RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 SETD5Q9C0A6 1442 aa25.39■■□□□ 1.66
SF3B2-211ENST00000531041 FER1L4A9Z1Z3 1794 aa25.39■■□□□ 1.66
SF3B2-211ENST00000531041 PRDM15P57071 1507 aaPredicted RBP25.38■■□□□ 1.65
SF3B2-211ENST00000531041 MLECQ14165 292 aa25.37■■□□□ 1.65
SF3B2-211ENST00000531041 GGT6Q6P531 493 aa25.37■■□□□ 1.65
SF3B2-211ENST00000531041 FAM135AQ9P2D6 1515 aa25.35■■□□□ 1.65
SF3B2-211ENST00000531041 ZC3H13Q5T200 1668 aaKnown RBP25.35■■□□□ 1.65
SF3B2-211ENST00000531041 PPP6R1Q9UPN7 881 aa25.35■■□□□ 1.65
SF3B2-211ENST00000531041 MADDQ8WXG6 1647 aa25.34■■□□□ 1.65
SF3B2-211ENST00000531041 CEP152O94986 1710 aa25.34■■□□□ 1.65
SF3B2-211ENST00000531041 CLTCQ00610 1675 aaKnown RBP25.32■■□□□ 1.64
SF3B2-211ENST00000531041 VWDEQ8N2E2 1590 aa25.32■■□□□ 1.64
SF3B2-211ENST00000531041 KDM5DQ9BY66 1539 aa25.31■■□□□ 1.64
SF3B2-211ENST00000531041 MROH2AA6NES4 1674 aa25.31■■□□□ 1.64
SF3B2-211ENST00000531041 RAB3GAP2Q9H2M9 1393 aa25.3■■□□□ 1.64
SF3B2-211ENST00000531041 IQGAP3Q86VI3 1631 aa25.3■■□□□ 1.64
SF3B2-211ENST00000531041 RIMS1Q86UR5 1692 aaKnown RBP25.29■■□□□ 1.64
SF3B2-211ENST00000531041 KANK1Q14678 1352 aa25.29■■□□□ 1.64
SF3B2-211ENST00000531041 ACIN1Q9UKV3 1341 aaKnown RBP25.29■■□□□ 1.64
SF3B2-211ENST00000531041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.28■■□□□ 1.642e-8■□□□□ 10.1
SF3B2-211ENST00000531041 ABCC3O15438 1527 aa25.27■■□□□ 1.64
SF3B2-211ENST00000531041 HRCP23327 699 aa25.27■■□□□ 1.64
SF3B2-211ENST00000531041 PCGF6Q9BYE7 350 aa25.27■■□□□ 1.64
SF3B2-211ENST00000531041 CNTLNQ9NXG0 1405 aa25.27■■□□□ 1.64
SF3B2-211ENST00000531041 WASHC2CQ9Y4E1 1318 aa25.25■■□□□ 1.63
SF3B2-211ENST00000531041 ESF1Q9H501 851 aaKnown RBP25.25■■□□□ 1.63
SF3B2-211ENST00000531041 LMTK2Q8IWU2 1503 aa25.25■■□□□ 1.63
SF3B2-211ENST00000531041 CAMSAP1Q5T5Y3 1602 aa25.24■■□□□ 1.63
SF3B2-211ENST00000531041 TET3O43151 1660 aa25.23■■□□□ 1.63
SF3B2-211ENST00000531041 KDM4FA0A1W2PPD8 638 aa25.23■■□□□ 1.63
SF3B2-211ENST00000531041 NUP155O75694 1391 aa25.23■■□□□ 1.63
SF3B2-211ENST00000531041 C3P01024 1663 aa25.23■■□□□ 1.63
SF3B2-211ENST00000531041 CFAP65Q6ZU64 1925 aaKnown RBP25.2■■□□□ 1.62
SF3B2-211ENST00000531041 TRIM52Q96A61 297 aa25.2■■□□□ 1.62
SF3B2-211ENST00000531041 EFCAB6Q5THR3 1501 aa25.17■■□□□ 1.62
SF3B2-211ENST00000531041 PZPP20742 1482 aa25.17■■□□□ 1.62
SF3B2-211ENST00000531041 ZMYM3Q14202 1370 aa25.16■■□□□ 1.62
SF3B2-211ENST00000531041 PTPRMP28827 1452 aa25.16■■□□□ 1.62
SF3B2-211ENST00000531041 E9PCH4 1651 aa25.16■■□□□ 1.62
SF3B2-211ENST00000531041 ARHGAP31Q2M1Z3 1444 aa25.15■■□□□ 1.62
SF3B2-211ENST00000531041 RPRD2Q5VT52 1461 aaKnown RBP25.11■■□□□ 1.61
SF3B2-211ENST00000531041 PREX1Q8TCU6 1659 aa25.1■■□□□ 1.61
SF3B2-211ENST00000531041 NPATQ14207 1427 aa25.1■■□□□ 1.61
SF3B2-211ENST00000531041 SETD1BQ9UPS6 1966 aaKnown RBP25.1■■□□□ 1.61
SF3B2-211ENST00000531041 SLC4A1APQ9BWU0 796 aaKnown RBP25.09■■□□□ 1.61
SF3B2-211ENST00000531041 MPHOSPH9Q99550 1183 aa25.07■■□□□ 1.6
SF3B2-211ENST00000531041 CEBPAP49715 358 aaPredicted RBP25.06■■□□□ 1.6
SF3B2-211ENST00000531041 SPHKAPQ2M3C7 1700 aa25.05■■□□□ 1.6
SF3B2-211ENST00000531041 SPATA31D1Q6ZQQ2 1576 aa25.05■■□□□ 1.6
SF3B2-211ENST00000531041 ERVK-7P63135 1459 aa25.03■■□□□ 1.6
SF3B2-211ENST00000531041 PKD2Q13563 968 aa25.03■■□□□ 1.6
SF3B2-211ENST00000531041 FBXO31Q5XUX0 539 aaPredicted RBP25.01■■□□□ 1.59
SF3B2-211ENST00000531041 PLPPR3Q6T4P5 718 aa25■■□□□ 1.59
SF3B2-211ENST00000531041 NOS1P29475 1434 aa24.99■■□□□ 1.59
SF3B2-211ENST00000531041 SYNMO15061 1565 aa24.98■■□□□ 1.59
SF3B2-211ENST00000531041 PTPRTO14522 1441 aa24.96■■□□□ 1.59
SF3B2-211ENST00000531041 TNRQ92752 1358 aa24.95■■□□□ 1.58
SF3B2-211ENST00000531041 MYO3AQ8NEV4 1616 aa24.94■■□□□ 1.58
SF3B2-211ENST00000531041 PIK3C2BO00750 1634 aa24.94■■□□□ 1.58
SF3B2-211ENST00000531041 TRPM2O94759 1503 aa24.93■■□□□ 1.58
SF3B2-211ENST00000531041 FOXD1Q16676 465 aa24.93■■□□□ 1.58
SF3B2-211ENST00000531041 DHX57Q6P158 1386 aaKnown RBP24.92■■□□□ 1.58
SF3B2-211ENST00000531041 PLA2R1Q13018 1463 aa24.91■■□□□ 1.58
SF3B2-211ENST00000531041 ZNF142P52746 1687 aaPredicted RBP24.9■■□□□ 1.58
SF3B2-211ENST00000531041 NLRP1Q9C000 1473 aa24.89■■□□□ 1.57
SF3B2-211ENST00000531041 CLTCL1P53675 1640 aa24.87■■□□□ 1.57
SF3B2-211ENST00000531041 KDM5AP29375 1690 aaKnown RBP24.87■■□□□ 1.57
SF3B2-211ENST00000531041 KIF1BO60333 1816 aa24.87■■□□□ 1.57
SF3B2-211ENST00000531041 UGGT1Q9NYU2 1555 aa24.87■■□□□ 1.57
SF3B2-211ENST00000531041 SLC52A1Q9NWF4 448 aa24.86■■□□□ 1.57
SF3B2-211ENST00000531041 ANKRD30BQ9BXX2 1392 aa24.86■■□□□ 1.57
SF3B2-211ENST00000531041 CEP170BQ9Y4F5 1589 aaPredicted RBP24.85■■□□□ 1.57
SF3B2-211ENST00000531041 UHRF1BP1Q6BDS2 1440 aa24.85■■□□□ 1.57
SF3B2-211ENST00000531041 MYO5BQ9ULV0 1848 aa24.85■■□□□ 1.57
SF3B2-211ENST00000531041 UBR1Q8IWV7 1749 aa24.84■■□□□ 1.57
SF3B2-211ENST00000531041 IDI1Q13907 227 aa24.83■■□□□ 1.57
SF3B2-211ENST00000531041 A2ML1A8K2U0 1454 aa24.83■■□□□ 1.56
SF3B2-211ENST00000531041 TMEM131LA2VDJ0 1609 aa24.8■■□□□ 1.56
SF3B2-211ENST00000531041 CCDC144AA2RUR9 1427 aa24.8■■□□□ 1.56
SF3B2-211ENST00000531041 AEBP2Q6ZN18 517 aaPredicted RBP24.78■■□□□ 1.56
SF3B2-211ENST00000531041 ADGRB3O60242 1522 aa24.78■■□□□ 1.56
SF3B2-211ENST00000531041 LMTK3Q96Q04 1460 aa24.78■■□□□ 1.56
SF3B2-211ENST00000531041 NEURL4Q96JN8 1562 aa24.74■■□□□ 1.55
SF3B2-211ENST00000531041 STAG3Q9UJ98 1225 aa24.71■■□□□ 1.55
SF3B2-211ENST00000531041 THEMISQ8N1K5 641 aaPredicted RBP24.7■■□□□ 1.55
SF3B2-211ENST00000531041 CLSPNQ9HAW4 1339 aa24.7■■□□□ 1.54
SF3B2-211ENST00000531041 SPATA31E1Q6ZUB1 1445 aa24.68■■□□□ 1.54
SF3B2-211ENST00000531041 CHGAP10645 457 aaKnown RBP24.68■■□□□ 1.54
SF3B2-211ENST00000531041 SLIT1O75093 1534 aa24.67■■□□□ 1.54
SF3B2-211ENST00000531041 CCER1Q8TC90 406 aaPredicted RBP24.67■■□□□ 1.54
SF3B2-211ENST00000531041 POLR1AO95602 1720 aaPredicted RBP24.65■■□□□ 1.54
SF3B2-211ENST00000531041 IFT172Q9UG01 1749 aa24.65■■□□□ 1.54
SF3B2-211ENST00000531041 ARHGAP23Q9P227 1491 aa24.65■■□□□ 1.54
SF3B2-211ENST00000531041 PPLO60437 1756 aa24.65■■□□□ 1.54
SF3B2-211ENST00000531041 SIN3AQ96ST3 1273 aa24.64■■□□□ 1.54
SF3B2-211ENST00000531041 TMEM2Q9UHN6 1383 aa24.63■■□□□ 1.53
SF3B2-211ENST00000531041 HSPA2P54652 639 aa24.61■■□□□ 1.53
SF3B2-211ENST00000531041 STRCQ7RTU9 1775 aa24.61■■□□□ 1.53
SF3B2-211ENST00000531041 NEXMIFQ5QGS0 1516 aa24.6■■□□□ 1.53
SF3B2-211ENST00000531041 ZFYVE9O95405 1425 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms