RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 HRCP23327 699 aa26.17■■□□□ 1.78
CTSB-222ENST00000531551 AGLP35573 1532 aa26.17■■□□□ 1.78
CTSB-222ENST00000531551 NUP155O75694 1391 aa26.17■■□□□ 1.78
CTSB-222ENST00000531551 KANK1Q14678 1352 aa26.12■■□□□ 1.77
CTSB-222ENST00000531551 ACIN1Q9UKV3 1341 aaKnown RBP26.11■■□□□ 1.77
CTSB-222ENST00000531551 WASHC2CQ9Y4E1 1318 aa26.1■■□□□ 1.77
CTSB-222ENST00000531551 BCORL1Q5H9F3 1711 aa26.09■■□□□ 1.77
CTSB-222ENST00000531551 ESF1Q9H501 851 aaKnown RBP26.08■■□□□ 1.77
CTSB-222ENST00000531551 UNC13BO14795 1591 aa26.08■■□□□ 1.77
CTSB-222ENST00000531551 RNF17Q9BXT8 1623 aaKnown RBP26.08■■□□□ 1.77
CTSB-222ENST00000531551 SLC4A1APQ9BWU0 796 aaKnown RBP26.08■■□□□ 1.77
CTSB-222ENST00000531551 DEPDC5O75140 1603 aa26.07■■□□□ 1.76
CTSB-222ENST00000531551 MROH1Q8NDA8 1641 aa26.06■■□□□ 1.76
CTSB-222ENST00000531551 PRDM15P57071 1507 aaPredicted RBP26.06■■□□□ 1.76
CTSB-222ENST00000531551 MPHOSPH9Q99550 1183 aa26.05■■□□□ 1.76
CTSB-222ENST00000531551 PPP6R1Q9UPN7 881 aa26.02■■□□□ 1.76
CTSB-222ENST00000531551 FAM135AQ9P2D6 1515 aa26.02■■□□□ 1.76
CTSB-222ENST00000531551 PZPP20742 1482 aa26.01■■□□□ 1.75
CTSB-222ENST00000531551 KDM5DQ9BY66 1539 aa26■■□□□ 1.75
CTSB-222ENST00000531551 PKD2Q13563 968 aa25.98■■□□□ 1.75
CTSB-222ENST00000531551 IQGAP3Q86VI3 1631 aa25.98■■□□□ 1.75
CTSB-222ENST00000531551 VWDEQ8N2E2 1590 aa25.98■■□□□ 1.75
CTSB-222ENST00000531551 FOXD1Q16676 465 aa25.98■■□□□ 1.75
CTSB-222ENST00000531551 ABCC3O15438 1527 aa25.98■■□□□ 1.75
CTSB-222ENST00000531551 DHX57Q6P158 1386 aaKnown RBP25.97■■□□□ 1.75
CTSB-222ENST00000531551 CEP152O94986 1710 aa25.94■■□□□ 1.74
CTSB-222ENST00000531551 PLPPR3Q6T4P5 718 aa25.94■■□□□ 1.74
CTSB-222ENST00000531551 CCER1Q8TC90 406 aaPredicted RBP25.93■■□□□ 1.74
CTSB-222ENST00000531551 LMTK2Q8IWU2 1503 aa25.92■■□□□ 1.74
CTSB-222ENST00000531551 CLTCQ00610 1675 aaKnown RBP25.92■■□□□ 1.74
CTSB-222ENST00000531551 ZC3H13Q5T200 1668 aaKnown RBP25.9■■□□□ 1.74
CTSB-222ENST00000531551 CNTLNQ9NXG0 1405 aa25.9■■□□□ 1.74
CTSB-222ENST00000531551 ZMYM3Q14202 1370 aa25.89■■□□□ 1.74
CTSB-222ENST00000531551 MADDQ8WXG6 1647 aa25.88■■□□□ 1.73
CTSB-222ENST00000531551 TET3O43151 1660 aa25.88■■□□□ 1.73
CTSB-222ENST00000531551 EFCAB6Q5THR3 1501 aa25.87■■□□□ 1.73
CTSB-222ENST00000531551 FER1L4A9Z1Z3 1794 aa25.87■■□□□ 1.73
CTSB-222ENST00000531551 CAMSAP1Q5T5Y3 1602 aa25.87■■□□□ 1.73
CTSB-222ENST00000531551 CEBPAP49715 358 aaPredicted RBP25.87■■□□□ 1.73
CTSB-222ENST00000531551 NPATQ14207 1427 aa25.86■■□□□ 1.73
CTSB-222ENST00000531551 ADAMTSL3P82987 1691 aa25.85■■□□□ 1.73
CTSB-222ENST00000531551 FBXO31Q5XUX0 539 aaPredicted RBP25.84■■□□□ 1.73
CTSB-222ENST00000531551 ARHGAP31Q2M1Z3 1444 aa25.83■■□□□ 1.73
CTSB-222ENST00000531551 E9PCH4 1651 aa25.82■■□□□ 1.72
CTSB-222ENST00000531551 RIMS1Q86UR5 1692 aaKnown RBP25.82■■□□□ 1.72
CTSB-222ENST00000531551 KDM4FA0A1W2PPD8 638 aa25.81■■□□□ 1.72
CTSB-222ENST00000531551 RPRD2Q5VT52 1461 aaKnown RBP25.79■■□□□ 1.72
CTSB-222ENST00000531551 MROH2AA6NES4 1674 aa25.77■■□□□ 1.72
CTSB-222ENST00000531551 ANKRD30BQ9BXX2 1392 aa25.75■■□□□ 1.71
CTSB-222ENST00000531551 PTPRMP28827 1452 aa25.73■■□□□ 1.71
CTSB-222ENST00000531551 ERVK-7P63135 1459 aa25.73■■□□□ 1.71
CTSB-222ENST00000531551 SIN3AQ96ST3 1273 aa25.73■■□□□ 1.71
CTSB-222ENST00000531551 PLA2R1Q13018 1463 aa25.73■■□□□ 1.71
CTSB-222ENST00000531551 CFAP65Q6ZU64 1925 aaKnown RBP25.73■■□□□ 1.71
CTSB-222ENST00000531551 C3P01024 1663 aa25.73■■□□□ 1.71
CTSB-222ENST00000531551 NEUROD1Q13562 356 aa25.72■■□□□ 1.71
CTSB-222ENST00000531551 PTPRTO14522 1441 aa25.72■■□□□ 1.71
CTSB-222ENST00000531551 NOS1P29475 1434 aa25.71■■□□□ 1.71
CTSB-222ENST00000531551 PREX1Q8TCU6 1659 aa25.69■■□□□ 1.7
CTSB-222ENST00000531551 CCDC144AA2RUR9 1427 aa25.69■■□□□ 1.7
CTSB-222ENST00000531551 TNRQ92752 1358 aa25.68■■□□□ 1.7
CTSB-222ENST00000531551 SPHKAPQ2M3C7 1700 aa25.68■■□□□ 1.7
CTSB-222ENST00000531551 CLSPNQ9HAW4 1339 aa25.68■■□□□ 1.7
CTSB-222ENST00000531551 TRPM2O94759 1503 aa25.67■■□□□ 1.7
CTSB-222ENST00000531551 SPATA31D1Q6ZQQ2 1576 aa25.67■■□□□ 1.7
CTSB-222ENST00000531551 UGGT1Q9NYU2 1555 aa25.66■■□□□ 1.7
CTSB-222ENST00000531551 CHGAP10645 457 aaKnown RBP25.66■■□□□ 1.7
CTSB-222ENST00000531551 IDI1Q13907 227 aa25.65■■□□□ 1.7
CTSB-222ENST00000531551 SLC52A1Q9NWF4 448 aa25.65■■□□□ 1.7
CTSB-222ENST00000531551 SYNMO15061 1565 aa25.65■■□□□ 1.7
CTSB-222ENST00000531551 STAG3Q9UJ98 1225 aa25.62■■□□□ 1.69
CTSB-222ENST00000531551 CLTCL1P53675 1640 aa25.6■■□□□ 1.69
CTSB-222ENST00000531551 RGL3Q3MIN7 710 aa25.58■■□□□ 1.69
CTSB-222ENST00000531551 ZNF326Q5BKZ1 582 aaKnown RBP25.54■■□□□ 1.68
CTSB-222ENST00000531551 NLRP1Q9C000 1473 aa25.53■■□□□ 1.68
CTSB-222ENST00000531551 PIK3C2BO00750 1634 aa25.53■■□□□ 1.68
CTSB-222ENST00000531551 TONSLQ96HA7 1378 aa25.52■■□□□ 1.68
CTSB-222ENST00000531551 UHRF1BP1Q6BDS2 1440 aa25.49■■□□□ 1.67
CTSB-222ENST00000531551 MYO3AQ8NEV4 1616 aa25.49■■□□□ 1.67
CTSB-222ENST00000531551 SPATA31E1Q6ZUB1 1445 aa25.47■■□□□ 1.67
CTSB-222ENST00000531551 L3MBTL2Q969R5 705 aa25.46■■□□□ 1.67
CTSB-222ENST00000531551 KIF1BO60333 1816 aa25.46■■□□□ 1.67
CTSB-222ENST00000531551 A2ML1A8K2U0 1454 aa25.46■■□□□ 1.67
CTSB-222ENST00000531551 ADGRB3O60242 1522 aa25.45■■□□□ 1.67
CTSB-222ENST00000531551 DCAF11Q8TEB1 546 aa25.44■■□□□ 1.66
CTSB-222ENST00000531551 KDM2AQ9Y2K7 1162 aa25.44■■□□□ 1.66
CTSB-222ENST00000531551 CEP170BQ9Y4F5 1589 aaPredicted RBP25.44■■□□□ 1.66
CTSB-222ENST00000531551 TMEM131LA2VDJ0 1609 aa25.43■■□□□ 1.66
CTSB-222ENST00000531551 THEMISQ8N1K5 641 aaPredicted RBP25.43■■□□□ 1.66
CTSB-222ENST00000531551 SETD1BQ9UPS6 1966 aaKnown RBP25.43■■□□□ 1.66
CTSB-222ENST00000531551 NUTM2DQ5VT03 806 aaPredicted RBP25.43■■□□□ 1.66
CTSB-222ENST00000531551 TIMELESSQ9UNS1 1208 aa25.39■■□□□ 1.66
CTSB-222ENST00000531551 UBR1Q8IWV7 1749 aa25.39■■□□□ 1.65
CTSB-222ENST00000531551 RPGRIP1LQ68CZ1 1315 aa25.38■■□□□ 1.65
CTSB-222ENST00000531551 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
CTSB-222ENST00000531551 NEURL4Q96JN8 1562 aa25.36■■□□□ 1.65
CTSB-222ENST00000531551 MYO5BQ9ULV0 1848 aa25.35■■□□□ 1.65
CTSB-222ENST00000531551 TMEM2Q9UHN6 1383 aa25.35■■□□□ 1.65
CTSB-222ENST00000531551 PPP1R15AO75807 674 aaPredicted RBP25.35■■□□□ 1.65
CTSB-222ENST00000531551 ZNF142P52746 1687 aaPredicted RBP25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms