RNA–Protein interactions for RNA: ENST00000534510.5

CTSB-232, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-232ENST00000534510 TRPM1Q7Z4N2 1603 aa23.91■■□□□ 1.42
CTSB-232ENST00000534510 NUDCQ9Y266 331 aa23.91■■□□□ 1.42
CTSB-232ENST00000534510 DCAF11Q8TEB1 546 aa23.89■■□□□ 1.42
CTSB-232ENST00000534510 KDM2AQ9Y2K7 1162 aa23.89■■□□□ 1.42
CTSB-232ENST00000534510 SYCP2Q9BX26 1530 aa23.89■■□□□ 1.41
CTSB-232ENST00000534510 ST20-MTHFSA0A0A6YYL1 179 aa23.87■■□□□ 1.41
CTSB-232ENST00000534510 CNGB1Q14028 1251 aaPredicted RBP23.87■■□□□ 1.41
CTSB-232ENST00000534510 TTC37Q6PGP7 1564 aa23.87■■□□□ 1.41
CTSB-232ENST00000534510 PNISRQ8TF01 805 aaKnown RBP23.87■■□□□ 1.41
CTSB-232ENST00000534510 PLXNC1O60486 1568 aa23.86■■□□□ 1.41
CTSB-232ENST00000534510 CCDC144AA2RUR9 1427 aa23.86■■□□□ 1.41
CTSB-232ENST00000534510 TMC1Q8TDI8 760 aa23.86■■□□□ 1.41
CTSB-232ENST00000534510 ARHGAP5Q13017 1502 aa23.86■■□□□ 1.41
CTSB-232ENST00000534510 B4GALNT3Q6L9W6 998 aa23.85■■□□□ 1.41
CTSB-232ENST00000534510 PRAG1Q86YV5 1406 aa23.85■■□□□ 1.41
CTSB-232ENST00000534510 BRD4O60885 1362 aaPredicted RBP23.85■■□□□ 1.41
CTSB-232ENST00000534510 MYO5CQ9NQX4 1742 aa23.84■■□□□ 1.41
CTSB-232ENST00000534510 LAMC1P11047 1609 aa23.84■■□□□ 1.41
CTSB-232ENST00000534510 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
CTSB-232ENST00000534510 IQGAP3Q86VI3 1631 aa23.83■■□□□ 1.41
CTSB-232ENST00000534510 MYBBP1AQ9BQG0 1328 aaKnown RBP23.83■■□□□ 1.41
CTSB-232ENST00000534510 RALBP1Q15311 655 aa23.83■■□□□ 1.41
CTSB-232ENST00000534510 LRPPRCP42704 1394 aaKnown RBP23.83■■□□□ 1.4
CTSB-232ENST00000534510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.82■■□□□ 1.45e-6■□□□□ 9.5
CTSB-232ENST00000534510 MSH5O43196 834 aa23.82■■□□□ 1.4
CTSB-232ENST00000534510 PLEKHH2Q8IVE3 1493 aa23.82■■□□□ 1.4
CTSB-232ENST00000534510 EIF2AK4Q9P2K8 1649 aaKnown RBP23.78■■□□□ 1.4
CTSB-232ENST00000534510 GPRASP1Q5JY77 1395 aa23.77■■□□□ 1.4
CTSB-232ENST00000534510 ABCC2Q92887 1545 aa23.77■■□□□ 1.4
CTSB-232ENST00000534510 PLA2R1Q13018 1463 aa23.77■■□□□ 1.4
CTSB-232ENST00000534510 A2MP01023 1474 aa23.76■■□□□ 1.39
CTSB-232ENST00000534510 PRDM15P57071 1507 aaPredicted RBP23.75■■□□□ 1.39
CTSB-232ENST00000534510 DUOX2Q9NRD8 1548 aa23.75■■□□□ 1.39
CTSB-232ENST00000534510 MAGI2Q86UL8 1455 aa23.73■■□□□ 1.39
CTSB-232ENST00000534510 COL17A1Q9UMD9 1497 aaPredicted RBP23.73■■□□□ 1.39
CTSB-232ENST00000534510 PARD3Q8TEW0 1356 aa23.72■■□□□ 1.39
CTSB-232ENST00000534510 ATP10AO60312 1499 aa23.71■■□□□ 1.39
CTSB-232ENST00000534510 ERBINQ96RT1 1412 aa23.71■■□□□ 1.39
CTSB-232ENST00000534510 ERICH6Q7L0X2 663 aa23.69■■□□□ 1.38
CTSB-232ENST00000534510 NLRP13Q86W25 1043 aa23.69■■□□□ 1.38
CTSB-232ENST00000534510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.68■■□□□ 1.38
CTSB-232ENST00000534510 RGL3Q3MIN7 710 aa23.67■■□□□ 1.38
CTSB-232ENST00000534510 CCDC136Q96JN2 1154 aa23.66■■□□□ 1.38
CTSB-232ENST00000534510 RNF17Q9BXT8 1623 aaKnown RBP23.66■■□□□ 1.38
CTSB-232ENST00000534510 NBPF1Q3BBV0 1214 aa23.65■■□□□ 1.38
CTSB-232ENST00000534510 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
CTSB-232ENST00000534510 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
CTSB-232ENST00000534510 WASHC2CQ9Y4E1 1318 aa23.64■■□□□ 1.37
CTSB-232ENST00000534510 UHRF1BP1LA0JNW5 1464 aa23.63■■□□□ 1.37
CTSB-232ENST00000534510 PLCH2O75038 1416 aa23.62■■□□□ 1.37
CTSB-232ENST00000534510 ZCCHC11Q5TAX3 1644 aaKnown RBP23.62■■□□□ 1.37
CTSB-232ENST00000534510 ABCC1P33527 1531 aa23.62■■□□□ 1.37
CTSB-232ENST00000534510 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
CTSB-232ENST00000534510 DISP3Q9P2K9 1392 aa23.61■■□□□ 1.37
CTSB-232ENST00000534510 PER1O15534 1290 aaPredicted RBP23.61■■□□□ 1.37
CTSB-232ENST00000534510 SENP3-EIF4A1A0A087X0R7 540 aa23.6■■□□□ 1.37
CTSB-232ENST00000534510 TESK2Q96S53 571 aa23.6■■□□□ 1.37
CTSB-232ENST00000534510 INSRP06213 1382 aa23.6■■□□□ 1.37
CTSB-232ENST00000534510 PDE3BQ13370 1112 aa23.59■■□□□ 1.37
CTSB-232ENST00000534510 RRP1P56182 461 aaKnown RBP23.56■■□□□ 1.36
CTSB-232ENST00000534510 TMF1P82094 1093 aa23.56■■□□□ 1.36
CTSB-232ENST00000534510 EFCAB2Q5VUJ9 269 aa23.56■■□□□ 1.36
CTSB-232ENST00000534510 MADDQ8WXG6 1647 aa23.54■■□□□ 1.36
CTSB-232ENST00000534510 BLMP54132 1417 aaPredicted RBP23.54■■□□□ 1.36
CTSB-232ENST00000534510 IQGAP1P46940 1657 aa23.53■■□□□ 1.36
CTSB-232ENST00000534510 RCAN3Q9UKA8 241 aa23.52■■□□□ 1.36
CTSB-232ENST00000534510 CEP152O94986 1710 aa23.51■■□□□ 1.35
CTSB-232ENST00000534510 SPHKAPQ2M3C7 1700 aa23.51■■□□□ 1.35
CTSB-232ENST00000534510 TRPM2O94759 1503 aa23.51■■□□□ 1.35
CTSB-232ENST00000534510 PANK3Q9H999 370 aa23.51■■□□□ 1.35
CTSB-232ENST00000534510 TRAPPC8Q9Y2L5 1435 aa23.5■■□□□ 1.35
CTSB-232ENST00000534510 ARAP3Q8WWN8 1544 aa23.5■■□□□ 1.35
CTSB-232ENST00000534510 CC2D1BQ5T0F9 858 aaKnown RBP23.49■■□□□ 1.35
CTSB-232ENST00000534510 RTEL1-TNFRSF6BF6WH68 1400 aa23.48■■□□□ 1.35
CTSB-232ENST00000534510 ZFYVE16Q7Z3T8 1539 aa23.47■■□□□ 1.35
CTSB-232ENST00000534510 DEPDC5O75140 1603 aa23.47■■□□□ 1.35
CTSB-232ENST00000534510 SALL2Q9Y467 1007 aaPredicted RBP23.45■■□□□ 1.34
CTSB-232ENST00000534510 NOP58Q9Y2X3 529 aaKnown RBP23.44■■□□□ 1.34
CTSB-232ENST00000534510 TET3O43151 1660 aa23.44■■□□□ 1.34
CTSB-232ENST00000534510 SPAG9O60271 1321 aaKnown RBP23.44■■□□□ 1.34
CTSB-232ENST00000534510 WDR7Q9Y4E6 1490 aa23.43■■□□□ 1.34
CTSB-232ENST00000534510 SYNMO15061 1565 aa23.43■■□□□ 1.34
CTSB-232ENST00000534510 EXOC6Q8TAG9 804 aa23.43■■□□□ 1.34
CTSB-232ENST00000534510 CLTCL1P53675 1640 aa23.43■■□□□ 1.34
CTSB-232ENST00000534510 PTPRTO14522 1441 aa23.42■■□□□ 1.34
CTSB-232ENST00000534510 STAC3Q96MF2 364 aa23.42■■□□□ 1.34
CTSB-232ENST00000534510 MYT1LQ9UL68 1186 aa23.42■■□□□ 1.34
CTSB-232ENST00000534510 SCAPERQ9BY12 1400 aa23.42■■□□□ 1.34
CTSB-232ENST00000534510 SCAF11Q99590 1463 aaKnown RBP23.4■■□□□ 1.34
CTSB-232ENST00000534510 ANP32AP39687 249 aaKnown RBP23.4■■□□□ 1.34
CTSB-232ENST00000534510 KIAA1210Q9ULL0 1709 aa23.39■■□□□ 1.33
CTSB-232ENST00000534510 CDCA7LQ96GN5 454 aa23.38■■□□□ 1.33
CTSB-232ENST00000534510 INO80Q9ULG1 1556 aaPredicted RBP23.38■■□□□ 1.33
CTSB-232ENST00000534510 CDCA8Q53HL2 280 aa23.38■■□□□ 1.33
CTSB-232ENST00000534510 VWDEQ8N2E2 1590 aa23.36■■□□□ 1.33
CTSB-232ENST00000534510 NEURL4Q96JN8 1562 aa23.36■■□□□ 1.33
CTSB-232ENST00000534510 ATP7AQ04656 1500 aa23.35■■□□□ 1.33
CTSB-232ENST00000534510 ABCA9Q8IUA7 1624 aa23.35■■□□□ 1.33
CTSB-232ENST00000534510 TCERG1O14776 1098 aaKnown RBP23.35■■□□□ 1.33
CTSB-232ENST00000534510 KNSTRNQ9Y448 316 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms