RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 ADCY10Q96PN6 1610 aa13.76□□□□□ -0.21
DDB1-204ENST00000535147 EXOC6Q8TAG9 804 aa13.76□□□□□ -0.21
DDB1-204ENST00000535147 BRD4O60885 1362 aaPredicted RBP13.75□□□□□ -0.21
DDB1-204ENST00000535147 ANP32AP39687 249 aaKnown RBP13.75□□□□□ -0.21
DDB1-204ENST00000535147 CARMIL2Q6F5E8 1435 aa13.74□□□□□ -0.21
DDB1-204ENST00000535147 RALBP1Q15311 655 aa13.74□□□□□ -0.21
DDB1-204ENST00000535147 RGL3Q3MIN7 710 aa13.74□□□□□ -0.21
DDB1-204ENST00000535147 ARHGEF12Q9NZN5 1544 aa13.74□□□□□ -0.21
DDB1-204ENST00000535147 RRP1P56182 461 aaKnown RBP13.74□□□□□ -0.21
DDB1-204ENST00000535147 IPO9Q96P70 1041 aaKnown RBP13.74□□□□□ -0.21
DDB1-204ENST00000535147 CDC42BPAQ5VT25 1732 aa13.74□□□□□ -0.21
DDB1-204ENST00000535147 ABCC10Q5T3U5 1492 aa13.73□□□□□ -0.21
DDB1-204ENST00000535147 NBPF1Q3BBV0 1214 aa13.73□□□□□ -0.21
DDB1-204ENST00000535147 ATP10BO94823 1461 aa13.72□□□□□ -0.21
DDB1-204ENST00000535147 MAGI1Q96QZ7 1491 aaPredicted RBP13.72□□□□□ -0.21
DDB1-204ENST00000535147 RCAN3Q9UKA8 241 aa13.72□□□□□ -0.21
DDB1-204ENST00000535147 SYNJ2O15056 1496 aa13.72□□□□□ -0.21
DDB1-204ENST00000535147 KCNA4P22459 653 aa13.71□□□□□ -0.21
DDB1-204ENST00000535147 CDCA7LQ96GN5 454 aa13.71□□□□□ -0.21
DDB1-204ENST00000535147 MYT1LQ9UL68 1186 aa13.71□□□□□ -0.21
DDB1-204ENST00000535147 SHANK2Q9UPX8 1470 aa13.71□□□□□ -0.22
DDB1-204ENST00000535147 AMER1Q5JTC6 1135 aaPredicted RBP13.71□□□□□ -0.22
DDB1-204ENST00000535147 NPM2Q86SE8 214 aaKnown RBP13.7□□□□□ -0.22
DDB1-204ENST00000535147 NLRP13Q86W25 1043 aa13.7□□□□□ -0.22
DDB1-204ENST00000535147 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
DDB1-204ENST00000535147 CC2D1BQ5T0F9 858 aaKnown RBP13.69□□□□□ -0.22
DDB1-204ENST00000535147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.22
DDB1-204ENST00000535147 PTPRGP23470 1445 aa13.69□□□□□ -0.22
DDB1-204ENST00000535147 KTN1Q86UP2 1357 aaKnown RBP13.68□□□□□ -0.22
DDB1-204ENST00000535147 KDM5DQ9BY66 1539 aa13.68□□□□□ -0.22
DDB1-204ENST00000535147 PER1O15534 1290 aaPredicted RBP13.68□□□□□ -0.22
DDB1-204ENST00000535147 PARD3Q8TEW0 1356 aa13.67□□□□□ -0.22
DDB1-204ENST00000535147 PLIN1O60240 522 aa13.67□□□□□ -0.22
DDB1-204ENST00000535147 ABCA8O94911 1581 aa13.67□□□□□ -0.22
DDB1-204ENST00000535147 NUP160Q12769 1436 aa13.66□□□□□ -0.22
DDB1-204ENST00000535147 PRAG1Q86YV5 1406 aa13.66□□□□□ -0.22
DDB1-204ENST00000535147 E9PCH4 1651 aa13.66□□□□□ -0.22
DDB1-204ENST00000535147 CCDC144AA2RUR9 1427 aa13.66□□□□□ -0.22
DDB1-204ENST00000535147 FAM135AQ9P2D6 1515 aa13.66□□□□□ -0.22
DDB1-204ENST00000535147 ERCC6Q03468 1493 aa13.65□□□□□ -0.22
DDB1-204ENST00000535147 SKAP1Q86WV1 359 aa13.65□□□□□ -0.22
DDB1-204ENST00000535147 DISP3Q9P2K9 1392 aa13.64□□□□□ -0.23
DDB1-204ENST00000535147 PANK3Q9H999 370 aa13.63□□□□□ -0.23
DDB1-204ENST00000535147 PDE4AP27815 886 aa13.63□□□□□ -0.23
DDB1-204ENST00000535147 PDE3BQ13370 1112 aa13.63□□□□□ -0.23
DDB1-204ENST00000535147 TESK2Q96S53 571 aa13.63□□□□□ -0.23
DDB1-204ENST00000535147 PLA2R1Q13018 1463 aa13.62□□□□□ -0.23
DDB1-204ENST00000535147 CCDC141Q6ZP82 1450 aa13.62□□□□□ -0.23
DDB1-204ENST00000535147 TRPM1Q7Z4N2 1603 aa13.62□□□□□ -0.23
DDB1-204ENST00000535147 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
DDB1-204ENST00000535147 SAMD9LQ8IVG5 1584 aa13.61□□□□□ -0.23
DDB1-204ENST00000535147 RTL5Q5HYW3 569 aaPredicted RBP13.61□□□□□ -0.23
DDB1-204ENST00000535147 A2MP01023 1474 aa13.61□□□□□ -0.23
DDB1-204ENST00000535147 ARHGEF5Q12774 1597 aa13.61□□□□□ -0.23
DDB1-204ENST00000535147 BACH2Q9BYV9 841 aa13.6□□□□□ -0.23
DDB1-204ENST00000535147 CRBNQ96SW2 442 aa13.59□□□□□ -0.23
DDB1-204ENST00000535147 COL17A1Q9UMD9 1497 aaPredicted RBP13.59□□□□□ -0.23
DDB1-204ENST00000535147 GPRASP1Q5JY77 1395 aa13.59□□□□□ -0.23
DDB1-204ENST00000535147 LAS1LQ9Y4W2 734 aaKnown RBP13.59□□□□□ -0.23
DDB1-204ENST00000535147 CDC42BPBQ9Y5S2 1711 aa13.57□□□□□ -0.24
DDB1-204ENST00000535147 ARXQ96QS3 562 aa13.57□□□□□ -0.24
DDB1-204ENST00000535147 SYCP2Q9BX26 1530 aa13.57□□□□□ -0.24
DDB1-204ENST00000535147 C20orf194Q5TEA3 1177 aa13.57□□□□□ -0.24
DDB1-204ENST00000535147 ERBINQ96RT1 1412 aa13.57□□□□□ -0.24
DDB1-204ENST00000535147 ADAMTS8Q9UP79 889 aa13.56□□□□□ -0.24
DDB1-204ENST00000535147 TMF1P82094 1093 aa13.56□□□□□ -0.24
DDB1-204ENST00000535147 PLEKHH2Q8IVE3 1493 aa13.56□□□□□ -0.24
DDB1-204ENST00000535147 RSPH4AQ5TD94 716 aa13.55□□□□□ -0.24
DDB1-204ENST00000535147 WASHC2CQ9Y4E1 1318 aa13.55□□□□□ -0.24
DDB1-204ENST00000535147 BLMP54132 1417 aaPredicted RBP13.55□□□□□ -0.24
DDB1-204ENST00000535147 MS4A1P11836 297 aa13.54□□□□□ -0.24
DDB1-204ENST00000535147 PRDM15P57071 1507 aaPredicted RBP13.54□□□□□ -0.24
DDB1-204ENST00000535147 PREX2Q70Z35 1606 aa13.54□□□□□ -0.24
DDB1-204ENST00000535147 ARHGAP5Q13017 1502 aa13.53□□□□□ -0.24
DDB1-204ENST00000535147 NEFMP07197 916 aa13.51□□□□□ -0.25
DDB1-204ENST00000535147 UNC13BO14795 1591 aa13.51□□□□□ -0.25
DDB1-204ENST00000535147 TTC37Q6PGP7 1564 aa13.51□□□□□ -0.25
DDB1-204ENST00000535147 PLEKHH1Q9ULM0 1364 aa13.5□□□□□ -0.25
DDB1-204ENST00000535147 MYO5CQ9NQX4 1742 aa13.5□□□□□ -0.25
DDB1-204ENST00000535147 MAGI2Q86UL8 1455 aa13.5□□□□□ -0.25
DDB1-204ENST00000535147 PPP2R1AP30153 589 aa13.49□□□□□ -0.25
DDB1-204ENST00000535147 KNSTRNQ9Y448 316 aa13.49□□□□□ -0.25
DDB1-204ENST00000535147 ZMYM4Q5VZL5 1548 aa13.49□□□□□ -0.25
DDB1-204ENST00000535147 WDR43Q15061 677 aaKnown RBP eCLIP13.49□□□□□ -0.25
DDB1-204ENST00000535147 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.48□□□□□ -0.25
DDB1-204ENST00000535147 DUSP27Q5VZP5 1158 aa13.48□□□□□ -0.25
DDB1-204ENST00000535147 LAMC1P11047 1609 aa13.48□□□□□ -0.25
DDB1-204ENST00000535147 WDR7Q9Y4E6 1490 aa13.47□□□□□ -0.25
DDB1-204ENST00000535147 INSRP06213 1382 aa13.47□□□□□ -0.25
DDB1-204ENST00000535147 SLC4A3P48751 1232 aa13.47□□□□□ -0.25
DDB1-204ENST00000535147 IQGAP3Q86VI3 1631 aa13.46□□□□□ -0.25
DDB1-204ENST00000535147 TULP1O00294 542 aaPredicted RBP13.46□□□□□ -0.26
DDB1-204ENST00000535147 EIF2AK4Q9P2K8 1649 aaKnown RBP13.46□□□□□ -0.26
DDB1-204ENST00000535147 MAST1Q9Y2H9 1570 aa13.45□□□□□ -0.26
DDB1-204ENST00000535147 CCDC146Q8IYE0 955 aa13.45□□□□□ -0.26
DDB1-204ENST00000535147 KDM2BQ8NHM5 1336 aa13.45□□□□□ -0.26
DDB1-204ENST00000535147 GOLGA2Q08379 1002 aa13.44□□□□□ -0.26
DDB1-204ENST00000535147 ATP10AO60312 1499 aa13.44□□□□□ -0.26
DDB1-204ENST00000535147 IL27Q8NEV9 243 aa13.43□□□□□ -0.26
DDB1-204ENST00000535147 DUOX2Q9NRD8 1548 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms