RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 PZPP20742 1482 aa22.12■■□□□ 1.13
TM9SF1-208ENST00000529332 HECW2Q9P2P5 1572 aa22.11■■□□□ 1.13
TM9SF1-208ENST00000529332 PPRC1Q5VV67 1664 aaKnown RBP22.11■■□□□ 1.13
TM9SF1-208ENST00000529332 KIDINS220Q9ULH0 1771 aa22.11■■□□□ 1.13
TM9SF1-208ENST00000529332 SLC4A1APQ9BWU0 796 aaKnown RBP22.1■■□□□ 1.13
TM9SF1-208ENST00000529332 MYT1LQ9UL68 1186 aa22.09■■□□□ 1.13
TM9SF1-208ENST00000529332 RICTORQ6R327 1708 aa22.09■■□□□ 1.13
TM9SF1-208ENST00000529332 NUP155O75694 1391 aa22.08■■□□□ 1.12
TM9SF1-208ENST00000529332 MLH3Q9UHC1 1453 aa22.07■■□□□ 1.12
TM9SF1-208ENST00000529332 EIF2AK4Q9P2K8 1649 aaKnown RBP22.06■■□□□ 1.12
TM9SF1-208ENST00000529332 HSPA5P11021 654 aaKnown RBP22.04■■□□□ 1.12
TM9SF1-208ENST00000529332 FKBP8Q14318 412 aa22.04■■□□□ 1.12
TM9SF1-208ENST00000529332 MAGI2Q86UL8 1455 aa22.04■■□□□ 1.12
TM9SF1-208ENST00000529332 IQGAP3Q86VI3 1631 aa22.04■■□□□ 1.12
TM9SF1-208ENST00000529332 TSHZ2Q9NRE2 1034 aa22.03■■□□□ 1.12
TM9SF1-208ENST00000529332 FAM135AQ9P2D6 1515 aa22.03■■□□□ 1.12
TM9SF1-208ENST00000529332 FOXD1Q16676 465 aa22.03■■□□□ 1.12
TM9SF1-208ENST00000529332 WASHC2AQ641Q2 1341 aa22.02■■□□□ 1.12
TM9SF1-208ENST00000529332 BCANQ96GW7 911 aa22.01■■□□□ 1.11
TM9SF1-208ENST00000529332 DEPDC5O75140 1603 aa22.01■■□□□ 1.11
TM9SF1-208ENST00000529332 DHX29Q7Z478 1369 aaKnown RBP22■■□□□ 1.11
TM9SF1-208ENST00000529332 L3MBTL2Q969R5 705 aa22■■□□□ 1.11
TM9SF1-208ENST00000529332 ABCA6Q8N139 1617 aa21.99■■□□□ 1.11
TM9SF1-208ENST00000529332 FRMPD1Q5SYB0 1578 aa21.99■■□□□ 1.11
TM9SF1-208ENST00000529332 ANKRD30BQ9BXX2 1392 aa21.98■■□□□ 1.11
TM9SF1-208ENST00000529332 ZMYM4Q5VZL5 1548 aa21.98■■□□□ 1.11
TM9SF1-208ENST00000529332 A2MP01023 1474 aa21.98■■□□□ 1.11
TM9SF1-208ENST00000529332 RAPGEF3O95398 923 aa21.97■■□□□ 1.11
TM9SF1-208ENST00000529332 PKD2Q13563 968 aa21.97■■□□□ 1.11
TM9SF1-208ENST00000529332 EIF4G2P78344 907 aaKnown RBP eCLIP21.96■■□□□ 1.11
TM9SF1-208ENST00000529332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.94■■□□□ 1.1
TM9SF1-208ENST00000529332 DIP2CQ9Y2E4 1556 aa21.94■■□□□ 1.1
TM9SF1-208ENST00000529332 MYT1Q01538 1121 aa21.94■■□□□ 1.1
TM9SF1-208ENST00000529332 BCORL1Q5H9F3 1711 aa21.93■■□□□ 1.1
TM9SF1-208ENST00000529332 RPRD2Q5VT52 1461 aaKnown RBP21.93■■□□□ 1.1
TM9SF1-208ENST00000529332 PRDM15P57071 1507 aaPredicted RBP21.92■■□□□ 1.1
TM9SF1-208ENST00000529332 KANK1Q14678 1352 aa21.92■■□□□ 1.1
TM9SF1-208ENST00000529332 RNF17Q9BXT8 1623 aaKnown RBP21.92■■□□□ 1.1
TM9SF1-208ENST00000529332 KIF3BO15066 747 aa21.9■■□□□ 1.1
TM9SF1-208ENST00000529332 NEFLP07196 543 aa21.89■■□□□ 1.1
TM9SF1-208ENST00000529332 C11orf95C9JLR9 678 aaPredicted RBP21.89■■□□□ 1.09
TM9SF1-208ENST00000529332 NBPF8Q3BBV2 869 aa21.89■■□□□ 1.09
TM9SF1-208ENST00000529332 VWDEQ8N2E2 1590 aa21.88■■□□□ 1.09
TM9SF1-208ENST00000529332 MROH1Q8NDA8 1641 aa21.88■■□□□ 1.09
TM9SF1-208ENST00000529332 TET3O43151 1660 aa21.88■■□□□ 1.09
TM9SF1-208ENST00000529332 CNTLNQ9NXG0 1405 aa21.88■■□□□ 1.09
TM9SF1-208ENST00000529332 YEATS2Q9ULM3 1422 aa21.84■■□□□ 1.09
TM9SF1-208ENST00000529332 CCDC7Q96M83 1385 aa21.84■■□□□ 1.09
TM9SF1-208ENST00000529332 HNRNPUQ00839 825 aaKnown RBP eCLIP21.84■■□□□ 1.09
TM9SF1-208ENST00000529332 E9PCH4 1651 aa21.83■■□□□ 1.08
TM9SF1-208ENST00000529332 REREQ9P2R6 1566 aa21.81■■□□□ 1.08
TM9SF1-208ENST00000529332 ATP10AO60312 1499 aa21.8■■□□□ 1.08
TM9SF1-208ENST00000529332 SPATA31E1Q6ZUB1 1445 aa21.8■■□□□ 1.08
TM9SF1-208ENST00000529332 LMTK2Q8IWU2 1503 aa21.8■■□□□ 1.08
TM9SF1-208ENST00000529332 CEP152O94986 1710 aa21.79■■□□□ 1.08
TM9SF1-208ENST00000529332 CCDC184Q52MB2 194 aa21.79■■□□□ 1.08
TM9SF1-208ENST00000529332 ARHGEF40Q8TER5 1519 aa21.79■■□□□ 1.08
TM9SF1-208ENST00000529332 SPHKAPQ2M3C7 1700 aa21.78■■□□□ 1.08
TM9SF1-208ENST00000529332 CCDC144AA2RUR9 1427 aa21.77■■□□□ 1.08
TM9SF1-208ENST00000529332 TRHP20396 242 aaPredicted RBP21.77■■□□□ 1.08
TM9SF1-208ENST00000529332 COL17A1Q9UMD9 1497 aaPredicted RBP21.77■■□□□ 1.08
TM9SF1-208ENST00000529332 EFCAB6Q5THR3 1501 aa21.77■■□□□ 1.08
TM9SF1-208ENST00000529332 ZC3H13Q5T200 1668 aaKnown RBP21.76■■□□□ 1.07
TM9SF1-208ENST00000529332 PRKRIP1Q9H875 184 aaPredicted RBP21.76■■□□□ 1.07
TM9SF1-208ENST00000529332 KIF7Q2M1P5 1343 aa21.74■■□□□ 1.07
TM9SF1-208ENST00000529332 PLA2R1Q13018 1463 aa21.74■■□□□ 1.07
TM9SF1-208ENST00000529332 TRPM2O94759 1503 aa21.74■■□□□ 1.07
TM9SF1-208ENST00000529332 AGLP35573 1532 aa21.73■■□□□ 1.07
TM9SF1-208ENST00000529332 POLR1AO95602 1720 aaPredicted RBP21.73■■□□□ 1.07
TM9SF1-208ENST00000529332 GGT6Q6P531 493 aa21.73■■□□□ 1.07
TM9SF1-208ENST00000529332 ABCC3O15438 1527 aa21.72■■□□□ 1.07
TM9SF1-208ENST00000529332 CAMSAP1Q5T5Y3 1602 aa21.7■■□□□ 1.06
TM9SF1-208ENST00000529332 PTPRTO14522 1441 aa21.7■■□□□ 1.06
TM9SF1-208ENST00000529332 WASHC2CQ9Y4E1 1318 aa21.68■■□□□ 1.06
TM9SF1-208ENST00000529332 MRS2Q9HD23 443 aa21.65■■□□□ 1.06
TM9SF1-208ENST00000529332 CLTCL1P53675 1640 aa21.64■■□□□ 1.05
TM9SF1-208ENST00000529332 FAM9BQ8IZU0 186 aa21.64■■□□□ 1.05
TM9SF1-208ENST00000529332 IRX6P78412 446 aaPredicted RBP21.63■■□□□ 1.05
TM9SF1-208ENST00000529332 SIGLEC1Q9BZZ2 1709 aa21.62■■□□□ 1.05
TM9SF1-208ENST00000529332 NPATQ14207 1427 aa21.61■■□□□ 1.05
TM9SF1-208ENST00000529332 PPP6R1Q9UPN7 881 aa21.61■■□□□ 1.05
TM9SF1-208ENST00000529332 RBM19Q9Y4C8 960 aaKnown RBP21.61■■□□□ 1.05
TM9SF1-208ENST00000529332 USP47Q96K76 1375 aa21.6■■□□□ 1.05
TM9SF1-208ENST00000529332 ARHGAP31Q2M1Z3 1444 aa21.6■■□□□ 1.05
TM9SF1-208ENST00000529332 KIF1BO60333 1816 aa21.6■■□□□ 1.05
TM9SF1-208ENST00000529332 NEURL4Q96JN8 1562 aa21.59■■□□□ 1.05
TM9SF1-208ENST00000529332 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
TM9SF1-208ENST00000529332 UHRF1BP1Q6BDS2 1440 aa21.58■■□□□ 1.05
TM9SF1-208ENST00000529332 ZBED9Q6R2W3 1325 aa21.57■■□□□ 1.04
TM9SF1-208ENST00000529332 CFAP65Q6ZU64 1925 aaKnown RBP21.57■■□□□ 1.04
TM9SF1-208ENST00000529332 CLTCQ00610 1675 aaKnown RBP21.55■■□□□ 1.04
TM9SF1-208ENST00000529332 DCAF11Q8TEB1 546 aa21.55■■□□□ 1.04
TM9SF1-208ENST00000529332 RGL3Q3MIN7 710 aa21.53■■□□□ 1.04
TM9SF1-208ENST00000529332 PREX1Q8TCU6 1659 aa21.53■■□□□ 1.04
TM9SF1-208ENST00000529332 NOS1P29475 1434 aa21.52■■□□□ 1.04
TM9SF1-208ENST00000529332 ANP32EQ9BTT0 268 aa21.52■■□□□ 1.04
TM9SF1-208ENST00000529332 UGGT1Q9NYU2 1555 aa21.52■■□□□ 1.04
TM9SF1-208ENST00000529332 RALGAPBQ86X10 1494 aa21.52■■□□□ 1.04
TM9SF1-208ENST00000529332 ERICH6BQ5W0A0 696 aa21.5■■□□□ 1.03
TM9SF1-208ENST00000529332 POLR3GLQ9BT43 218 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms