RNA–Protein interactions for RNA: ENST00000531010.1

CHID1-218, Transcript of chitinase domain containing 1, humanhuman

TSL 2

Gene CHID1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-218ENST00000531010 UNC13BO14795 1591 aa29.39■■■□□ 2.3
CHID1-218ENST00000531010 MADDQ8WXG6 1647 aa29.38■■■□□ 2.29
CHID1-218ENST00000531010 FER1L4A9Z1Z3 1794 aa29.38■■■□□ 2.29
CHID1-218ENST00000531010 PRDM15P57071 1507 aaPredicted RBP29.37■■■□□ 2.29
CHID1-218ENST00000531010 CEP152O94986 1710 aa29.37■■■□□ 2.29
CHID1-218ENST00000531010 SETD5Q9C0A6 1442 aa29.36■■■□□ 2.29
CHID1-218ENST00000531010 GGT6Q6P531 493 aa29.35■■■□□ 2.29
CHID1-218ENST00000531010 CLTCQ00610 1675 aaKnown RBP29.34■■■□□ 2.29
CHID1-218ENST00000531010 RIMS1Q86UR5 1692 aaKnown RBP29.32■■■□□ 2.28
CHID1-218ENST00000531010 VWDEQ8N2E2 1590 aa29.32■■■□□ 2.28
CHID1-218ENST00000531010 RAB3GAP2Q9H2M9 1393 aa29.31■■■□□ 2.28
CHID1-218ENST00000531010 PCGF6Q9BYE7 350 aa29.28■■■□□ 2.28
CHID1-218ENST00000531010 ABCC3O15438 1527 aa29.28■■■□□ 2.28
CHID1-218ENST00000531010 KDM4FA0A1W2PPD8 638 aa29.27■■■□□ 2.28
CHID1-218ENST00000531010 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.27■■■□□ 2.28
CHID1-218ENST00000531010 IQGAP3Q86VI3 1631 aa29.26■■■□□ 2.27
CHID1-218ENST00000531010 KDM5DQ9BY66 1539 aa29.25■■■□□ 2.27
CHID1-218ENST00000531010 ZC3H13Q5T200 1668 aaKnown RBP29.25■■■□□ 2.27
CHID1-218ENST00000531010 CAMSAP1Q5T5Y3 1602 aa29.23■■■□□ 2.27
CHID1-218ENST00000531010 MROH2AA6NES4 1674 aa29.21■■■□□ 2.27
CHID1-218ENST00000531010 C3P01024 1663 aa29.2■■■□□ 2.26
CHID1-218ENST00000531010 FAM135AQ9P2D6 1515 aa29.2■■■□□ 2.26
CHID1-218ENST00000531010 PZPP20742 1482 aa29.19■■■□□ 2.26
CHID1-218ENST00000531010 LMTK2Q8IWU2 1503 aa29.19■■■□□ 2.26
CHID1-218ENST00000531010 NUP155O75694 1391 aa29.18■■■□□ 2.26
CHID1-218ENST00000531010 TET3O43151 1660 aa29.17■■■□□ 2.26
CHID1-218ENST00000531010 WASHC2CQ9Y4E1 1318 aa29.15■■■□□ 2.26
CHID1-218ENST00000531010 E9PCH4 1651 aa29.14■■■□□ 2.26
CHID1-218ENST00000531010 EFCAB6Q5THR3 1501 aa29.14■■■□□ 2.25
CHID1-218ENST00000531010 CFAP65Q6ZU64 1925 aaKnown RBP29.14■■■□□ 2.25
CHID1-218ENST00000531010 KANK1Q14678 1352 aa29.13■■■□□ 2.25
CHID1-218ENST00000531010 TRIM52Q96A61 297 aa29.13■■■□□ 2.25
CHID1-218ENST00000531010 CNTLNQ9NXG0 1405 aa29.12■■■□□ 2.25
CHID1-218ENST00000531010 PTPRMP28827 1452 aa29.12■■■□□ 2.25
CHID1-218ENST00000531010 PPP6R1Q9UPN7 881 aa29.12■■■□□ 2.25
CHID1-218ENST00000531010 CEBPAP49715 358 aaPredicted RBP29.1■■■□□ 2.25
CHID1-218ENST00000531010 ZMYM3Q14202 1370 aa29.09■■■□□ 2.25
CHID1-218ENST00000531010 NPATQ14207 1427 aa29.07■■■□□ 2.24
CHID1-218ENST00000531010 PLPPR3Q6T4P5 718 aa29.06■■■□□ 2.24
CHID1-218ENST00000531010 ESF1Q9H501 851 aaKnown RBP29.06■■■□□ 2.24
CHID1-218ENST00000531010 PREX1Q8TCU6 1659 aa29.05■■■□□ 2.24
CHID1-218ENST00000531010 HRCP23327 699 aa29.05■■■□□ 2.24
CHID1-218ENST00000531010 ARHGAP31Q2M1Z3 1444 aa29.03■■■□□ 2.24
CHID1-218ENST00000531010 FBXO31Q5XUX0 539 aaPredicted RBP29.01■■■□□ 2.23
CHID1-218ENST00000531010 MPHOSPH9Q99550 1183 aa28.99■■■□□ 2.23
CHID1-218ENST00000531010 ERVK-7P63135 1459 aa28.98■■■□□ 2.23
CHID1-218ENST00000531010 SYNMO15061 1565 aa28.98■■■□□ 2.23
CHID1-218ENST00000531010 SPATA31D1Q6ZQQ2 1576 aa28.98■■■□□ 2.23
CHID1-218ENST00000531010 FOXD1Q16676 465 aa28.98■■■□□ 2.23
CHID1-218ENST00000531010 SLC4A1APQ9BWU0 796 aaKnown RBP28.98■■■□□ 2.23
CHID1-218ENST00000531010 SPHKAPQ2M3C7 1700 aa28.97■■■□□ 2.23
CHID1-218ENST00000531010 PKD2Q13563 968 aa28.96■■■□□ 2.23
CHID1-218ENST00000531010 RPRD2Q5VT52 1461 aaKnown RBP28.94■■■□□ 2.22
CHID1-218ENST00000531010 NOS1P29475 1434 aa28.93■■■□□ 2.22
CHID1-218ENST00000531010 UGGT1Q9NYU2 1555 aa28.92■■■□□ 2.22
CHID1-218ENST00000531010 PLA2R1Q13018 1463 aa28.91■■■□□ 2.22
CHID1-218ENST00000531010 MYO3AQ8NEV4 1616 aa28.9■■■□□ 2.22
CHID1-218ENST00000531010 DHX57Q6P158 1386 aaKnown RBP28.89■■■□□ 2.22
CHID1-218ENST00000531010 ACIN1Q9UKV3 1341 aaKnown RBP28.88■■■□□ 2.21
CHID1-218ENST00000531010 PTPRTO14522 1441 aa28.86■■■□□ 2.21
CHID1-218ENST00000531010 PIK3C2BO00750 1634 aa28.86■■■□□ 2.21
CHID1-218ENST00000531010 TNRQ92752 1358 aa28.86■■■□□ 2.21
CHID1-218ENST00000531010 CLTCL1P53675 1640 aa28.85■■■□□ 2.21
CHID1-218ENST00000531010 TRPM2O94759 1503 aa28.84■■■□□ 2.21
CHID1-218ENST00000531010 SETD1BQ9UPS6 1966 aaKnown RBP28.82■■■□□ 2.2
CHID1-218ENST00000531010 ZNF142P52746 1687 aaPredicted RBP28.8■■■□□ 2.2
CHID1-218ENST00000531010 MYO5BQ9ULV0 1848 aa28.8■■■□□ 2.2
CHID1-218ENST00000531010 ANKRD30BQ9BXX2 1392 aa28.76■■■□□ 2.2
CHID1-218ENST00000531010 CEP170BQ9Y4F5 1589 aaPredicted RBP28.76■■■□□ 2.19
CHID1-218ENST00000531010 UBR1Q8IWV7 1749 aa28.75■■■□□ 2.19
CHID1-218ENST00000531010 IDI1Q13907 227 aa28.73■■■□□ 2.19
CHID1-218ENST00000531010 LMTK3Q96Q04 1460 aa28.72■■■□□ 2.19
CHID1-218ENST00000531010 NLRP1Q9C000 1473 aa28.72■■■□□ 2.19
CHID1-218ENST00000531010 TMEM131LA2VDJ0 1609 aa28.71■■■□□ 2.19
CHID1-218ENST00000531010 A2ML1A8K2U0 1454 aa28.71■■■□□ 2.19
CHID1-218ENST00000531010 UHRF1BP1Q6BDS2 1440 aa28.69■■■□□ 2.18
CHID1-218ENST00000531010 ADGRB3O60242 1522 aa28.69■■■□□ 2.18
CHID1-218ENST00000531010 KIF1BO60333 1816 aa28.69■■■□□ 2.18
CHID1-218ENST00000531010 KDM5AP29375 1690 aaKnown RBP28.65■■■□□ 2.18
CHID1-218ENST00000531010 CCDC144AA2RUR9 1427 aa28.64■■■□□ 2.18
CHID1-218ENST00000531010 SLC52A1Q9NWF4 448 aa28.64■■■□□ 2.18
CHID1-218ENST00000531010 SIN3AQ96ST3 1273 aa28.6■■■□□ 2.17
CHID1-218ENST00000531010 AEBP2Q6ZN18 517 aaPredicted RBP28.59■■■□□ 2.17
CHID1-218ENST00000531010 HSPA2P54652 639 aa28.58■■■□□ 2.17
CHID1-218ENST00000531010 SPATA31E1Q6ZUB1 1445 aa28.58■■■□□ 2.17
CHID1-218ENST00000531010 CHGAP10645 457 aaKnown RBP28.57■■■□□ 2.16
CHID1-218ENST00000531010 IFT172Q9UG01 1749 aa28.54■■■□□ 2.16
CHID1-218ENST00000531010 ARHGAP23Q9P227 1491 aa28.53■■■□□ 2.16
CHID1-218ENST00000531010 PPLO60437 1756 aa28.52■■■□□ 2.16
CHID1-218ENST00000531010 NEURL4Q96JN8 1562 aa28.51■■■□□ 2.15
CHID1-218ENST00000531010 SLIT1O75093 1534 aa28.51■■■□□ 2.15
CHID1-218ENST00000531010 NEXMIFQ5QGS0 1516 aa28.51■■■□□ 2.15
CHID1-218ENST00000531010 STRCQ7RTU9 1775 aa28.51■■■□□ 2.15
CHID1-218ENST00000531010 CCER1Q8TC90 406 aaPredicted RBP28.5■■■□□ 2.15
CHID1-218ENST00000531010 STAG3Q9UJ98 1225 aa28.5■■■□□ 2.15
CHID1-218ENST00000531010 ZFYVE9O95405 1425 aa28.5■■■□□ 2.15
CHID1-218ENST00000531010 POLR1AO95602 1720 aaPredicted RBP28.49■■■□□ 2.15
CHID1-218ENST00000531010 TMEM2Q9UHN6 1383 aa28.48■■■□□ 2.15
CHID1-218ENST00000531010 NEUROD1Q13562 356 aa28.47■■■□□ 2.15
CHID1-218ENST00000531010 RIMS2Q9UQ26 1411 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms