RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-206ENST00000528748 KIAA1107Q9UPP5 1409 aa16.83■□□□□ 0.28
CDC27-206ENST00000528748 ARHGEF12Q9NZN5 1544 aa16.82■□□□□ 0.28
CDC27-206ENST00000528748 PLEKHH2Q8IVE3 1493 aa16.82■□□□□ 0.28
CDC27-206ENST00000528748 FGD6Q6ZV73 1430 aa16.82■□□□□ 0.28
CDC27-206ENST00000528748 AFAP1Q8N556 730 aa16.82■□□□□ 0.28
CDC27-206ENST00000528748 RSPH4AQ5TD94 716 aa16.81■□□□□ 0.28
CDC27-206ENST00000528748 ABCC1P33527 1531 aa16.8■□□□□ 0.28
CDC27-206ENST00000528748 CAMSAP2Q08AD1 1489 aa16.8■□□□□ 0.28
CDC27-206ENST00000528748 CLCN6P51797 869 aa16.79■□□□□ 0.28
CDC27-206ENST00000528748 MBD5Q9P267 1494 aa16.79■□□□□ 0.28
CDC27-206ENST00000528748 TRAPPC8Q9Y2L5 1435 aa16.79■□□□□ 0.28
CDC27-206ENST00000528748 PTPN23Q9H3S7 1636 aa16.78■□□□□ 0.28
CDC27-206ENST00000528748 ZNF579Q8NAF0 562 aaKnown RBP16.78■□□□□ 0.28
CDC27-206ENST00000528748 TCOF1Q13428 1488 aaKnown RBP16.78■□□□□ 0.28
CDC27-206ENST00000528748 FAM50AQ14320 339 aaKnown RBP16.77■□□□□ 0.28
CDC27-206ENST00000528748 POGZQ7Z3K3 1410 aa16.77■□□□□ 0.27
CDC27-206ENST00000528748 RICTORQ6R327 1708 aa16.76■□□□□ 0.27
CDC27-206ENST00000528748 SYCP2Q9BX26 1530 aa16.76■□□□□ 0.27
CDC27-206ENST00000528748 ZNF518AQ6AHZ1 1483 aa16.75■□□□□ 0.27
CDC27-206ENST00000528748 FRMPD1Q5SYB0 1578 aa16.74■□□□□ 0.27
CDC27-206ENST00000528748 GABBR2O75899 941 aa16.74■□□□□ 0.27
CDC27-206ENST00000528748 RRBP1Q9P2E9 1410 aaKnown RBP16.73■□□□□ 0.27
CDC27-206ENST00000528748 TSPY4P0CV99 314 aa16.73■□□□□ 0.27
CDC27-206ENST00000528748 TSPY10P0CW01 314 aa16.73■□□□□ 0.27
CDC27-206ENST00000528748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDC27-206ENST00000528748 MYT1LQ9UL68 1186 aa16.72■□□□□ 0.27
CDC27-206ENST00000528748 ARHGEF5Q12774 1597 aa16.72■□□□□ 0.27
CDC27-206ENST00000528748 SPAG9O60271 1321 aaKnown RBP16.71■□□□□ 0.27
CDC27-206ENST00000528748 TSPYL2Q9H2G4 693 aaPredicted RBP16.71■□□□□ 0.27
CDC27-206ENST00000528748 KDM5CP41229 1560 aa16.71■□□□□ 0.27
CDC27-206ENST00000528748 CCDC141Q6ZP82 1450 aa16.7■□□□□ 0.26
CDC27-206ENST00000528748 MAGI2Q86UL8 1455 aa16.7■□□□□ 0.26
CDC27-206ENST00000528748 MLH3Q9UHC1 1453 aa16.7■□□□□ 0.26
CDC27-206ENST00000528748 KLHL34Q8N239 644 aa16.7■□□□□ 0.26
CDC27-206ENST00000528748 ABCC5O15440 1437 aa16.7■□□□□ 0.26
CDC27-206ENST00000528748 ZMYM4Q5VZL5 1548 aa16.69■□□□□ 0.26
CDC27-206ENST00000528748 RASEFQ8IZ41 740 aa16.68■□□□□ 0.26
CDC27-206ENST00000528748 RTEL1-TNFRSF6BF6WH68 1400 aa16.67■□□□□ 0.26
CDC27-206ENST00000528748 DAPK1P53355 1430 aa16.67■□□□□ 0.26
CDC27-206ENST00000528748 NUBP1P53384 320 aa16.66■□□□□ 0.26
CDC27-206ENST00000528748 DNMT1P26358 1616 aaKnown RBP16.66■□□□□ 0.26
CDC27-206ENST00000528748 YEATS2Q9ULM3 1422 aa16.65■□□□□ 0.26
CDC27-206ENST00000528748 HECW2Q9P2P5 1572 aa16.64■□□□□ 0.25
CDC27-206ENST00000528748 KIDINS220Q9ULH0 1771 aa16.64■□□□□ 0.25
CDC27-206ENST00000528748 ITGAEP38570 1179 aa16.64■□□□□ 0.25
CDC27-206ENST00000528748 CHIC2Q9UKJ5 165 aa16.64■□□□□ 0.25
CDC27-206ENST00000528748 ZFYVE16Q7Z3T8 1539 aa16.63■□□□□ 0.25
CDC27-206ENST00000528748 PTPRKQ15262 1439 aa16.62■□□□□ 0.25
CDC27-206ENST00000528748 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
CDC27-206ENST00000528748 ATP10AO60312 1499 aa16.62■□□□□ 0.25
CDC27-206ENST00000528748 ATP7AQ04656 1500 aa16.62■□□□□ 0.25
CDC27-206ENST00000528748 PHF12Q96QT6 1004 aa16.62■□□□□ 0.25
CDC27-206ENST00000528748 MAST1Q9Y2H9 1570 aa16.62■□□□□ 0.25
CDC27-206ENST00000528748 INO80Q9ULG1 1556 aaPredicted RBP16.61■□□□□ 0.25
CDC27-206ENST00000528748 FAM212AQ96EL1 285 aa16.61■□□□□ 0.25
CDC27-206ENST00000528748 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
CDC27-206ENST00000528748 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
CDC27-206ENST00000528748 CROCC2H7BZ55 1655 aa16.59■□□□□ 0.25
CDC27-206ENST00000528748 RRP7BPQ9NSQ0 103 aa16.59■□□□□ 0.25
CDC27-206ENST00000528748 ARHGEF40Q8TER5 1519 aa16.59■□□□□ 0.25
CDC27-206ENST00000528748 ANKRD30AQ9BXX3 1397 aa16.58■□□□□ 0.24
CDC27-206ENST00000528748 NCOA1Q15788 1441 aa16.58■□□□□ 0.24
CDC27-206ENST00000528748 DIP2CQ9Y2E4 1556 aa16.58■□□□□ 0.24
CDC27-206ENST00000528748 ABCA6Q8N139 1617 aa16.58■□□□□ 0.24
CDC27-206ENST00000528748 DHX29Q7Z478 1369 aaKnown RBP16.57■□□□□ 0.24
CDC27-206ENST00000528748 IFNLR1Q8IU57 520 aaPredicted RBP16.57■□□□□ 0.24
CDC27-206ENST00000528748 ADGRL2O95490 1459 aa16.55■□□□□ 0.24
CDC27-206ENST00000528748 A2MP01023 1474 aa16.55■□□□□ 0.24
CDC27-206ENST00000528748 ROCK1Q13464 1354 aa16.55■□□□□ 0.24
CDC27-206ENST00000528748 ARID4BQ4LE39 1312 aaPredicted RBP16.54■□□□□ 0.24
CDC27-206ENST00000528748 ADGBQ8N7X0 1667 aa16.54■□□□□ 0.24
CDC27-206ENST00000528748 KIF15Q9NS87 1388 aa16.53■□□□□ 0.24
CDC27-206ENST00000528748 PLXNC1O60486 1568 aa16.53■□□□□ 0.24
CDC27-206ENST00000528748 REREQ9P2R6 1566 aa16.53■□□□□ 0.24
CDC27-206ENST00000528748 AGLP35573 1532 aa16.5■□□□□ 0.23
CDC27-206ENST00000528748 DUOX2Q9NRD8 1548 aa16.5■□□□□ 0.23
CDC27-206ENST00000528748 KIF3BO15066 747 aa16.5■□□□□ 0.23
CDC27-206ENST00000528748 GALR2O43603 387 aaPredicted RBP16.5■□□□□ 0.23
CDC27-206ENST00000528748 TRIM26Q12899 539 aaPredicted RBP16.5■□□□□ 0.23
CDC27-206ENST00000528748 DCAF8Q5TAQ9 597 aa16.5■□□□□ 0.23
CDC27-206ENST00000528748 SPOCK2Q92563 424 aa16.5■□□□□ 0.23
CDC27-206ENST00000528748 SIGLEC1Q9BZZ2 1709 aa16.5■□□□□ 0.23
CDC27-206ENST00000528748 MLECQ14165 292 aa16.48■□□□□ 0.23
CDC27-206ENST00000528748 KIF12Q96FN5 646 aa16.47■□□□□ 0.23
CDC27-206ENST00000528748 ERBINQ96RT1 1412 aa16.46■□□□□ 0.23
CDC27-206ENST00000528748 GGT6Q6P531 493 aa16.46■□□□□ 0.23
CDC27-206ENST00000528748 ANKRD50Q9ULJ7 1429 aa16.45■□□□□ 0.22
CDC27-206ENST00000528748 GSE1Q14687 1217 aa16.45■□□□□ 0.22
CDC27-206ENST00000528748 DCBLD2Q96PD2 775 aa16.45■□□□□ 0.22
CDC27-206ENST00000528748 NAIPQ13075 1403 aa16.45■□□□□ 0.22
CDC27-206ENST00000528748 HFM1A2PYH4 1435 aa16.44■□□□□ 0.22
CDC27-206ENST00000528748 MS4A3Q96HJ5 214 aa16.43■□□□□ 0.22
CDC27-206ENST00000528748 KDM4FA0A1W2PPD8 638 aa16.42■□□□□ 0.22
CDC27-206ENST00000528748 BCORL1Q5H9F3 1711 aa16.42■□□□□ 0.22
CDC27-206ENST00000528748 EIF2AK4Q9P2K8 1649 aaKnown RBP16.41■□□□□ 0.22
CDC27-206ENST00000528748 MAP3K13O43283 966 aa16.39■□□□□ 0.21
CDC27-206ENST00000528748 SETD5Q9C0A6 1442 aa16.38■□□□□ 0.21
CDC27-206ENST00000528748 ADAMTSL3P82987 1691 aa16.38■□□□□ 0.21
CDC27-206ENST00000528748 SGIP1Q9BQI5 828 aa16.38■□□□□ 0.21
CDC27-206ENST00000528748 GCC2Q8IWJ2 1684 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms