RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-206ENST00000528748 AEBP2Q6ZN18 517 aaPredicted RBP32.92■■■□□ 2.86
CDC27-206ENST00000528748 CHIC1Q5VXU3 224 aa31.85■■■□□ 2.69
CDC27-206ENST00000528748 SENP3Q9H4L4 574 aaPredicted RBP28.12■■■□□ 2.09
CDC27-206ENST00000528748 PHF23Q9BUL5 403 aaPredicted RBP27.89■■■□□ 2.06
CDC27-206ENST00000528748 FOXD1Q16676 465 aa26.06■■□□□ 1.76
CDC27-206ENST00000528748 NISCHQ9Y2I1 1504 aa26.02■■□□□ 1.76
CDC27-206ENST00000528748 PLPPR3Q6T4P5 718 aa25.73■■□□□ 1.71
CDC27-206ENST00000528748 PPP6R1Q9UPN7 881 aa24.73■■□□□ 1.55
CDC27-206ENST00000528748 ADRA2BP18089 450 aa24.7■■□□□ 1.54
CDC27-206ENST00000528748 PIAS4Q8N2W9 510 aaPredicted RBP24.54■■□□□ 1.52
CDC27-206ENST00000528748 MSH5O43196 834 aa24.29■■□□□ 1.48
CDC27-206ENST00000528748 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.26
CDC27-206ENST00000528748 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
CDC27-206ENST00000528748 POTEDQ86YR6 584 aa22.73■■□□□ 1.23
CDC27-206ENST00000528748 PPP4R3CPQ6ZMV5 832 aa22.58■■□□□ 1.21
CDC27-206ENST00000528748 MAPK8IP2Q13387 824 aaPredicted RBP22.51■■□□□ 1.19
CDC27-206ENST00000528748 DMRT2Q9Y5R5 561 aa22.35■■□□□ 1.17
CDC27-206ENST00000528748 ABCC9O60706 1549 aa22.25■■□□□ 1.15
CDC27-206ENST00000528748 CNKSR2Q8WXI2 1034 aa22.08■■□□□ 1.13
CDC27-206ENST00000528748 NCBP3Q53F19 620 aaKnown RBP21.95■■□□□ 1.1
CDC27-206ENST00000528748 HOXD11P31277 338 aaPredicted RBP21.74■■□□□ 1.07
CDC27-206ENST00000528748 RNF216Q9NWF9 866 aaPredicted RBP21.74■■□□□ 1.07
CDC27-206ENST00000528748 DCAF8L2P0C7V8 631 aa21.71■■□□□ 1.07
CDC27-206ENST00000528748 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
CDC27-206ENST00000528748 KCNA4P22459 653 aa21.57■■□□□ 1.04
CDC27-206ENST00000528748 NACADO15069 1562 aa21.56■■□□□ 1.04
CDC27-206ENST00000528748 NPM3O75607 178 aaKnown RBP21.54■■□□□ 1.04
CDC27-206ENST00000528748 DCAF1Q9Y4B6 1507 aa21.53■■□□□ 1.04
CDC27-206ENST00000528748 MYO15BQ96JP2 1530 aa21.52■■□□□ 1.04
CDC27-206ENST00000528748 RB1CC1Q8TDY2 1594 aa21.49■■□□□ 1.03
CDC27-206ENST00000528748 DCAF8L1A6NGE4 600 aa21.42■■□□□ 1.02
CDC27-206ENST00000528748 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
CDC27-206ENST00000528748 UNC13AQ9UPW8 1703 aa21.01■□□□□ 0.95
CDC27-206ENST00000528748 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
CDC27-206ENST00000528748 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.93
CDC27-206ENST00000528748 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
CDC27-206ENST00000528748 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.73■□□□□ 0.912e-6■■□□□ 14.1
CDC27-206ENST00000528748 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
CDC27-206ENST00000528748 RNF39Q9H2S5 420 aa20.72■□□□□ 0.91
CDC27-206ENST00000528748 SLC4A1APQ9BWU0 796 aaKnown RBP20.52■□□□□ 0.88
CDC27-206ENST00000528748 CACNB1Q02641 598 aaPredicted RBP20.49■□□□□ 0.87
CDC27-206ENST00000528748 C1QBPQ07021 282 aaKnown RBP20.49■□□□□ 0.87
CDC27-206ENST00000528748 SLC4A2P04920 1241 aa20.41■□□□□ 0.86
CDC27-206ENST00000528748 U3KPZ7 1027 aaPredicted RBP20.31■□□□□ 0.84
CDC27-206ENST00000528748 EIF4G1Q04637 1599 aaKnown RBP20.26■□□□□ 0.83
CDC27-206ENST00000528748 CECR2Q9BXF3 1484 aa20.25■□□□□ 0.83
CDC27-206ENST00000528748 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
CDC27-206ENST00000528748 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
CDC27-206ENST00000528748 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
CDC27-206ENST00000528748 MROH2BQ7Z745 1585 aa20.05■□□□□ 0.8
CDC27-206ENST00000528748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.04■□□□□ 0.8
CDC27-206ENST00000528748 HNRNPUL2Q1KMD3 747 aaKnown RBP20.04■□□□□ 0.8
CDC27-206ENST00000528748 FOXD4L1Q9NU39 408 aa20.03■□□□□ 0.8
CDC27-206ENST00000528748 MYCNP04198 464 aaPredicted RBP19.98■□□□□ 0.79
CDC27-206ENST00000528748 ATAD2BQ9ULI0 1458 aa19.96■□□□□ 0.79
CDC27-206ENST00000528748 APLP2Q06481 763 aa19.95■□□□□ 0.78
CDC27-206ENST00000528748 RSF1Q96T23 1441 aaPredicted RBP19.94■□□□□ 0.78
CDC27-206ENST00000528748 NCAPD3P42695 1498 aa19.92■□□□□ 0.78
CDC27-206ENST00000528748 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
CDC27-206ENST00000528748 SAMD1Q6SPF0 538 aaPredicted RBP19.91■□□□□ 0.78
CDC27-206ENST00000528748 PEG3Q9GZU2 1588 aa19.91■□□□□ 0.78
CDC27-206ENST00000528748 WIZO95785 1651 aa19.84■□□□□ 0.77
CDC27-206ENST00000528748 CAPN15O75808 1086 aa19.84■□□□□ 0.77
CDC27-206ENST00000528748 SPINK5Q9NQ38 1064 aaPredicted RBP19.84■□□□□ 0.77
CDC27-206ENST00000528748 ZBTB22O15209 634 aa19.8■□□□□ 0.76
CDC27-206ENST00000528748 HMGXB3Q12766 1538 aa19.78■□□□□ 0.76
CDC27-206ENST00000528748 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
CDC27-206ENST00000528748 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
CDC27-206ENST00000528748 ZNF219Q9P2Y4 722 aaPredicted RBP19.68■□□□□ 0.74
CDC27-206ENST00000528748 TRHP20396 242 aaPredicted RBP19.64■□□□□ 0.73
CDC27-206ENST00000528748 TOP2AP11388 1531 aaKnown RBP19.63■□□□□ 0.73
CDC27-206ENST00000528748 DSG3P32926 999 aa19.57■□□□□ 0.72
CDC27-206ENST00000528748 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
CDC27-206ENST00000528748 EHMT2Q96KQ7 1210 aa19.44■□□□□ 0.7
CDC27-206ENST00000528748 ATXN8OSP0DMR3 200 aa19.4■□□□□ 0.7
CDC27-206ENST00000528748 CSRNP3Q8WYN3 585 aa19.39■□□□□ 0.69
CDC27-206ENST00000528748 ABCB7O75027 752 aa19.38■□□□□ 0.69
CDC27-206ENST00000528748 CADPSQ9ULU8 1353 aa19.36■□□□□ 0.69
CDC27-206ENST00000528748 ATF5Q9Y2D1 282 aaPredicted RBP19.36■□□□□ 0.69
CDC27-206ENST00000528748 NESP48681 1621 aa19.34■□□□□ 0.69
CDC27-206ENST00000528748 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
CDC27-206ENST00000528748 CFTRP13569 1480 aa19.28■□□□□ 0.68
CDC27-206ENST00000528748 POLA2Q14181 598 aa19.22■□□□□ 0.67
CDC27-206ENST00000528748 PDS5BQ9NTI5 1447 aa19.2■□□□□ 0.66
CDC27-206ENST00000528748 ERCC6Q03468 1493 aa19.14■□□□□ 0.65
CDC27-206ENST00000528748 FANCD2Q9BXW9 1451 aa19.1■□□□□ 0.65
CDC27-206ENST00000528748 PRDM2Q13029 1718 aa19.09■□□□□ 0.65
CDC27-206ENST00000528748 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.64
CDC27-206ENST00000528748 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
CDC27-206ENST00000528748 ZBTB12Q9Y330 459 aaPredicted RBP18.97■□□□□ 0.63
CDC27-206ENST00000528748 MRC2Q9UBG0 1479 aa18.96■□□□□ 0.63
CDC27-206ENST00000528748 THOC2Q8NI27 1593 aaKnown RBP18.93■□□□□ 0.62
CDC27-206ENST00000528748 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
CDC27-206ENST00000528748 WDR62O43379 1518 aa18.87■□□□□ 0.61
CDC27-206ENST00000528748 ABCC8Q09428 1581 aa18.86■□□□□ 0.61
CDC27-206ENST00000528748 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
CDC27-206ENST00000528748 CUX2O14529 1486 aa18.84■□□□□ 0.61
CDC27-206ENST00000528748 DNMBPQ6XZF7 1577 aa18.81■□□□□ 0.6
CDC27-206ENST00000528748 CUX1P39880 1505 aa18.79■□□□□ 0.6
CDC27-206ENST00000528748 WRNQ14191 1432 aaPredicted RBP eCLIP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 645.7 ms