RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 AGLP35573 1532 aa32.22■■■□□ 2.75
PACSIN3-209ENST00000532457 ERBINQ96RT1 1412 aa32.2■■■□□ 2.75
PACSIN3-209ENST00000532457 PZPP20742 1482 aa32.2■■■□□ 2.75
PACSIN3-209ENST00000532457 NUP155O75694 1391 aa32.17■■■□□ 2.74
PACSIN3-209ENST00000532457 SIN3AQ96ST3 1273 aa32.16■■■□□ 2.74
PACSIN3-209ENST00000532457 FOXD1Q16676 465 aa32.16■■■□□ 2.74
PACSIN3-209ENST00000532457 SLC4A1APQ9BWU0 796 aaKnown RBP32.16■■■□□ 2.74
PACSIN3-209ENST00000532457 SIGLEC1Q9BZZ2 1709 aa32.15■■■□□ 2.74
PACSIN3-209ENST00000532457 KIF3BO15066 747 aa32.15■■■□□ 2.74
PACSIN3-209ENST00000532457 EIF2AK4Q9P2K8 1649 aaKnown RBP32.15■■■□□ 2.74
PACSIN3-209ENST00000532457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.11■■■□□ 2.732e-6■□□□□ 10.8
PACSIN3-209ENST00000532457 BCORL1Q5H9F3 1711 aa32.1■■■□□ 2.73
PACSIN3-209ENST00000532457 MLECQ14165 292 aa32.1■■■□□ 2.73
PACSIN3-209ENST00000532457 KDM5DQ9BY66 1539 aa32.08■■■□□ 2.73
PACSIN3-209ENST00000532457 GGT6Q6P531 493 aa32.08■■■□□ 2.73
PACSIN3-209ENST00000532457 UNC13BO14795 1591 aa32.07■■■□□ 2.72
PACSIN3-209ENST00000532457 NEUROD1Q13562 356 aa32.05■■■□□ 2.72
PACSIN3-209ENST00000532457 PKD2Q13563 968 aa32.05■■■□□ 2.72
PACSIN3-209ENST00000532457 PPP6R1Q9UPN7 881 aa32.05■■■□□ 2.72
PACSIN3-209ENST00000532457 RNF17Q9BXT8 1623 aaKnown RBP32.01■■■□□ 2.72
PACSIN3-209ENST00000532457 ESF1Q9H501 851 aaKnown RBP32.01■■■□□ 2.72
PACSIN3-209ENST00000532457 FAM135AQ9P2D6 1515 aa32.01■■■□□ 2.71
PACSIN3-209ENST00000532457 ANKRD30BQ9BXX2 1392 aa32■■■□□ 2.71
PACSIN3-209ENST00000532457 DEPDC5O75140 1603 aa31.97■■■□□ 2.71
PACSIN3-209ENST00000532457 KANK1Q14678 1352 aa31.96■■■□□ 2.71
PACSIN3-209ENST00000532457 IQGAP3Q86VI3 1631 aa31.95■■■□□ 2.7
PACSIN3-209ENST00000532457 ADAMTSL3P82987 1691 aa31.94■■■□□ 2.7
PACSIN3-209ENST00000532457 PRDM15P57071 1507 aaPredicted RBP31.94■■■□□ 2.7
PACSIN3-209ENST00000532457 WASHC2CQ9Y4E1 1318 aa31.93■■■□□ 2.7
PACSIN3-209ENST00000532457 MROH1Q8NDA8 1641 aa31.92■■■□□ 2.7
PACSIN3-209ENST00000532457 CNTLNQ9NXG0 1405 aa31.91■■■□□ 2.7
PACSIN3-209ENST00000532457 FER1L4A9Z1Z3 1794 aa31.91■■■□□ 2.7
PACSIN3-209ENST00000532457 MADDQ8WXG6 1647 aa31.89■■■□□ 2.69
PACSIN3-209ENST00000532457 VWDEQ8N2E2 1590 aa31.87■■■□□ 2.69
PACSIN3-209ENST00000532457 ZC3H13Q5T200 1668 aaKnown RBP31.86■■■□□ 2.69
PACSIN3-209ENST00000532457 KDM4FA0A1W2PPD8 638 aa31.86■■■□□ 2.69
PACSIN3-209ENST00000532457 CLTCQ00610 1675 aaKnown RBP31.82■■■□□ 2.68
PACSIN3-209ENST00000532457 ABCC3O15438 1527 aa31.82■■■□□ 2.68
PACSIN3-209ENST00000532457 RIMS1Q86UR5 1692 aaKnown RBP31.81■■■□□ 2.68
PACSIN3-209ENST00000532457 TIMELESSQ9UNS1 1208 aa31.8■■■□□ 2.68
PACSIN3-209ENST00000532457 MROH2AA6NES4 1674 aa31.8■■■□□ 2.68
PACSIN3-209ENST00000532457 PLA2R1Q13018 1463 aa31.79■■■□□ 2.68
PACSIN3-209ENST00000532457 LMTK2Q8IWU2 1503 aa31.78■■■□□ 2.68
PACSIN3-209ENST00000532457 CEP152O94986 1710 aa31.78■■■□□ 2.68
PACSIN3-209ENST00000532457 ZMYM3Q14202 1370 aa31.78■■■□□ 2.68
PACSIN3-209ENST00000532457 RPRD2Q5VT52 1461 aaKnown RBP31.77■■■□□ 2.68
PACSIN3-209ENST00000532457 E9PCH4 1651 aa31.74■■■□□ 2.67
PACSIN3-209ENST00000532457 PTPRMP28827 1452 aa31.74■■■□□ 2.67
PACSIN3-209ENST00000532457 TONSLQ96HA7 1378 aa31.73■■■□□ 2.67
PACSIN3-209ENST00000532457 TET3O43151 1660 aa31.73■■■□□ 2.67
PACSIN3-209ENST00000532457 CAMSAP1Q5T5Y3 1602 aa31.72■■■□□ 2.67
PACSIN3-209ENST00000532457 PPP1R15AO75807 674 aaPredicted RBP31.72■■■□□ 2.67
PACSIN3-209ENST00000532457 ARHGAP31Q2M1Z3 1444 aa31.7■■■□□ 2.66
PACSIN3-209ENST00000532457 L3MBTL2Q969R5 705 aa31.68■■■□□ 2.66
PACSIN3-209ENST00000532457 EFCAB6Q5THR3 1501 aa31.68■■■□□ 2.66
PACSIN3-209ENST00000532457 C3P01024 1663 aa31.68■■■□□ 2.66
PACSIN3-209ENST00000532457 CEBPAP49715 358 aaPredicted RBP31.67■■■□□ 2.66
PACSIN3-209ENST00000532457 PLPPR3Q6T4P5 718 aa31.66■■■□□ 2.66
PACSIN3-209ENST00000532457 NPATQ14207 1427 aa31.64■■■□□ 2.65
PACSIN3-209ENST00000532457 PTPRTO14522 1441 aa31.63■■■□□ 2.65
PACSIN3-209ENST00000532457 CCDC144AA2RUR9 1427 aa31.59■■■□□ 2.65
PACSIN3-209ENST00000532457 FBXO31Q5XUX0 539 aaPredicted RBP31.57■■■□□ 2.64
PACSIN3-209ENST00000532457 CFAP65Q6ZU64 1925 aaKnown RBP31.55■■■□□ 2.64
PACSIN3-209ENST00000532457 SPHKAPQ2M3C7 1700 aa31.55■■■□□ 2.64
PACSIN3-209ENST00000532457 ERVK-7P63135 1459 aa31.54■■■□□ 2.64
PACSIN3-209ENST00000532457 PREX1Q8TCU6 1659 aa31.53■■■□□ 2.64
PACSIN3-209ENST00000532457 TRPM2O94759 1503 aa31.53■■■□□ 2.64
PACSIN3-209ENST00000532457 SPATA31D1Q6ZQQ2 1576 aa31.52■■■□□ 2.64
PACSIN3-209ENST00000532457 SETD1BQ9UPS6 1966 aaKnown RBP31.52■■■□□ 2.64
PACSIN3-209ENST00000532457 TNRQ92752 1358 aa31.5■■■□□ 2.63
PACSIN3-209ENST00000532457 NOS1P29475 1434 aa31.49■■■□□ 2.63
PACSIN3-209ENST00000532457 CLTCL1P53675 1640 aa31.48■■■□□ 2.63
PACSIN3-209ENST00000532457 NBPF8Q3BBV2 869 aa31.47■■■□□ 2.63
PACSIN3-209ENST00000532457 RGL3Q3MIN7 710 aa31.47■■■□□ 2.63
PACSIN3-209ENST00000532457 AEBP2Q6ZN18 517 aaPredicted RBP31.47■■■□□ 2.63
PACSIN3-209ENST00000532457 UGGT1Q9NYU2 1555 aa31.46■■■□□ 2.63
PACSIN3-209ENST00000532457 SLC52A1Q9NWF4 448 aa31.44■■■□□ 2.62
PACSIN3-209ENST00000532457 SPATA31E1Q6ZUB1 1445 aa31.42■■■□□ 2.62
PACSIN3-209ENST00000532457 DCAF11Q8TEB1 546 aa31.41■■■□□ 2.62
PACSIN3-209ENST00000532457 NLRP1Q9C000 1473 aa31.41■■■□□ 2.62
PACSIN3-209ENST00000532457 UHRF1BP1Q6BDS2 1440 aa31.4■■■□□ 2.62
PACSIN3-209ENST00000532457 KDM2AQ9Y2K7 1162 aa31.4■■■□□ 2.62
PACSIN3-209ENST00000532457 SYNMO15061 1565 aa31.39■■■□□ 2.62
PACSIN3-209ENST00000532457 MYO3AQ8NEV4 1616 aa31.37■■■□□ 2.61
PACSIN3-209ENST00000532457 ZNF316A6NFI3 1004 aaPredicted RBP31.35■■■□□ 2.61
PACSIN3-209ENST00000532457 IDI1Q13907 227 aa31.35■■■□□ 2.61
PACSIN3-209ENST00000532457 A2ML1A8K2U0 1454 aa31.32■■■□□ 2.6
PACSIN3-209ENST00000532457 ZNF326Q5BKZ1 582 aaKnown RBP31.31■■■□□ 2.6
PACSIN3-209ENST00000532457 PIK3C2BO00750 1634 aa31.31■■■□□ 2.6
PACSIN3-209ENST00000532457 STAG3Q9UJ98 1225 aa31.31■■■□□ 2.6
PACSIN3-209ENST00000532457 CEP170BQ9Y4F5 1589 aaPredicted RBP31.3■■■□□ 2.6
PACSIN3-209ENST00000532457 ZNF142P52746 1687 aaPredicted RBP31.29■■■□□ 2.6
PACSIN3-209ENST00000532457 KIF1BO60333 1816 aa31.25■■■□□ 2.59
PACSIN3-209ENST00000532457 CHGAP10645 457 aaKnown RBP31.25■■■□□ 2.59
PACSIN3-209ENST00000532457 THEMISQ8N1K5 641 aaPredicted RBP31.25■■■□□ 2.59
PACSIN3-209ENST00000532457 LMTK3Q96Q04 1460 aa31.24■■■□□ 2.59
PACSIN3-209ENST00000532457 KDM5AP29375 1690 aaKnown RBP31.24■■■□□ 2.59
PACSIN3-209ENST00000532457 NEURL4Q96JN8 1562 aa31.24■■■□□ 2.59
PACSIN3-209ENST00000532457 ADGRB3O60242 1522 aa31.21■■■□□ 2.59
PACSIN3-209ENST00000532457 HIRIP3Q9BW71 556 aaPredicted RBP31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms