RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 NISCHQ9Y2I1 1504 aa34.66■■■■□ 3.14
TM9SF1-208ENST00000529332 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
TM9SF1-208ENST00000529332 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
TM9SF1-208ENST00000529332 DCAF1Q9Y4B6 1507 aa28.72■■■□□ 2.19
TM9SF1-208ENST00000529332 ABCC9O60706 1549 aa28.7■■■□□ 2.19
TM9SF1-208ENST00000529332 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
TM9SF1-208ENST00000529332 MYO15BQ96JP2 1530 aa28.43■■■□□ 2.14
TM9SF1-208ENST00000529332 NACADO15069 1562 aa28.29■■■□□ 2.12
TM9SF1-208ENST00000529332 SHROOM4Q9ULL8 1493 aa28.09■■■□□ 2.09
TM9SF1-208ENST00000529332 RB1CC1Q8TDY2 1594 aa28.09■■■□□ 2.09
TM9SF1-208ENST00000529332 SCRIBQ14160 1630 aa27.84■■■□□ 2.05
TM9SF1-208ENST00000529332 UNC13AQ9UPW8 1703 aa27.51■■□□□ 1.99
TM9SF1-208ENST00000529332 SUPT5HO00267 1087 aaKnown RBP27.27■■□□□ 1.96
TM9SF1-208ENST00000529332 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
TM9SF1-208ENST00000529332 PABPN1Q86U42 306 aaKnown RBP eCLIP26.98■■□□□ 1.91
TM9SF1-208ENST00000529332 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
TM9SF1-208ENST00000529332 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
TM9SF1-208ENST00000529332 RSF1Q96T23 1441 aaPredicted RBP26.8■■□□□ 1.88
TM9SF1-208ENST00000529332 MROH2BQ7Z745 1585 aa26.74■■□□□ 1.87
TM9SF1-208ENST00000529332 SMARCA4P51532 1647 aa26.71■■□□□ 1.87
TM9SF1-208ENST00000529332 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.85
TM9SF1-208ENST00000529332 WIZO95785 1651 aa26.54■■□□□ 1.84
TM9SF1-208ENST00000529332 PEG3Q9GZU2 1588 aa26.39■■□□□ 1.82
TM9SF1-208ENST00000529332 EIF4G1Q04637 1599 aaKnown RBP26.38■■□□□ 1.81
TM9SF1-208ENST00000529332 SMARCA2P51531 1590 aa26.31■■□□□ 1.8
TM9SF1-208ENST00000529332 TOP2AP11388 1531 aaKnown RBP26.31■■□□□ 1.8
TM9SF1-208ENST00000529332 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
TM9SF1-208ENST00000529332 BAZ1BQ9UIG0 1483 aaKnown RBP26.13■■□□□ 1.77
TM9SF1-208ENST00000529332 HMGXB3Q12766 1538 aa26.07■■□□□ 1.76
TM9SF1-208ENST00000529332 NCAPD3P42695 1498 aa26.05■■□□□ 1.76
TM9SF1-208ENST00000529332 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
TM9SF1-208ENST00000529332 CCDC88BA6NC98 1476 aa25.97■■□□□ 1.75
TM9SF1-208ENST00000529332 HRCP23327 699 aa25.78■■□□□ 1.72
TM9SF1-208ENST00000529332 LOC105371045A0A1W2PR82 267 aa25.77■■□□□ 1.72
TM9SF1-208ENST00000529332 PCGF6Q9BYE7 350 aa25.73■■□□□ 1.71
TM9SF1-208ENST00000529332 PRDM2Q13029 1718 aa25.45■■□□□ 1.66
TM9SF1-208ENST00000529332 CFTRP13569 1480 aa25.44■■□□□ 1.66
TM9SF1-208ENST00000529332 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
TM9SF1-208ENST00000529332 ABCC8Q09428 1581 aa25.39■■□□□ 1.65
TM9SF1-208ENST00000529332 CADPSQ9ULU8 1353 aa25.36■■□□□ 1.65
TM9SF1-208ENST00000529332 DNAJC5BQ9UF47 199 aa25.3■■□□□ 1.64
TM9SF1-208ENST00000529332 WRNQ14191 1432 aaPredicted RBP eCLIP25.27■■□□□ 1.64
TM9SF1-208ENST00000529332 LAMC3Q9Y6N6 1575 aa25.26■■□□□ 1.63
TM9SF1-208ENST00000529332 TRIM26Q12899 539 aaPredicted RBP25.25■■□□□ 1.63
TM9SF1-208ENST00000529332 PPARGC1BQ86YN6 1023 aaKnown RBP25.24■■□□□ 1.63
TM9SF1-208ENST00000529332 FAM9AQ8IZU1 332 aaPredicted RBP25.18■■□□□ 1.62
TM9SF1-208ENST00000529332 SYNJ1O43426 1573 aa25.16■■□□□ 1.62
TM9SF1-208ENST00000529332 NESP48681 1621 aa25.14■■□□□ 1.61
TM9SF1-208ENST00000529332 TOP2BQ02880 1626 aa25.12■■□□□ 1.61
TM9SF1-208ENST00000529332 BIVM-ERCC5R4GMW8 1640 aa25.12■■□□□ 1.61
TM9SF1-208ENST00000529332 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
TM9SF1-208ENST00000529332 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
TM9SF1-208ENST00000529332 CUX1P39880 1505 aa25.03■■□□□ 1.6
TM9SF1-208ENST00000529332 CEP164Q9UPV0 1460 aa24.99■■□□□ 1.59
TM9SF1-208ENST00000529332 EHMT2Q96KQ7 1210 aa24.94■■□□□ 1.58
TM9SF1-208ENST00000529332 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
TM9SF1-208ENST00000529332 EEA1Q15075 1411 aa24.9■■□□□ 1.58
TM9SF1-208ENST00000529332 DNMBPQ6XZF7 1577 aa24.9■■□□□ 1.58
TM9SF1-208ENST00000529332 SOGA1O94964 1423 aa24.85■■□□□ 1.57
TM9SF1-208ENST00000529332 TOPBP1Q92547 1522 aa24.82■■□□□ 1.56
TM9SF1-208ENST00000529332 FGD5Q6ZNL6 1462 aa24.79■■□□□ 1.56
TM9SF1-208ENST00000529332 URB2Q14146 1524 aaKnown RBP24.78■■□□□ 1.56
TM9SF1-208ENST00000529332 RUSC2Q8N2Y8 1516 aa24.74■■□□□ 1.55
TM9SF1-208ENST00000529332 MRC2Q9UBG0 1479 aa24.71■■□□□ 1.55
TM9SF1-208ENST00000529332 ZEB1P37275 1124 aaPredicted RBP24.69■■□□□ 1.54
TM9SF1-208ENST00000529332 ERCC6Q03468 1493 aa24.68■■□□□ 1.54
TM9SF1-208ENST00000529332 CSRNP3Q8WYN3 585 aa24.68■■□□□ 1.54
TM9SF1-208ENST00000529332 POLA1P09884 1462 aaPredicted RBP24.68■■□□□ 1.54
TM9SF1-208ENST00000529332 KIF27Q86VH2 1401 aa24.66■■□□□ 1.54
TM9SF1-208ENST00000529332 CUX2O14529 1486 aa24.6■■□□□ 1.53
TM9SF1-208ENST00000529332 WDR62O43379 1518 aa24.6■■□□□ 1.53
TM9SF1-208ENST00000529332 KIF21BO75037 1637 aa24.59■■□□□ 1.53
TM9SF1-208ENST00000529332 ABCA10Q8WWZ4 1543 aa24.58■■□□□ 1.53
TM9SF1-208ENST00000529332 WDR97A6NE52 1622 aa24.56■■□□□ 1.52
TM9SF1-208ENST00000529332 RAD54L2Q9Y4B4 1467 aa24.55■■□□□ 1.52
TM9SF1-208ENST00000529332 THOC2Q8NI27 1593 aaKnown RBP24.55■■□□□ 1.52
TM9SF1-208ENST00000529332 GOLGA3Q08378 1498 aa24.53■■□□□ 1.52
TM9SF1-208ENST00000529332 TARBP1Q13395 1621 aaKnown RBP24.48■■□□□ 1.51
TM9SF1-208ENST00000529332 ERICH3Q5RHP9 1530 aa24.44■■□□□ 1.5
TM9SF1-208ENST00000529332 PRXQ9BXM0 1461 aa24.43■■□□□ 1.5
TM9SF1-208ENST00000529332 ABCA5Q8WWZ7 1642 aa24.42■■□□□ 1.5
TM9SF1-208ENST00000529332 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
TM9SF1-208ENST00000529332 TNIKQ9UKE5 1360 aa24.39■■□□□ 1.49
TM9SF1-208ENST00000529332 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
TM9SF1-208ENST00000529332 IGF1RP08069 1367 aa24.38■■□□□ 1.49
TM9SF1-208ENST00000529332 CEP162Q5TB80 1403 aa24.37■■□□□ 1.49
TM9SF1-208ENST00000529332 UBTFP17480 764 aaKnown RBP24.37■■□□□ 1.49
TM9SF1-208ENST00000529332 CUL7Q14999 1698 aa24.35■■□□□ 1.49
TM9SF1-208ENST00000529332 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
TM9SF1-208ENST00000529332 TDRD9Q8NDG6 1382 aaKnown RBP24.32■■□□□ 1.48
TM9SF1-208ENST00000529332 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
TM9SF1-208ENST00000529332 PBRM1Q86U86 1689 aa24.28■■□□□ 1.48
TM9SF1-208ENST00000529332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.23■■□□□ 1.47
TM9SF1-208ENST00000529332 EIF4G3O43432 1585 aaKnown RBP24.19■■□□□ 1.46
TM9SF1-208ENST00000529332 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.46
TM9SF1-208ENST00000529332 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
TM9SF1-208ENST00000529332 GRIN2BQ13224 1484 aa24.18■■□□□ 1.46
TM9SF1-208ENST00000529332 TTBK1Q5TCY1 1321 aaPredicted RBP24.15■■□□□ 1.46
TM9SF1-208ENST00000529332 CCER1Q8TC90 406 aaPredicted RBP24.15■■□□□ 1.46
TM9SF1-208ENST00000529332 ADAMTS12P58397 1594 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms