RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 ROCK1Q13464 1354 aa22.35■■□□□ 1.17
SRPRA-204ENST00000530680 GCC2Q8IWJ2 1684 aa22.34■■□□□ 1.17
SRPRA-204ENST00000530680 AGLP35573 1532 aa22.34■■□□□ 1.17
SRPRA-204ENST00000530680 DHX29Q7Z478 1369 aaKnown RBP22.34■■□□□ 1.17
SRPRA-204ENST00000530680 ERBINQ96RT1 1412 aa22.33■■□□□ 1.17
SRPRA-204ENST00000530680 STRCQ7RTU9 1775 aa22.33■■□□□ 1.16
SRPRA-204ENST00000530680 SETD1BQ9UPS6 1966 aaKnown RBP22.32■■□□□ 1.16
SRPRA-204ENST00000530680 CEBPAP49715 358 aaPredicted RBP22.31■■□□□ 1.16
SRPRA-204ENST00000530680 UHRF1BP1Q6BDS2 1440 aa22.3■■□□□ 1.16
SRPRA-204ENST00000530680 KIF3BO15066 747 aa22.28■■□□□ 1.16
SRPRA-204ENST00000530680 DMRT2Q9Y5R5 561 aa22.28■■□□□ 1.16
SRPRA-204ENST00000530680 ESF1Q9H501 851 aaKnown RBP22.27■■□□□ 1.16
SRPRA-204ENST00000530680 ANKRD50Q9ULJ7 1429 aa22.27■■□□□ 1.16
SRPRA-204ENST00000530680 RNF17Q9BXT8 1623 aaKnown RBP22.27■■□□□ 1.16
SRPRA-204ENST00000530680 C3P01024 1663 aa22.25■■□□□ 1.15
SRPRA-204ENST00000530680 GGT6Q6P531 493 aa22.24■■□□□ 1.15
SRPRA-204ENST00000530680 HFM1A2PYH4 1435 aa22.23■■□□□ 1.15
SRPRA-204ENST00000530680 DEPDC5O75140 1603 aa22.21■■□□□ 1.15
SRPRA-204ENST00000530680 CLTCQ00610 1675 aaKnown RBP22.21■■□□□ 1.15
SRPRA-204ENST00000530680 TRIM26Q12899 539 aaPredicted RBP22.21■■□□□ 1.15
SRPRA-204ENST00000530680 ZC3H13Q5T200 1668 aaKnown RBP22.2■■□□□ 1.15
SRPRA-204ENST00000530680 KANK1Q14678 1352 aa22.2■■□□□ 1.14
SRPRA-204ENST00000530680 NAIPQ13075 1403 aa22.2■■□□□ 1.14
SRPRA-204ENST00000530680 PRDM15P57071 1507 aaPredicted RBP22.19■■□□□ 1.14
SRPRA-204ENST00000530680 CEP152O94986 1710 aa22.18■■□□□ 1.14
SRPRA-204ENST00000530680 KDM5DQ9BY66 1539 aa22.18■■□□□ 1.14
SRPRA-204ENST00000530680 FAM135AQ9P2D6 1515 aa22.18■■□□□ 1.14
SRPRA-204ENST00000530680 DISP3Q9P2K9 1392 aa22.18■■□□□ 1.14
SRPRA-204ENST00000530680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.18■■□□□ 1.142e-7■■□□□ 13.3
SRPRA-204ENST00000530680 UNC13BO14795 1591 aa22.17■■□□□ 1.14
SRPRA-204ENST00000530680 PTPRTO14522 1441 aa22.17■■□□□ 1.14
SRPRA-204ENST00000530680 CNTLNQ9NXG0 1405 aa22.16■■□□□ 1.14
SRPRA-204ENST00000530680 MROH2AA6NES4 1674 aa22.16■■□□□ 1.14
SRPRA-204ENST00000530680 MROH1Q8NDA8 1641 aa22.16■■□□□ 1.14
SRPRA-204ENST00000530680 WASHC2CQ9Y4E1 1318 aa22.13■■□□□ 1.13
SRPRA-204ENST00000530680 SETD5Q9C0A6 1442 aa22.13■■□□□ 1.13
SRPRA-204ENST00000530680 PPP6R1Q9UPN7 881 aa22.12■■□□□ 1.13
SRPRA-204ENST00000530680 CAMSAP1Q5T5Y3 1602 aa22.11■■□□□ 1.13
SRPRA-204ENST00000530680 ABCC3O15438 1527 aa22.11■■□□□ 1.13
SRPRA-204ENST00000530680 SPATA31D1Q6ZQQ2 1576 aa22.1■■□□□ 1.13
SRPRA-204ENST00000530680 ILDR2Q71H61 639 aa22.1■■□□□ 1.13
SRPRA-204ENST00000530680 LTBP4Q8N2S1 1624 aa22.09■■□□□ 1.13
SRPRA-204ENST00000530680 IQGAP3Q86VI3 1631 aa22.09■■□□□ 1.13
SRPRA-204ENST00000530680 TRIM52Q96A61 297 aa22.08■■□□□ 1.13
SRPRA-204ENST00000530680 IQSEC2Q5JU85 1478 aa22.08■■□□□ 1.12
SRPRA-204ENST00000530680 NUP155O75694 1391 aa22.06■■□□□ 1.12
SRPRA-204ENST00000530680 TET3O43151 1660 aa22.06■■□□□ 1.12
SRPRA-204ENST00000530680 RAB3GAP2Q9H2M9 1393 aa22.05■■□□□ 1.12
SRPRA-204ENST00000530680 SOCS7O14512 581 aa22.05■■□□□ 1.12
SRPRA-204ENST00000530680 VWDEQ8N2E2 1590 aa22.04■■□□□ 1.12
SRPRA-204ENST00000530680 ACIN1Q9UKV3 1341 aaKnown RBP22.04■■□□□ 1.12
SRPRA-204ENST00000530680 NPATQ14207 1427 aa22.03■■□□□ 1.12
SRPRA-204ENST00000530680 EFCAB6Q5THR3 1501 aa22.02■■□□□ 1.12
SRPRA-204ENST00000530680 CFAP65Q6ZU64 1925 aaKnown RBP22.02■■□□□ 1.11
SRPRA-204ENST00000530680 LMTK2Q8IWU2 1503 aa22.01■■□□□ 1.11
SRPRA-204ENST00000530680 ZMYM3Q14202 1370 aa21.99■■□□□ 1.11
SRPRA-204ENST00000530680 PZPP20742 1482 aa21.98■■□□□ 1.11
SRPRA-204ENST00000530680 ZNF142P52746 1687 aaPredicted RBP21.98■■□□□ 1.11
SRPRA-204ENST00000530680 MYO3AQ8NEV4 1616 aa21.97■■□□□ 1.11
SRPRA-204ENST00000530680 PCGF6Q9BYE7 350 aa21.96■■□□□ 1.11
SRPRA-204ENST00000530680 E9PCH4 1651 aa21.95■■□□□ 1.1
SRPRA-204ENST00000530680 RPRD2Q5VT52 1461 aaKnown RBP21.93■■□□□ 1.1
SRPRA-204ENST00000530680 SLC4A1APQ9BWU0 796 aaKnown RBP21.93■■□□□ 1.1
SRPRA-204ENST00000530680 ARHGAP31Q2M1Z3 1444 aa21.92■■□□□ 1.1
SRPRA-204ENST00000530680 CEP170BQ9Y4F5 1589 aaPredicted RBP21.91■■□□□ 1.1
SRPRA-204ENST00000530680 PLA2R1Q13018 1463 aa21.91■■□□□ 1.1
SRPRA-204ENST00000530680 SPHKAPQ2M3C7 1700 aa21.91■■□□□ 1.1
SRPRA-204ENST00000530680 ERVK-7P63135 1459 aa21.9■■□□□ 1.1
SRPRA-204ENST00000530680 NCKAP5LQ9HCH0 1330 aa21.9■■□□□ 1.1
SRPRA-204ENST00000530680 ZNF335Q9H4Z2 1342 aaPredicted RBP21.89■■□□□ 1.1
SRPRA-204ENST00000530680 TNRQ92752 1358 aa21.88■■□□□ 1.09
SRPRA-204ENST00000530680 HRCP23327 699 aa21.88■■□□□ 1.09
SRPRA-204ENST00000530680 PKD2Q13563 968 aa21.87■■□□□ 1.09
SRPRA-204ENST00000530680 FBXO31Q5XUX0 539 aaPredicted RBP21.85■■□□□ 1.09
SRPRA-204ENST00000530680 UBAP1LF5GYI3 381 aa21.84■■□□□ 1.09
SRPRA-204ENST00000530680 MPHOSPH9Q99550 1183 aa21.84■■□□□ 1.09
SRPRA-204ENST00000530680 SYNMO15061 1565 aa21.82■■□□□ 1.08
SRPRA-204ENST00000530680 NLRP1Q9C000 1473 aa21.8■■□□□ 1.08
SRPRA-204ENST00000530680 TRPM2O94759 1503 aa21.79■■□□□ 1.08
SRPRA-204ENST00000530680 NOS1P29475 1434 aa21.79■■□□□ 1.08
SRPRA-204ENST00000530680 A2ML1A8K2U0 1454 aa21.78■■□□□ 1.08
SRPRA-204ENST00000530680 POLR1AO95602 1720 aaPredicted RBP21.78■■□□□ 1.08
SRPRA-204ENST00000530680 PIK3C2BO00750 1634 aa21.77■■□□□ 1.07
SRPRA-204ENST00000530680 STAG3Q9UJ98 1225 aa21.76■■□□□ 1.07
SRPRA-204ENST00000530680 KIF1BO60333 1816 aa21.76■■□□□ 1.07
SRPRA-204ENST00000530680 FOXD1Q16676 465 aa21.75■■□□□ 1.07
SRPRA-204ENST00000530680 UGGT1Q9NYU2 1555 aa21.74■■□□□ 1.07
SRPRA-204ENST00000530680 CLTCL1P53675 1640 aa21.73■■□□□ 1.07
SRPRA-204ENST00000530680 UBR1Q8IWV7 1749 aa21.72■■□□□ 1.07
SRPRA-204ENST00000530680 ADGRB3O60242 1522 aa21.72■■□□□ 1.07
SRPRA-204ENST00000530680 SLC52A1Q9NWF4 448 aa21.72■■□□□ 1.07
SRPRA-204ENST00000530680 CCDC144AA2RUR9 1427 aa21.72■■□□□ 1.07
SRPRA-204ENST00000530680 NEURL4Q96JN8 1562 aa21.71■■□□□ 1.07
SRPRA-204ENST00000530680 CHGAP10645 457 aaKnown RBP21.71■■□□□ 1.07
SRPRA-204ENST00000530680 KDM5AP29375 1690 aaKnown RBP21.71■■□□□ 1.07
SRPRA-204ENST00000530680 MYO5BQ9ULV0 1848 aa21.71■■□□□ 1.07
SRPRA-204ENST00000530680 CPS1P31327 1500 aa21.7■■□□□ 1.07
SRPRA-204ENST00000530680 SCAF1Q9H7N4 1312 aaKnown RBP21.66■■□□□ 1.06
SRPRA-204ENST00000530680 IDI1Q13907 227 aa21.66■■□□□ 1.06
SRPRA-204ENST00000530680 MED1Q15648 1581 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms