RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 EIF5BO60841 1220 aaKnown RBP14.77□□□□□ -0.04
NXF1-211ENST00000531709 ZNF608Q9ULD9 1512 aaPredicted RBP14.77□□□□□ -0.05
NXF1-211ENST00000531709 CAMSAP2Q08AD1 1489 aa14.76□□□□□ -0.05
NXF1-211ENST00000531709 GOLGA2Q08379 1002 aa14.76□□□□□ -0.05
NXF1-211ENST00000531709 C9orf84Q5VXU9 1444 aa14.76□□□□□ -0.05
NXF1-211ENST00000531709 DHX29Q7Z478 1369 aaKnown RBP14.75□□□□□ -0.05
NXF1-211ENST00000531709 KIAA0586Q9BVV6 1533 aa14.74□□□□□ -0.05
NXF1-211ENST00000531709 SAMD9Q5K651 1589 aa14.74□□□□□ -0.05
NXF1-211ENST00000531709 UPF2Q9HAU5 1272 aaKnown RBP14.72□□□□□ -0.05
NXF1-211ENST00000531709 TEX14Q8IWB6 1497 aa14.72□□□□□ -0.05
NXF1-211ENST00000531709 DENND4BO75064 1496 aaPredicted RBP14.72□□□□□ -0.05
NXF1-211ENST00000531709 NUP153P49790 1475 aaKnown RBP14.72□□□□□ -0.05
NXF1-211ENST00000531709 BACH2Q9BYV9 841 aa14.72□□□□□ -0.05
NXF1-211ENST00000531709 PTPRGP23470 1445 aa14.71□□□□□ -0.05
NXF1-211ENST00000531709 RSPH4AQ5TD94 716 aa14.71□□□□□ -0.05
NXF1-211ENST00000531709 SPATA31E1Q6ZUB1 1445 aa14.71□□□□□ -0.06
NXF1-211ENST00000531709 APAF1O14727 1248 aa14.71□□□□□ -0.06
NXF1-211ENST00000531709 C20orf194Q5TEA3 1177 aa14.7□□□□□ -0.06
NXF1-211ENST00000531709 MS4A1P11836 297 aa14.7□□□□□ -0.06
NXF1-211ENST00000531709 MRC2Q9UBG0 1479 aa14.7□□□□□ -0.06
NXF1-211ENST00000531709 GPATCH8Q9UKJ3 1502 aaKnown RBP14.69□□□□□ -0.06
NXF1-211ENST00000531709 ARHGEF11O15085 1522 aa14.69□□□□□ -0.06
NXF1-211ENST00000531709 KDM5BQ9UGL1 1544 aa14.69□□□□□ -0.06
NXF1-211ENST00000531709 PZPP20742 1482 aa14.68□□□□□ -0.06
NXF1-211ENST00000531709 WDR62O43379 1518 aa14.67□□□□□ -0.06
NXF1-211ENST00000531709 EFCAB2Q5VUJ9 269 aa14.67□□□□□ -0.06
NXF1-211ENST00000531709 RRP7AQ9Y3A4 280 aaKnown RBP14.67□□□□□ -0.06
NXF1-211ENST00000531709 ABCA5Q8WWZ7 1642 aa14.67□□□□□ -0.06
NXF1-211ENST00000531709 CENPQQ7L2Z9 268 aaPredicted RBP14.66□□□□□ -0.06
NXF1-211ENST00000531709 IFT140Q96RY7 1462 aa14.66□□□□□ -0.06
NXF1-211ENST00000531709 IL27Q8NEV9 243 aa14.66□□□□□ -0.06
NXF1-211ENST00000531709 SLKQ9H2G2 1235 aaPredicted RBP14.65□□□□□ -0.06
NXF1-211ENST00000531709 SPRYD3Q8NCJ5 442 aa14.65□□□□□ -0.06
NXF1-211ENST00000531709 CLUAP1Q96AJ1 413 aa14.65□□□□□ -0.06
NXF1-211ENST00000531709 KIF3BO15066 747 aa14.65□□□□□ -0.06
NXF1-211ENST00000531709 PPP2R1AP30153 589 aa14.64□□□□□ -0.07
NXF1-211ENST00000531709 FAM161AQ3B820 660 aa14.64□□□□□ -0.07
NXF1-211ENST00000531709 MORC1Q86VD1 984 aa14.64□□□□□ -0.07
NXF1-211ENST00000531709 BCL2L13Q9BXK5 485 aa14.64□□□□□ -0.07
NXF1-211ENST00000531709 SAFB2Q14151 953 aaKnown RBP eCLIP14.64□□□□□ -0.07
NXF1-211ENST00000531709 GRIN2AQ12879 1464 aa14.64□□□□□ -0.07
NXF1-211ENST00000531709 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.64□□□□□ -0.07
NXF1-211ENST00000531709 GCC2Q8IWJ2 1684 aa14.63□□□□□ -0.07
NXF1-211ENST00000531709 BECN1Q14457 450 aa14.63□□□□□ -0.07
NXF1-211ENST00000531709 COG6Q9Y2V7 657 aa14.63□□□□□ -0.07
NXF1-211ENST00000531709 USP35Q9P2H5 1018 aa14.62□□□□□ -0.07
NXF1-211ENST00000531709 SPAG9O60271 1321 aaKnown RBP14.62□□□□□ -0.07
NXF1-211ENST00000531709 RNF123Q5XPI4 1314 aa14.61□□□□□ -0.07
NXF1-211ENST00000531709 BCAR3O75815 825 aa14.61□□□□□ -0.07
NXF1-211ENST00000531709 FTSJ3Q8IY81 847 aaKnown RBP14.6□□□□□ -0.07
NXF1-211ENST00000531709 DISP3Q9P2K9 1392 aa14.6□□□□□ -0.07
NXF1-211ENST00000531709 NFKBIBQ15653 356 aa14.6□□□□□ -0.07
NXF1-211ENST00000531709 AFAP1Q8N556 730 aa14.6□□□□□ -0.07
NXF1-211ENST00000531709 DNMT1P26358 1616 aaKnown RBP14.6□□□□□ -0.07
NXF1-211ENST00000531709 MAGI1Q96QZ7 1491 aaPredicted RBP14.6□□□□□ -0.07
NXF1-211ENST00000531709 NUTM2DQ5VT03 806 aaPredicted RBP14.6□□□□□ -0.07
NXF1-211ENST00000531709 U2SURPO15042 1029 aaKnown RBP14.59□□□□□ -0.07
NXF1-211ENST00000531709 GSE1Q14687 1217 aa14.59□□□□□ -0.07
NXF1-211ENST00000531709 TRAK1Q9UPV9 953 aa14.59□□□□□ -0.07
NXF1-211ENST00000531709 DISP1Q96F81 1524 aa14.59□□□□□ -0.07
NXF1-211ENST00000531709 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
NXF1-211ENST00000531709 CFAP53Q96M91 514 aa14.59□□□□□ -0.07
NXF1-211ENST00000531709 ERBINQ96RT1 1412 aa14.59□□□□□ -0.07
NXF1-211ENST00000531709 CENPJQ9HC77 1338 aaPredicted RBP14.58□□□□□ -0.07
NXF1-211ENST00000531709 WASHC2CQ9Y4E1 1318 aa14.58□□□□□ -0.07
NXF1-211ENST00000531709 LRRIQ1Q96JM4 1722 aa14.58□□□□□ -0.08
NXF1-211ENST00000531709 KIF21AQ7Z4S6 1674 aa14.58□□□□□ -0.08
NXF1-211ENST00000531709 RALGAPBQ86X10 1494 aa14.58□□□□□ -0.08
NXF1-211ENST00000531709 PER1O15534 1290 aaPredicted RBP14.58□□□□□ -0.08
NXF1-211ENST00000531709 GGT6Q6P531 493 aa14.58□□□□□ -0.08
NXF1-211ENST00000531709 PANK1Q8TE04 598 aa14.57□□□□□ -0.08
NXF1-211ENST00000531709 ADAMTS12P58397 1594 aa14.57□□□□□ -0.08
NXF1-211ENST00000531709 CFAP70Q5T0N1 1121 aa14.56□□□□□ -0.08
NXF1-211ENST00000531709 HSP90AA1P07900 732 aaKnown RBP14.56□□□□□ -0.08
NXF1-211ENST00000531709 U2AF1L5P0DN76 240 aaPredicted RBP14.56□□□□□ -0.08
NXF1-211ENST00000531709 U2AF1Q01081 240 aaKnown RBP eCLIP14.56□□□□□ -0.085e-8■■■□□ 16.5
NXF1-211ENST00000531709 KIAA0556O60303 1618 aa14.56□□□□□ -0.08
NXF1-211ENST00000531709 LRPPRCP42704 1394 aaKnown RBP14.55□□□□□ -0.08
NXF1-211ENST00000531709 KANK1Q14678 1352 aa14.55□□□□□ -0.08
NXF1-211ENST00000531709 SYNJ2O15056 1496 aa14.55□□□□□ -0.08
NXF1-211ENST00000531709 E9PSI1 815 aa14.55□□□□□ -0.08
NXF1-211ENST00000531709 ARHGAP5Q13017 1502 aa14.55□□□□□ -0.08
NXF1-211ENST00000531709 TESK2Q96S53 571 aa14.55□□□□□ -0.08
NXF1-211ENST00000531709 BRPF3Q9ULD4 1205 aa14.54□□□□□ -0.08
NXF1-211ENST00000531709 PARD3Q8TEW0 1356 aa14.54□□□□□ -0.08
NXF1-211ENST00000531709 FRAT2O75474 233 aaPredicted RBP14.53□□□□□ -0.08
NXF1-211ENST00000531709 DUSP27Q5VZP5 1158 aa14.53□□□□□ -0.08
NXF1-211ENST00000531709 NPM1P06748 294 aaKnown RBP eCLIP14.52□□□□□ -0.08
NXF1-211ENST00000531709 STK26Q9P289 416 aa14.52□□□□□ -0.08
NXF1-211ENST00000531709 ATP10BO94823 1461 aa14.52□□□□□ -0.08
NXF1-211ENST00000531709 EIF3AQ14152 1382 aaKnown RBP14.52□□□□□ -0.09
NXF1-211ENST00000531709 ANO8Q9HCE9 1232 aaPredicted RBP14.52□□□□□ -0.09
NXF1-211ENST00000531709 TARBP1Q13395 1621 aaKnown RBP14.52□□□□□ -0.09
NXF1-211ENST00000531709 GZF1Q9H116 711 aaPredicted RBP14.51□□□□□ -0.09
NXF1-211ENST00000531709 STAG3Q9UJ98 1225 aa14.51□□□□□ -0.09
NXF1-211ENST00000531709 CCDC141Q6ZP82 1450 aa14.51□□□□□ -0.09
NXF1-211ENST00000531709 KIF14Q15058 1648 aa14.5□□□□□ -0.09
NXF1-211ENST00000531709 PRAG1Q86YV5 1406 aa14.5□□□□□ -0.09
NXF1-211ENST00000531709 PLEKHH2Q8IVE3 1493 aa14.5□□□□□ -0.09
NXF1-211ENST00000531709 SLFN5Q08AF3 891 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms