aa26.53■■□□□ 1.84
DDX55-204ENST00000536079 DMRT2Q9Y5R5 561 aa26.53■■□□□ 1.84
DDX55-204ENST00000536079 KDM5AP29375 1690 aaKnown RBP26.52■■□□□ 1.84
DDX55-204ENST00000536079 MYO5BQ9ULV0 1848 aa26.51■■□□□ 1.83
DDX55-204ENST00000536079 ACIN1Q9UKV3 1341 aaKnown RBP26.51■■□□□ 1.83
DDX55-204ENST00000536079 SCAF11Q99590 1463 aaKnown RBP26.49■■□□□ 1.83
DDX55-204ENST00000536079 POLR1AO95602 1720 aaPredicted RBP26.49■■□□□ 1.83
DDX55-204ENST00000536079 MED14O60244 1454 aa26.49■■□□□ 1.83
DDX55-204ENST00000536079 NPHP4O75161 1426 aaPredicted RBP26.48■■□□□ 1.83
DDX55-204ENST00000536079 ZFYVE9O95405 1425 aa26.48■■□□□ 1.83
DDX55-204ENST00000536079 NUTM2DQ5VT03 806 aaPredicted RBP26.47■■□□□ 1.83
DDX55-204ENST00000536079 RIMS2Q9UQ26 1411 aa26.46■■□□□ 1.83
DDX55-204ENST00000536079 SENP3Q9H4L4 574 aaPredicted RBP26.45■■□□□ 1.82
DDX55-204ENST00000536079 EID1Q9Y6B2 187 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms