RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 ERBINQ96RT1 1412 aa33.96■■■■□ 3.03
VPS37C-202ENST00000535818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.96■■■■□ 3.03
VPS37C-202ENST00000535818 NCOA1Q15788 1441 aa33.96■■■■□ 3.03
VPS37C-202ENST00000535818 RNF17Q9BXT8 1623 aaKnown RBP33.95■■■■□ 3.03
VPS37C-202ENST00000535818 ZMYM3Q14202 1370 aa33.94■■■■□ 3.02
VPS37C-202ENST00000535818 KDM5DQ9BY66 1539 aa33.94■■■■□ 3.02
VPS37C-202ENST00000535818 FAM135AQ9P2D6 1515 aa33.94■■■■□ 3.02
VPS37C-202ENST00000535818 ITGAEP38570 1179 aa33.92■■■■□ 3.02
VPS37C-202ENST00000535818 RRBP1Q9P2E9 1410 aaKnown RBP33.92■■■■□ 3.02
VPS37C-202ENST00000535818 WASHC2CQ9Y4E1 1318 aa33.9■■■■□ 3.02
VPS37C-202ENST00000535818 PTPRKQ15262 1439 aa33.89■■■■□ 3.02
VPS37C-202ENST00000535818 PREX1Q8TCU6 1659 aa33.89■■■■□ 3.02
VPS37C-202ENST00000535818 LMTK3Q96Q04 1460 aa33.88■■■■□ 3.01
VPS37C-202ENST00000535818 MROH1Q8NDA8 1641 aa33.84■■■■□ 3.01
VPS37C-202ENST00000535818 ZC3H13Q5T200 1668 aaKnown RBP33.84■■■■□ 3.01
VPS37C-202ENST00000535818 UHRF1BP1Q6BDS2 1440 aa33.83■■■■□ 3.01
VPS37C-202ENST00000535818 NPATQ14207 1427 aa33.82■■■■□ 3
VPS37C-202ENST00000535818 SETD1BQ9UPS6 1966 aaKnown RBP33.81■■■■□ 3
VPS37C-202ENST00000535818 ROCK1Q13464 1354 aa33.81■■■■□ 3
VPS37C-202ENST00000535818 ANKRD50Q9ULJ7 1429 aa33.79■■■■□ 3
VPS37C-202ENST00000535818 ABCC3O15438 1527 aa33.79■■■■□ 3
VPS37C-202ENST00000535818 PRDM15P57071 1507 aaPredicted RBP33.79■■■■□ 3
VPS37C-202ENST00000535818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.78■■■■□ 3
VPS37C-202ENST00000535818 DEPDC5O75140 1603 aa33.78■■■■□ 3
VPS37C-202ENST00000535818 CEP152O94986 1710 aa33.77■■■■□ 3
VPS37C-202ENST00000535818 KANK1Q14678 1352 aa33.75■■■□□ 2.99
VPS37C-202ENST00000535818 PZPP20742 1482 aa33.75■■■□□ 2.99
VPS37C-202ENST00000535818 HSPA2P54652 639 aa33.74■■■□□ 2.99
VPS37C-202ENST00000535818 CAMSAP1Q5T5Y3 1602 aa33.71■■■□□ 2.99
VPS37C-202ENST00000535818 MYO3AQ8NEV4 1616 aa33.68■■■□□ 2.98
VPS37C-202ENST00000535818 FBXO31Q5XUX0 539 aaPredicted RBP33.67■■■□□ 2.98
VPS37C-202ENST00000535818 TNRQ92752 1358 aa33.64■■■□□ 2.98
VPS37C-202ENST00000535818 VWDEQ8N2E2 1590 aa33.62■■■□□ 2.97
VPS37C-202ENST00000535818 ZNF142P52746 1687 aaPredicted RBP33.6■■■□□ 2.97
VPS37C-202ENST00000535818 LMTK2Q8IWU2 1503 aa33.59■■■□□ 2.97
VPS37C-202ENST00000535818 UNC13BO14795 1591 aa33.59■■■□□ 2.97
VPS37C-202ENST00000535818 CEP170BQ9Y4F5 1589 aaPredicted RBP33.59■■■□□ 2.97
VPS37C-202ENST00000535818 ARHGAP31Q2M1Z3 1444 aa33.57■■■□□ 2.96
VPS37C-202ENST00000535818 ERVK-7P63135 1459 aa33.56■■■□□ 2.96
VPS37C-202ENST00000535818 SPATA31D1Q6ZQQ2 1576 aa33.56■■■□□ 2.96
VPS37C-202ENST00000535818 GCC2Q8IWJ2 1684 aa33.53■■■□□ 2.96
VPS37C-202ENST00000535818 A2ML1A8K2U0 1454 aa33.53■■■□□ 2.96
VPS37C-202ENST00000535818 CFAP65Q6ZU64 1925 aaKnown RBP33.53■■■□□ 2.96
VPS37C-202ENST00000535818 EFCAB6Q5THR3 1501 aa33.51■■■□□ 2.95
VPS37C-202ENST00000535818 NAIPQ13075 1403 aa33.5■■■□□ 2.95
VPS37C-202ENST00000535818 NLRP1Q9C000 1473 aa33.5■■■□□ 2.95
VPS37C-202ENST00000535818 TET3O43151 1660 aa33.47■■■□□ 2.95
VPS37C-202ENST00000535818 HFM1A2PYH4 1435 aa33.46■■■□□ 2.95
VPS37C-202ENST00000535818 NUP155O75694 1391 aa33.46■■■□□ 2.95
VPS37C-202ENST00000535818 IQGAP3Q86VI3 1631 aa33.45■■■□□ 2.95
VPS37C-202ENST00000535818 STRCQ7RTU9 1775 aa33.44■■■□□ 2.94
VPS37C-202ENST00000535818 UGGT1Q9NYU2 1555 aa33.41■■■□□ 2.94
VPS37C-202ENST00000535818 RPRD2Q5VT52 1461 aaKnown RBP33.4■■■□□ 2.94
VPS37C-202ENST00000535818 PLA2R1Q13018 1463 aa33.39■■■□□ 2.94
VPS37C-202ENST00000535818 DMRT2Q9Y5R5 561 aa33.38■■■□□ 2.93
VPS37C-202ENST00000535818 THEMISQ8N1K5 641 aaPredicted RBP33.35■■■□□ 2.93
VPS37C-202ENST00000535818 NOS1P29475 1434 aa33.34■■■□□ 2.93
VPS37C-202ENST00000535818 SYNMO15061 1565 aa33.33■■■□□ 2.93
VPS37C-202ENST00000535818 E9PCH4 1651 aa33.33■■■□□ 2.93
VPS37C-202ENST00000535818 NCKAP5LQ9HCH0 1330 aa33.31■■■□□ 2.92
VPS37C-202ENST00000535818 PKD2Q13563 968 aa33.31■■■□□ 2.92
VPS37C-202ENST00000535818 TRIM52Q96A61 297 aa33.3■■■□□ 2.92
VPS37C-202ENST00000535818 PTPRTO14522 1441 aa33.28■■■□□ 2.92
VPS37C-202ENST00000535818 PIK3C2BO00750 1634 aa33.28■■■□□ 2.92
VPS37C-202ENST00000535818 UBR1Q8IWV7 1749 aa33.28■■■□□ 2.92
VPS37C-202ENST00000535818 STAG3Q9UJ98 1225 aa33.27■■■□□ 2.92
VPS37C-202ENST00000535818 POLR1AO95602 1720 aaPredicted RBP33.25■■■□□ 2.91
VPS37C-202ENST00000535818 IDI1Q13907 227 aa33.23■■■□□ 2.91
VPS37C-202ENST00000535818 SLC52A1Q9NWF4 448 aa33.23■■■□□ 2.91
VPS37C-202ENST00000535818 ANKLE2Q86XL3 938 aa33.22■■■□□ 2.91
VPS37C-202ENST00000535818 KDM5AP29375 1690 aaKnown RBP33.18■■■□□ 2.9
VPS37C-202ENST00000535818 SETD5Q9C0A6 1442 aa33.18■■■□□ 2.9
VPS37C-202ENST00000535818 ADGRB3O60242 1522 aa33.18■■■□□ 2.9
VPS37C-202ENST00000535818 NEURL4Q96JN8 1562 aa33.16■■■□□ 2.9
VPS37C-202ENST00000535818 SPHKAPQ2M3C7 1700 aa33.14■■■□□ 2.9
VPS37C-202ENST00000535818 SLC4A1APQ9BWU0 796 aaKnown RBP33.13■■■□□ 2.89
VPS37C-202ENST00000535818 SLIT1O75093 1534 aa33.12■■■□□ 2.89
VPS37C-202ENST00000535818 ARHGAP23Q9P227 1491 aa33.11■■■□□ 2.89
VPS37C-202ENST00000535818 NPHP4O75161 1426 aaPredicted RBP33.1■■■□□ 2.89
VPS37C-202ENST00000535818 TMEM2Q9UHN6 1383 aa33.09■■■□□ 2.89
VPS37C-202ENST00000535818 CHGAP10645 457 aaKnown RBP33.09■■■□□ 2.89
VPS37C-202ENST00000535818 EID1Q9Y6B2 187 aa33.09■■■□□ 2.89
VPS37C-202ENST00000535818 SCAF11Q99590 1463 aaKnown RBP33.09■■■□□ 2.89
VPS37C-202ENST00000535818 ACIN1Q9UKV3 1341 aaKnown RBP33.08■■■□□ 2.89
VPS37C-202ENST00000535818 MED14O60244 1454 aa33.07■■■□□ 2.88
VPS37C-202ENST00000535818 TXNDC2Q86VQ3 553 aa33.07■■■□□ 2.88
VPS37C-202ENST00000535818 RAB3GAP2Q9H2M9 1393 aa33.06■■■□□ 2.88
VPS37C-202ENST00000535818 IQGAP1P46940 1657 aa33.05■■■□□ 2.88
VPS37C-202ENST00000535818 TMEM131LA2VDJ0 1609 aa33.05■■■□□ 2.88
VPS37C-202ENST00000535818 MYO5BQ9ULV0 1848 aa33.04■■■□□ 2.88
VPS37C-202ENST00000535818 TRPM2O94759 1503 aa33.02■■■□□ 2.88
VPS37C-202ENST00000535818 LTKP29376 864 aa33.02■■■□□ 2.88
VPS37C-202ENST00000535818 ZNF335Q9H4Z2 1342 aaPredicted RBP32.99■■■□□ 2.87
VPS37C-202ENST00000535818 MPHOSPH9Q99550 1183 aa32.98■■■□□ 2.87
VPS37C-202ENST00000535818 CLTCL1P53675 1640 aa32.96■■■□□ 2.87
VPS37C-202ENST00000535818 CERKQ8TCT0 537 aa32.96■■■□□ 2.87
VPS37C-202ENST00000535818 LTBP4Q8N2S1 1624 aa32.95■■■□□ 2.86
VPS37C-202ENST00000535818 RIMS2Q9UQ26 1411 aa32.94■■■□□ 2.86
VPS37C-202ENST00000535818 HDGFP51858 240 aaKnown RBP32.94■■■□□ 2.86
VPS37C-202ENST00000535818 FOXD1Q16676 465 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms