RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 CROCC2H7BZ55 1655 aa26.73■■□□□ 1.87
CTSB-223ENST00000532370 C3P01024 1663 aa26.73■■□□□ 1.87
CTSB-223ENST00000532370 ITGAEP38570 1179 aa26.71■■□□□ 1.87
CTSB-223ENST00000532370 CLTCQ00610 1675 aaKnown RBP26.7■■□□□ 1.87
CTSB-223ENST00000532370 ERBINQ96RT1 1412 aa26.67■■□□□ 1.86
CTSB-223ENST00000532370 FBXO31Q5XUX0 539 aaPredicted RBP26.67■■□□□ 1.86
CTSB-223ENST00000532370 ADGRL2O95490 1459 aa26.67■■□□□ 1.86
CTSB-223ENST00000532370 UHRF1BP1Q6BDS2 1440 aa26.66■■□□□ 1.86
CTSB-223ENST00000532370 NPATQ14207 1427 aa26.65■■□□□ 1.86
CTSB-223ENST00000532370 KDM5DQ9BY66 1539 aa26.65■■□□□ 1.86
CTSB-223ENST00000532370 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.65■■□□□ 1.86
CTSB-223ENST00000532370 MROH2AA6NES4 1674 aa26.65■■□□□ 1.86
CTSB-223ENST00000532370 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.63■■□□□ 1.855e-11■□□□□ 10.7
CTSB-223ENST00000532370 RNF17Q9BXT8 1623 aaKnown RBP26.62■■□□□ 1.85
CTSB-223ENST00000532370 EIF2AK4Q9P2K8 1649 aaKnown RBP26.61■■□□□ 1.85
CTSB-223ENST00000532370 RRBP1Q9P2E9 1410 aaKnown RBP26.61■■□□□ 1.85
CTSB-223ENST00000532370 MROH1Q8NDA8 1641 aa26.61■■□□□ 1.85
CTSB-223ENST00000532370 ABCC3O15438 1527 aa26.6■■□□□ 1.85
CTSB-223ENST00000532370 FAM135AQ9P2D6 1515 aa26.59■■□□□ 1.85
CTSB-223ENST00000532370 PREX1Q8TCU6 1659 aa26.58■■□□□ 1.85
CTSB-223ENST00000532370 ANKRD50Q9ULJ7 1429 aa26.57■■□□□ 1.84
CTSB-223ENST00000532370 PZPP20742 1482 aa26.57■■□□□ 1.84
CTSB-223ENST00000532370 ROCK1Q13464 1354 aa26.57■■□□□ 1.84
CTSB-223ENST00000532370 SETD1BQ9UPS6 1966 aaKnown RBP26.56■■□□□ 1.84
CTSB-223ENST00000532370 TNRQ92752 1358 aa26.54■■□□□ 1.84
CTSB-223ENST00000532370 PRDM15P57071 1507 aaPredicted RBP26.52■■□□□ 1.84
CTSB-223ENST00000532370 KANK1Q14678 1352 aa26.5■■□□□ 1.83
CTSB-223ENST00000532370 DEPDC5O75140 1603 aa26.47■■□□□ 1.83
CTSB-223ENST00000532370 ZC3H13Q5T200 1668 aaKnown RBP26.44■■□□□ 1.82
CTSB-223ENST00000532370 MYO3AQ8NEV4 1616 aa26.43■■□□□ 1.82
CTSB-223ENST00000532370 ARHGAP31Q2M1Z3 1444 aa26.43■■□□□ 1.82
CTSB-223ENST00000532370 ERVK-7P63135 1459 aa26.42■■□□□ 1.82
CTSB-223ENST00000532370 CEP152O94986 1710 aa26.42■■□□□ 1.82
CTSB-223ENST00000532370 VWDEQ8N2E2 1590 aa26.42■■□□□ 1.82
CTSB-223ENST00000532370 A2ML1A8K2U0 1454 aa26.42■■□□□ 1.82
CTSB-223ENST00000532370 CEP170BQ9Y4F5 1589 aaPredicted RBP26.41■■□□□ 1.82
CTSB-223ENST00000532370 NCKAP5LQ9HCH0 1330 aa26.4■■□□□ 1.82
CTSB-223ENST00000532370 CAMSAP1Q5T5Y3 1602 aa26.4■■□□□ 1.82
CTSB-223ENST00000532370 LMTK2Q8IWU2 1503 aa26.39■■□□□ 1.82
CTSB-223ENST00000532370 SPATA31D1Q6ZQQ2 1576 aa26.38■■□□□ 1.81
CTSB-223ENST00000532370 DMRT2Q9Y5R5 561 aa26.37■■□□□ 1.81
CTSB-223ENST00000532370 NLRP1Q9C000 1473 aa26.36■■□□□ 1.81
CTSB-223ENST00000532370 STRCQ7RTU9 1775 aa26.35■■□□□ 1.81
CTSB-223ENST00000532370 NUP155O75694 1391 aa26.34■■□□□ 1.81
CTSB-223ENST00000532370 NAIPQ13075 1403 aa26.34■■□□□ 1.81
CTSB-223ENST00000532370 ZNF142P52746 1687 aaPredicted RBP26.34■■□□□ 1.81
CTSB-223ENST00000532370 THEMISQ8N1K5 641 aaPredicted RBP26.32■■□□□ 1.8
CTSB-223ENST00000532370 PKD2Q13563 968 aa26.31■■□□□ 1.8
CTSB-223ENST00000532370 PLA2R1Q13018 1463 aa26.3■■□□□ 1.8
CTSB-223ENST00000532370 EFCAB6Q5THR3 1501 aa26.3■■□□□ 1.8
CTSB-223ENST00000532370 UNC13BO14795 1591 aa26.29■■□□□ 1.8
CTSB-223ENST00000532370 PTPRTO14522 1441 aa26.29■■□□□ 1.8
CTSB-223ENST00000532370 UGGT1Q9NYU2 1555 aa26.29■■□□□ 1.8
CTSB-223ENST00000532370 IDI1Q13907 227 aa26.28■■□□□ 1.8
CTSB-223ENST00000532370 HFM1A2PYH4 1435 aa26.27■■□□□ 1.8
CTSB-223ENST00000532370 NOS1P29475 1434 aa26.27■■□□□ 1.8
CTSB-223ENST00000532370 CFAP65Q6ZU64 1925 aaKnown RBP26.26■■□□□ 1.79
CTSB-223ENST00000532370 ANKLE2Q86XL3 938 aa26.24■■□□□ 1.79
CTSB-223ENST00000532370 RPRD2Q5VT52 1461 aaKnown RBP26.22■■□□□ 1.79
CTSB-223ENST00000532370 SYNMO15061 1565 aa26.2■■□□□ 1.79
CTSB-223ENST00000532370 TET3O43151 1660 aa26.2■■□□□ 1.78
CTSB-223ENST00000532370 STAG3Q9UJ98 1225 aa26.2■■□□□ 1.78
CTSB-223ENST00000532370 IQGAP3Q86VI3 1631 aa26.19■■□□□ 1.78
CTSB-223ENST00000532370 TRIM52Q96A61 297 aa26.19■■□□□ 1.78
CTSB-223ENST00000532370 SLC52A1Q9NWF4 448 aa26.19■■□□□ 1.78
CTSB-223ENST00000532370 LTKP29376 864 aa26.16■■□□□ 1.78
CTSB-223ENST00000532370 CERKQ8TCT0 537 aa26.15■■□□□ 1.78
CTSB-223ENST00000532370 ZNF335Q9H4Z2 1342 aaPredicted RBP26.14■■□□□ 1.78
CTSB-223ENST00000532370 TXNDC2Q86VQ3 553 aa26.14■■□□□ 1.78
CTSB-223ENST00000532370 GCC2Q8IWJ2 1684 aa26.13■■□□□ 1.77
CTSB-223ENST00000532370 NEURL4Q96JN8 1562 aa26.13■■□□□ 1.77
CTSB-223ENST00000532370 ILDR1Q86SU0 546 aaPredicted RBP26.13■■□□□ 1.77
CTSB-223ENST00000532370 PIK3C2BO00750 1634 aa26.13■■□□□ 1.77
CTSB-223ENST00000532370 UBR1Q8IWV7 1749 aa26.12■■□□□ 1.77
CTSB-223ENST00000532370 TMEM2Q9UHN6 1383 aa26.11■■□□□ 1.77
CTSB-223ENST00000532370 E9PCH4 1651 aa26.11■■□□□ 1.77
CTSB-223ENST00000532370 NPHP4O75161 1426 aaPredicted RBP26.11■■□□□ 1.77
CTSB-223ENST00000532370 ARHGAP23Q9P227 1491 aa26.1■■□□□ 1.77
CTSB-223ENST00000532370 CHGAP10645 457 aaKnown RBP26.08■■□□□ 1.77
CTSB-223ENST00000532370 EID1Q9Y6B2 187 aa26.08■■□□□ 1.77
CTSB-223ENST00000532370 MED14O60244 1454 aa26.08■■□□□ 1.77
CTSB-223ENST00000532370 SLIT1O75093 1534 aa26.08■■□□□ 1.77
CTSB-223ENST00000532370 SLC4A1APQ9BWU0 796 aaKnown RBP26.07■■□□□ 1.76
CTSB-223ENST00000532370 SCAF11Q99590 1463 aaKnown RBP26.06■■□□□ 1.76
CTSB-223ENST00000532370 LTBP4Q8N2S1 1624 aa26.05■■□□□ 1.76
CTSB-223ENST00000532370 ADGRB3O60242 1522 aa26.04■■□□□ 1.76
CTSB-223ENST00000532370 SETD5Q9C0A6 1442 aa26.04■■□□□ 1.76
CTSB-223ENST00000532370 FBXO41Q8TF61 875 aa26.03■■□□□ 1.76
CTSB-223ENST00000532370 POLR1AO95602 1720 aaPredicted RBP26.02■■□□□ 1.76
CTSB-223ENST00000532370 FOXD1Q16676 465 aa26.01■■□□□ 1.75
CTSB-223ENST00000532370 SENP3Q9H4L4 574 aaPredicted RBP26■■□□□ 1.75
CTSB-223ENST00000532370 NUTM2DQ5VT03 806 aaPredicted RBP25.98■■□□□ 1.75
CTSB-223ENST00000532370 MPHOSPH9Q99550 1183 aa25.98■■□□□ 1.75
CTSB-223ENST00000532370 RAB3GAP2Q9H2M9 1393 aa25.96■■□□□ 1.75
CTSB-223ENST00000532370 KDM5AP29375 1690 aaKnown RBP25.96■■□□□ 1.75
CTSB-223ENST00000532370 ZFYVE9O95405 1425 aa25.96■■□□□ 1.75
CTSB-223ENST00000532370 RIMS2Q9UQ26 1411 aa25.96■■□□□ 1.75
CTSB-223ENST00000532370 TMEM131LA2VDJ0 1609 aa25.96■■□□□ 1.75
CTSB-223ENST00000532370 IQGAP1P46940 1657 aa25.95■■□□□ 1.74
CTSB-223ENST00000532370 SLC26A8Q96RN1 970 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms