RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 DIP2CQ9Y2E4 1556 aa12.48□□□□□ -0.41
NEDD8-MDP1-201ENST00000530579 KANK1Q14678 1352 aa12.48□□□□□ -0.41
NEDD8-MDP1-201ENST00000530579 ABCA6Q8N139 1617 aa12.48□□□□□ -0.41
NEDD8-MDP1-201ENST00000530579 MLECQ14165 292 aa12.47□□□□□ -0.41
NEDD8-MDP1-201ENST00000530579 PKD2Q13563 968 aa12.46□□□□□ -0.41
NEDD8-MDP1-201ENST00000530579 FOXD1Q16676 465 aa12.45□□□□□ -0.42
NEDD8-MDP1-201ENST00000530579 WASHC2CQ9Y4E1 1318 aa12.44□□□□□ -0.42
NEDD8-MDP1-201ENST00000530579 ARHGEF40Q8TER5 1519 aa12.43□□□□□ -0.42
NEDD8-MDP1-201ENST00000530579 PZPP20742 1482 aa12.42□□□□□ -0.42
NEDD8-MDP1-201ENST00000530579 ESF1Q9H501 851 aaKnown RBP12.42□□□□□ -0.42
NEDD8-MDP1-201ENST00000530579 EIF2AK4Q9P2K8 1649 aaKnown RBP12.41□□□□□ -0.42
NEDD8-MDP1-201ENST00000530579 CLSPNQ9HAW4 1339 aa12.4□□□□□ -0.42
NEDD8-MDP1-201ENST00000530579 UNC13BO14795 1591 aa12.4□□□□□ -0.42
NEDD8-MDP1-201ENST00000530579 NEUROD1Q13562 356 aa12.4□□□□□ -0.42
NEDD8-MDP1-201ENST00000530579 PPP6R1Q9UPN7 881 aa12.4□□□□□ -0.42
NEDD8-MDP1-201ENST00000530579 AGLP35573 1532 aa12.4□□□□□ -0.42
NEDD8-MDP1-201ENST00000530579 FAM135AQ9P2D6 1515 aa12.4□□□□□ -0.42
NEDD8-MDP1-201ENST00000530579 REREQ9P2R6 1566 aa12.39□□□□□ -0.43
NEDD8-MDP1-201ENST00000530579 KDM5DQ9BY66 1539 aa12.39□□□□□ -0.43
NEDD8-MDP1-201ENST00000530579 SIN3AQ96ST3 1273 aa12.39□□□□□ -0.43
NEDD8-MDP1-201ENST00000530579 ZEB1P37275 1124 aaPredicted RBP12.38□□□□□ -0.43
NEDD8-MDP1-201ENST00000530579 RNF17Q9BXT8 1623 aaKnown RBP12.36□□□□□ -0.43
NEDD8-MDP1-201ENST00000530579 PRDM15P57071 1507 aaPredicted RBP12.36□□□□□ -0.43
NEDD8-MDP1-201ENST00000530579 ANKRD30BQ9BXX2 1392 aa12.35□□□□□ -0.43
NEDD8-MDP1-201ENST00000530579 DEPDC5O75140 1603 aa12.35□□□□□ -0.43
NEDD8-MDP1-201ENST00000530579 IQGAP3Q86VI3 1631 aa12.35□□□□□ -0.43
NEDD8-MDP1-201ENST00000530579 MROH1Q8NDA8 1641 aa12.34□□□□□ -0.43
NEDD8-MDP1-201ENST00000530579 VWDEQ8N2E2 1590 aa12.34□□□□□ -0.43
NEDD8-MDP1-201ENST00000530579 BCORL1Q5H9F3 1711 aa12.34□□□□□ -0.43
NEDD8-MDP1-201ENST00000530579 ABCC3O15438 1527 aa12.33□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 LMTK2Q8IWU2 1503 aa12.32□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 SIGLEC1Q9BZZ2 1709 aa12.31□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 ZMYM3Q14202 1370 aa12.3□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 FBXO31Q5XUX0 539 aaPredicted RBP12.29□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 TET3O43151 1660 aa12.29□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 NPATQ14207 1427 aa12.28□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 CNTLNQ9NXG0 1405 aa12.28□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 EFCAB6Q5THR3 1501 aa12.28□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 TONSLQ96HA7 1378 aa12.28□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 ARHGAP31Q2M1Z3 1444 aa12.28□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 PLA2R1Q13018 1463 aa12.27□□□□□ -0.44
NEDD8-MDP1-201ENST00000530579 CEBPAP49715 358 aaPredicted RBP12.27□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 TIMELESSQ9UNS1 1208 aa12.27□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 PTPRTO14522 1441 aa12.27□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 RPRD2Q5VT52 1461 aaKnown RBP12.27□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 CEP152O94986 1710 aa12.26□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 CHGAP10645 457 aaKnown RBP12.26□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 RGL3Q3MIN7 710 aa12.26□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 E9PCH4 1651 aa12.26□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 CAMSAP1Q5T5Y3 1602 aa12.25□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 CLTCQ00610 1675 aaKnown RBP12.25□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 ZC3H13Q5T200 1668 aaKnown RBP12.25□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 L3MBTL2Q969R5 705 aa12.24□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 SLC52A1Q9NWF4 448 aa12.24□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 NOS1P29475 1434 aa12.22□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 IDI1Q13907 227 aa12.22□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 KDM2AQ9Y2K7 1162 aa12.22□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 TRPM2O94759 1503 aa12.21□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 ERVK-7P63135 1459 aa12.21□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 ZNF326Q5BKZ1 582 aaKnown RBP12.21□□□□□ -0.45
NEDD8-MDP1-201ENST00000530579 TNRQ92752 1358 aa12.2□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 PPP1R15AO75807 674 aaPredicted RBP12.2□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 DCAF11Q8TEB1 546 aa12.2□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 UGGT1Q9NYU2 1555 aa12.18□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 MADDQ8WXG6 1647 aa12.18□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 SPHKAPQ2M3C7 1700 aa12.17□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 FER1L4A9Z1Z3 1794 aa12.17□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 ADAMTSL3P82987 1691 aa12.16□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 CLTCL1P53675 1640 aa12.16□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 SPATA31E1Q6ZUB1 1445 aa12.16□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 SYNMO15061 1565 aa12.16□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 SPATA31D1Q6ZQQ2 1576 aa12.16□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 PREX1Q8TCU6 1659 aa12.16□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 KDM4FA0A1W2PPD8 638 aa12.15□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 MROH2AA6NES4 1674 aa12.15□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 RIMS1Q86UR5 1692 aaKnown RBP12.15□□□□□ -0.46
NEDD8-MDP1-201ENST00000530579 RPGRIP1LQ68CZ1 1315 aa12.14□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 PTPRMP28827 1452 aa12.14□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 NUTM2DQ5VT03 806 aaPredicted RBP12.13□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 STAC3Q96MF2 364 aa12.13□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 NBPF8Q3BBV2 869 aa12.12□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 C3P01024 1663 aa12.12□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 CFAP65Q6ZU64 1925 aaKnown RBP12.11□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 VGFO15240 615 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 THEMISQ8N1K5 641 aaPredicted RBP12.11□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 NLRP1Q9C000 1473 aa12.1□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 PIK3C2BO00750 1634 aa12.1□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 ADGRB3O60242 1522 aa12.1□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.09□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 SENP3Q9H4L4 574 aaPredicted RBP12.09□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 ADGRF5Q8IZF2 1346 aa12.09□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 A2ML1A8K2U0 1454 aa12.08□□□□□ -0.47
NEDD8-MDP1-201ENST00000530579 BCANQ96GW7 911 aa12.08□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 UHRF1BP1Q6BDS2 1440 aa12.07□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 TXNDC2Q86VQ3 553 aa12.07□□□□□ -0.48
NEDD8-MDP1-201ENST00000530579 NEURL4Q96JN8 1562 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms