RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 RNF123Q5XPI4 1314 aa18.46■□□□□ 0.55
LPCAT3-203ENST00000535479 TROQ12816 1431 aaPredicted RBP18.46■□□□□ 0.55
LPCAT3-203ENST00000535479 DISP3Q9P2K9 1392 aa18.46■□□□□ 0.55
LPCAT3-203ENST00000535479 ADAMTS8Q9UP79 889 aa18.46■□□□□ 0.55
LPCAT3-203ENST00000535479 KIAA0586Q9BVV6 1533 aa18.46■□□□□ 0.54
LPCAT3-203ENST00000535479 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.45■□□□□ 0.54
LPCAT3-203ENST00000535479 KIAA0556O60303 1618 aa18.44■□□□□ 0.54
LPCAT3-203ENST00000535479 KDM5CP41229 1560 aa18.44■□□□□ 0.54
LPCAT3-203ENST00000535479 C9orf84Q5VXU9 1444 aa18.43■□□□□ 0.54
LPCAT3-203ENST00000535479 RAPGEF6Q8TEU7 1601 aa18.43■□□□□ 0.54
LPCAT3-203ENST00000535479 NLRP13Q86W25 1043 aa18.43■□□□□ 0.54
LPCAT3-203ENST00000535479 MBD5Q9P267 1494 aa18.43■□□□□ 0.54
LPCAT3-203ENST00000535479 KTN1Q86UP2 1357 aaKnown RBP18.42■□□□□ 0.54
LPCAT3-203ENST00000535479 TNNT2P45379 298 aaPredicted RBP18.41■□□□□ 0.54
LPCAT3-203ENST00000535479 RALBP1Q15311 655 aa18.39■□□□□ 0.53
LPCAT3-203ENST00000535479 PER1O15534 1290 aaPredicted RBP18.39■□□□□ 0.53
LPCAT3-203ENST00000535479 BACH2Q9BYV9 841 aa18.39■□□□□ 0.53
LPCAT3-203ENST00000535479 NEUROD2Q15784 382 aa18.38■□□□□ 0.53
LPCAT3-203ENST00000535479 GRIN2AQ12879 1464 aa18.38■□□□□ 0.53
LPCAT3-203ENST00000535479 LRPPRCP42704 1394 aaKnown RBP18.37■□□□□ 0.53
LPCAT3-203ENST00000535479 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
LPCAT3-203ENST00000535479 ARXQ96QS3 562 aa18.36■□□□□ 0.53
LPCAT3-203ENST00000535479 BRD4O60885 1362 aaPredicted RBP18.35■□□□□ 0.53
LPCAT3-203ENST00000535479 MRC2Q9UBG0 1479 aa18.35■□□□□ 0.53
LPCAT3-203ENST00000535479 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
LPCAT3-203ENST00000535479 BRPF3Q9ULD4 1205 aa18.34■□□□□ 0.53
LPCAT3-203ENST00000535479 TESK2Q96S53 571 aa18.33■□□□□ 0.53
LPCAT3-203ENST00000535479 RALGAPBQ86X10 1494 aa18.33■□□□□ 0.52
LPCAT3-203ENST00000535479 CCDC144AA2RUR9 1427 aa18.32■□□□□ 0.52
LPCAT3-203ENST00000535479 TCERG1O14776 1098 aaKnown RBP18.32■□□□□ 0.52
LPCAT3-203ENST00000535479 BCAR3O75815 825 aa18.32■□□□□ 0.52
LPCAT3-203ENST00000535479 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
LPCAT3-203ENST00000535479 ERCC6Q03468 1493 aa18.31■□□□□ 0.52
LPCAT3-203ENST00000535479 WDR43Q15061 677 aaKnown RBP eCLIP18.3■□□□□ 0.52
LPCAT3-203ENST00000535479 RRP7AQ9Y3A4 280 aaKnown RBP18.3■□□□□ 0.52
LPCAT3-203ENST00000535479 ATP10BO94823 1461 aa18.3■□□□□ 0.52
LPCAT3-203ENST00000535479 PLEKHH1Q9ULM0 1364 aa18.29■□□□□ 0.52
LPCAT3-203ENST00000535479 CEP170Q5SW79 1584 aa18.29■□□□□ 0.52
LPCAT3-203ENST00000535479 BCL2L13Q9BXK5 485 aa18.27■□□□□ 0.52
LPCAT3-203ENST00000535479 KNSTRNQ9Y448 316 aa18.27■□□□□ 0.52
LPCAT3-203ENST00000535479 PARD3Q8TEW0 1356 aa18.27■□□□□ 0.52
LPCAT3-203ENST00000535479 APAF1O14727 1248 aa18.27■□□□□ 0.52
LPCAT3-203ENST00000535479 POLR1AO95602 1720 aaPredicted RBP18.26■□□□□ 0.51
LPCAT3-203ENST00000535479 EIF4G3O43432 1585 aaKnown RBP18.26■□□□□ 0.51
LPCAT3-203ENST00000535479 MAGI1Q96QZ7 1491 aaPredicted RBP18.25■□□□□ 0.51
LPCAT3-203ENST00000535479 TMF1P82094 1093 aa18.25■□□□□ 0.51
LPCAT3-203ENST00000535479 PPP2R1AP30153 589 aa18.25■□□□□ 0.51
LPCAT3-203ENST00000535479 SPRYD3Q8NCJ5 442 aa18.24■□□□□ 0.51
LPCAT3-203ENST00000535479 PRAG1Q86YV5 1406 aa18.24■□□□□ 0.51
LPCAT3-203ENST00000535479 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
LPCAT3-203ENST00000535479 DAXXQ9UER7 740 aaPredicted RBP18.24■□□□□ 0.51
LPCAT3-203ENST00000535479 PLEKHH2Q8IVE3 1493 aa18.24■□□□□ 0.51
LPCAT3-203ENST00000535479 TNNQ9UQP3 1299 aa18.23■□□□□ 0.51
LPCAT3-203ENST00000535479 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
LPCAT3-203ENST00000535479 UHRF1BP1Q6BDS2 1440 aa18.23■□□□□ 0.51
LPCAT3-203ENST00000535479 IFT140Q96RY7 1462 aa18.23■□□□□ 0.51
LPCAT3-203ENST00000535479 CARMIL2Q6F5E8 1435 aa18.22■□□□□ 0.51
LPCAT3-203ENST00000535479 ARID4BQ4LE39 1312 aaPredicted RBP18.22■□□□□ 0.51
LPCAT3-203ENST00000535479 CHGAP10645 457 aaKnown RBP18.22■□□□□ 0.51
LPCAT3-203ENST00000535479 PLA2R1Q13018 1463 aa18.22■□□□□ 0.51
LPCAT3-203ENST00000535479 AFAP1Q8N556 730 aa18.22■□□□□ 0.51
LPCAT3-203ENST00000535479 NFKBIBQ15653 356 aa18.21■□□□□ 0.51
LPCAT3-203ENST00000535479 A2MP01023 1474 aa18.21■□□□□ 0.51
LPCAT3-203ENST00000535479 DUSP27Q5VZP5 1158 aa18.21■□□□□ 0.51
LPCAT3-203ENST00000535479 FAM135AQ9P2D6 1515 aa18.2■□□□□ 0.5
LPCAT3-203ENST00000535479 FRAT2O75474 233 aaPredicted RBP18.2■□□□□ 0.5
LPCAT3-203ENST00000535479 PANK1Q8TE04 598 aa18.2■□□□□ 0.5
LPCAT3-203ENST00000535479 ERBINQ96RT1 1412 aa18.2■□□□□ 0.5
LPCAT3-203ENST00000535479 ADGRL2O95490 1459 aa18.2■□□□□ 0.5
LPCAT3-203ENST00000535479 ADGBQ8N7X0 1667 aa18.2■□□□□ 0.5
LPCAT3-203ENST00000535479 CDC42BPAQ5VT25 1732 aa18.19■□□□□ 0.5
LPCAT3-203ENST00000535479 CLUAP1Q96AJ1 413 aa18.19■□□□□ 0.5
LPCAT3-203ENST00000535479 SEC24BO95487 1268 aa18.18■□□□□ 0.5
LPCAT3-203ENST00000535479 SLKQ9H2G2 1235 aaPredicted RBP18.18■□□□□ 0.5
LPCAT3-203ENST00000535479 COG6Q9Y2V7 657 aa18.18■□□□□ 0.5
LPCAT3-203ENST00000535479 IGHDP01880 384 aa18.17■□□□□ 0.5
LPCAT3-203ENST00000535479 PTPRGP23470 1445 aa18.17■□□□□ 0.5
LPCAT3-203ENST00000535479 CANXP27824 592 aaKnown RBP18.16■□□□□ 0.5
LPCAT3-203ENST00000535479 ABCC10Q5T3U5 1492 aa18.16■□□□□ 0.5
LPCAT3-203ENST00000535479 GOLGA2Q08379 1002 aa18.16■□□□□ 0.5
LPCAT3-203ENST00000535479 SYCP2Q9BX26 1530 aa18.16■□□□□ 0.5
LPCAT3-203ENST00000535479 KDM5DQ9BY66 1539 aa18.16■□□□□ 0.5
LPCAT3-203ENST00000535479 CFAP70Q5T0N1 1121 aa18.16■□□□□ 0.5
LPCAT3-203ENST00000535479 MAGI2Q86UL8 1455 aa18.15■□□□□ 0.5
LPCAT3-203ENST00000535479 ITSN2Q9NZM3 1697 aa18.15■□□□□ 0.5
LPCAT3-203ENST00000535479 PDE3BQ13370 1112 aa18.15■□□□□ 0.5
LPCAT3-203ENST00000535479 C8orf34Q49A92 452 aa18.15■□□□□ 0.5
LPCAT3-203ENST00000535479 SAFB2Q14151 953 aaKnown RBP eCLIP18.14■□□□□ 0.49
LPCAT3-203ENST00000535479 CROCC2H7BZ55 1655 aa18.14■□□□□ 0.49
LPCAT3-203ENST00000535479 AMER1Q5JTC6 1135 aaPredicted RBP18.12■□□□□ 0.49
LPCAT3-203ENST00000535479 ARHGAP5Q13017 1502 aa18.12■□□□□ 0.49
LPCAT3-203ENST00000535479 SYNJ2O15056 1496 aa18.11■□□□□ 0.49
LPCAT3-203ENST00000535479 KDM2BQ8NHM5 1336 aa18.1■□□□□ 0.49
LPCAT3-203ENST00000535479 MS4A1P11836 297 aa18.1■□□□□ 0.49
LPCAT3-203ENST00000535479 COL17A1Q9UMD9 1497 aaPredicted RBP18.1■□□□□ 0.49
LPCAT3-203ENST00000535479 EIF5BO60841 1220 aaKnown RBP18.09■□□□□ 0.49
LPCAT3-203ENST00000535479 SAMD9LQ8IVG5 1584 aa18.09■□□□□ 0.49
LPCAT3-203ENST00000535479 CCDC141Q6ZP82 1450 aa18.08■□□□□ 0.49
LPCAT3-203ENST00000535479 FAM161AQ3B820 660 aa18.07■□□□□ 0.48
LPCAT3-203ENST00000535479 TMEM132EQ6IEE7 984 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms