RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 RNF17Q9BXT8 1623 aaKnown RBP28.82■■■□□ 2.2
GMDS-208ENST00000530927 EIF2AK4Q9P2K8 1649 aaKnown RBP28.81■■■□□ 2.2
GMDS-208ENST00000530927 PREX1Q8TCU6 1659 aa28.8■■■□□ 2.2
GMDS-208ENST00000530927 MROH1Q8NDA8 1641 aa28.8■■■□□ 2.2
GMDS-208ENST00000530927 NCOA1Q15788 1441 aa28.79■■■□□ 2.2
GMDS-208ENST00000530927 ANKRD30AQ9BXX3 1397 aa28.78■■■□□ 2.2
GMDS-208ENST00000530927 KDM5DQ9BY66 1539 aa28.78■■■□□ 2.2
GMDS-208ENST00000530927 ADGRL2O95490 1459 aa28.77■■■□□ 2.2
GMDS-208ENST00000530927 ITGAEP38570 1179 aa28.77■■■□□ 2.2
GMDS-208ENST00000530927 PPP6R1Q9UPN7 881 aa28.76■■■□□ 2.19
GMDS-208ENST00000530927 ERBINQ96RT1 1412 aa28.75■■■□□ 2.19
GMDS-208ENST00000530927 WASHC2CQ9Y4E1 1318 aa28.75■■■□□ 2.19
GMDS-208ENST00000530927 ABCC3O15438 1527 aa28.72■■■□□ 2.19
GMDS-208ENST00000530927 UHRF1BP1Q6BDS2 1440 aa28.71■■■□□ 2.19
GMDS-208ENST00000530927 CEP152O94986 1710 aa28.7■■■□□ 2.19
GMDS-208ENST00000530927 RRBP1Q9P2E9 1410 aaKnown RBP28.7■■■□□ 2.18
GMDS-208ENST00000530927 NPATQ14207 1427 aa28.69■■■□□ 2.18
GMDS-208ENST00000530927 FBXO31Q5XUX0 539 aaPredicted RBP28.69■■■□□ 2.18
GMDS-208ENST00000530927 SETD1BQ9UPS6 1966 aaKnown RBP28.68■■■□□ 2.18
GMDS-208ENST00000530927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.68■■■□□ 2.184e-7■■□□□ 13.9
GMDS-208ENST00000530927 FAM135AQ9P2D6 1515 aa28.67■■■□□ 2.18
GMDS-208ENST00000530927 PRDM15P57071 1507 aaPredicted RBP28.67■■■□□ 2.18
GMDS-208ENST00000530927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.66■■■□□ 2.184e-6■■■■□ 20.1
GMDS-208ENST00000530927 DEPDC5O75140 1603 aa28.66■■■□□ 2.18
GMDS-208ENST00000530927 PZPP20742 1482 aa28.65■■■□□ 2.18
GMDS-208ENST00000530927 ZC3H13Q5T200 1668 aaKnown RBP28.65■■■□□ 2.18
GMDS-208ENST00000530927 MYO3AQ8NEV4 1616 aa28.64■■■□□ 2.18
GMDS-208ENST00000530927 ANKRD50Q9ULJ7 1429 aa28.62■■■□□ 2.17
GMDS-208ENST00000530927 CAMSAP1Q5T5Y3 1602 aa28.61■■■□□ 2.17
GMDS-208ENST00000530927 ROCK1Q13464 1354 aa28.59■■■□□ 2.17
GMDS-208ENST00000530927 TNRQ92752 1358 aa28.56■■■□□ 2.16
GMDS-208ENST00000530927 CEP170BQ9Y4F5 1589 aaPredicted RBP28.55■■■□□ 2.16
GMDS-208ENST00000530927 ZNF142P52746 1687 aaPredicted RBP28.55■■■□□ 2.16
GMDS-208ENST00000530927 STRCQ7RTU9 1775 aa28.55■■■□□ 2.16
GMDS-208ENST00000530927 VWDEQ8N2E2 1590 aa28.55■■■□□ 2.16
GMDS-208ENST00000530927 CFAP65Q6ZU64 1925 aaKnown RBP28.53■■■□□ 2.16
GMDS-208ENST00000530927 ERVK-7P63135 1459 aa28.51■■■□□ 2.15
GMDS-208ENST00000530927 KANK1Q14678 1352 aa28.51■■■□□ 2.15
GMDS-208ENST00000530927 SPATA31D1Q6ZQQ2 1576 aa28.49■■■□□ 2.15
GMDS-208ENST00000530927 UNC13BO14795 1591 aa28.48■■■□□ 2.15
GMDS-208ENST00000530927 LMTK2Q8IWU2 1503 aa28.47■■■□□ 2.15
GMDS-208ENST00000530927 A2ML1A8K2U0 1454 aa28.47■■■□□ 2.15
GMDS-208ENST00000530927 ARHGAP31Q2M1Z3 1444 aa28.44■■■□□ 2.14
GMDS-208ENST00000530927 EFCAB6Q5THR3 1501 aa28.43■■■□□ 2.14
GMDS-208ENST00000530927 NAIPQ13075 1403 aa28.4■■■□□ 2.14
GMDS-208ENST00000530927 NCKAP5LQ9HCH0 1330 aa28.4■■■□□ 2.14
GMDS-208ENST00000530927 NLRP1Q9C000 1473 aa28.39■■■□□ 2.14
GMDS-208ENST00000530927 GCC2Q8IWJ2 1684 aa28.38■■■□□ 2.13
GMDS-208ENST00000530927 TET3O43151 1660 aa28.37■■■□□ 2.13
GMDS-208ENST00000530927 UGGT1Q9NYU2 1555 aa28.36■■■□□ 2.13
GMDS-208ENST00000530927 IQGAP3Q86VI3 1631 aa28.35■■■□□ 2.13
GMDS-208ENST00000530927 SYNMO15061 1565 aa28.35■■■□□ 2.13
GMDS-208ENST00000530927 NUP155O75694 1391 aa28.34■■■□□ 2.13
GMDS-208ENST00000530927 PLA2R1Q13018 1463 aa28.34■■■□□ 2.13
GMDS-208ENST00000530927 E9PCH4 1651 aa28.31■■■□□ 2.12
GMDS-208ENST00000530927 HFM1A2PYH4 1435 aa28.31■■■□□ 2.12
GMDS-208ENST00000530927 NOS1P29475 1434 aa28.3■■■□□ 2.12
GMDS-208ENST00000530927 PIK3C2BO00750 1634 aa28.3■■■□□ 2.12
GMDS-208ENST00000530927 UBR1Q8IWV7 1749 aa28.3■■■□□ 2.12
GMDS-208ENST00000530927 PTPRTO14522 1441 aa28.28■■■□□ 2.12
GMDS-208ENST00000530927 DMRT2Q9Y5R5 561 aa28.26■■■□□ 2.12
GMDS-208ENST00000530927 NEURL4Q96JN8 1562 aa28.26■■■□□ 2.11
GMDS-208ENST00000530927 POLR1AO95602 1720 aaPredicted RBP28.26■■■□□ 2.11
GMDS-208ENST00000530927 THEMISQ8N1K5 641 aaPredicted RBP28.26■■■□□ 2.11
GMDS-208ENST00000530927 RPRD2Q5VT52 1461 aaKnown RBP28.25■■■□□ 2.11
GMDS-208ENST00000530927 IDI1Q13907 227 aa28.25■■■□□ 2.11
GMDS-208ENST00000530927 PKD2Q13563 968 aa28.24■■■□□ 2.11
GMDS-208ENST00000530927 ANKLE2Q86XL3 938 aa28.18■■■□□ 2.1
GMDS-208ENST00000530927 TRIM52Q96A61 297 aa28.17■■■□□ 2.1
GMDS-208ENST00000530927 ADGRB3O60242 1522 aa28.15■■■□□ 2.1
GMDS-208ENST00000530927 STAG3Q9UJ98 1225 aa28.15■■■□□ 2.1
GMDS-208ENST00000530927 LTKP29376 864 aa28.14■■■□□ 2.1
GMDS-208ENST00000530927 ARHGAP23Q9P227 1491 aa28.14■■■□□ 2.09
GMDS-208ENST00000530927 ZNF335Q9H4Z2 1342 aaPredicted RBP28.13■■■□□ 2.09
GMDS-208ENST00000530927 SLIT1O75093 1534 aa28.13■■■□□ 2.09
GMDS-208ENST00000530927 MYO5BQ9ULV0 1848 aa28.12■■■□□ 2.09
GMDS-208ENST00000530927 LTBP4Q8N2S1 1624 aa28.12■■■□□ 2.09
GMDS-208ENST00000530927 SLC52A1Q9NWF4 448 aa28.11■■■□□ 2.09
GMDS-208ENST00000530927 NPHP4O75161 1426 aaPredicted RBP28.11■■■□□ 2.09
GMDS-208ENST00000530927 KDM5AP29375 1690 aaKnown RBP28.1■■■□□ 2.09
GMDS-208ENST00000530927 MED14O60244 1454 aa28.1■■■□□ 2.09
GMDS-208ENST00000530927 IQGAP1P46940 1657 aa28.09■■■□□ 2.09
GMDS-208ENST00000530927 SPHKAPQ2M3C7 1700 aa28.09■■■□□ 2.09
GMDS-208ENST00000530927 TMEM2Q9UHN6 1383 aa28.09■■■□□ 2.09
GMDS-208ENST00000530927 SCAF11Q99590 1463 aaKnown RBP28.09■■■□□ 2.09
GMDS-208ENST00000530927 CERKQ8TCT0 537 aa28.09■■■□□ 2.09
GMDS-208ENST00000530927 TMEM131LA2VDJ0 1609 aa28.08■■■□□ 2.09
GMDS-208ENST00000530927 ILDR1Q86SU0 546 aaPredicted RBP28.08■■■□□ 2.09
GMDS-208ENST00000530927 TXNDC2Q86VQ3 553 aa28.08■■■□□ 2.09
GMDS-208ENST00000530927 CHGAP10645 457 aaKnown RBP28.06■■■□□ 2.08
GMDS-208ENST00000530927 SETD5Q9C0A6 1442 aa28.04■■■□□ 2.08
GMDS-208ENST00000530927 SLC4A1APQ9BWU0 796 aaKnown RBP28.04■■■□□ 2.08
GMDS-208ENST00000530927 SENP3Q9H4L4 574 aaPredicted RBP28.03■■■□□ 2.08
GMDS-208ENST00000530927 FOXD1Q16676 465 aa28.02■■■□□ 2.08
GMDS-208ENST00000530927 CLTCL1P53675 1640 aa28■■■□□ 2.07
GMDS-208ENST00000530927 EID1Q9Y6B2 187 aa28■■■□□ 2.07
GMDS-208ENST00000530927 RAB3GAP2Q9H2M9 1393 aa27.99■■■□□ 2.07
GMDS-208ENST00000530927 ZFYVE9O95405 1425 aa27.98■■■□□ 2.07
GMDS-208ENST00000530927 TRPM2O94759 1503 aa27.98■■■□□ 2.07
GMDS-208ENST00000530927 NUTM2DQ5VT03 806 aaPredicted RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms