RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 PRG4Q92954 1404 aaPredicted RBP23.13■■□□□ 1.29
LTBP3-210ENST00000528516 FAM43AQ8N2R8 423 aa23.13■■□□□ 1.29
LTBP3-210ENST00000528516 HFM1A2PYH4 1435 aa23.1■■□□□ 1.29
LTBP3-210ENST00000528516 NCOA1Q15788 1441 aa23.1■■□□□ 1.29
LTBP3-210ENST00000528516 RNF123Q5XPI4 1314 aa23.1■■□□□ 1.29
LTBP3-210ENST00000528516 SAMD9Q5K651 1589 aa23.1■■□□□ 1.29
LTBP3-210ENST00000528516 U2SURPO15042 1029 aaKnown RBP23.09■■□□□ 1.29
LTBP3-210ENST00000528516 CRBNQ96SW2 442 aa23.09■■□□□ 1.29
LTBP3-210ENST00000528516 PNISRQ8TF01 805 aaKnown RBP23.09■■□□□ 1.29
LTBP3-210ENST00000528516 TMF1P82094 1093 aa23.07■■□□□ 1.28
LTBP3-210ENST00000528516 ROCK2O75116 1388 aaKnown RBP23.07■■□□□ 1.28
LTBP3-210ENST00000528516 GGT6Q6P531 493 aa23.07■■□□□ 1.28
LTBP3-210ENST00000528516 DISP1Q96F81 1524 aa23.07■■□□□ 1.28
LTBP3-210ENST00000528516 NAIPQ13075 1403 aa23.05■■□□□ 1.28
LTBP3-210ENST00000528516 ESF1Q9H501 851 aaKnown RBP23.05■■□□□ 1.28
LTBP3-210ENST00000528516 PTPRKQ15262 1439 aa23.05■■□□□ 1.28
LTBP3-210ENST00000528516 HECW1Q76N89 1606 aa23.05■■□□□ 1.28
LTBP3-210ENST00000528516 STK26Q9P289 416 aa23.04■■□□□ 1.28
LTBP3-210ENST00000528516 TPRNQ4KMQ1 711 aa23.04■■□□□ 1.28
LTBP3-210ENST00000528516 SLKQ9H2G2 1235 aaPredicted RBP23.04■■□□□ 1.28
LTBP3-210ENST00000528516 SOX12O15370 315 aa23.03■■□□□ 1.28
LTBP3-210ENST00000528516 CDCA7LQ96GN5 454 aa23.03■■□□□ 1.28
LTBP3-210ENST00000528516 UGGT2Q9NYU1 1516 aa23.03■■□□□ 1.28
LTBP3-210ENST00000528516 ARID4BQ4LE39 1312 aaPredicted RBP23.02■■□□□ 1.28
LTBP3-210ENST00000528516 CLUAP1Q96AJ1 413 aa23.02■■□□□ 1.28
LTBP3-210ENST00000528516 CFAP43Q8NDM7 1665 aa23.02■■□□□ 1.28
LTBP3-210ENST00000528516 CEP170Q5SW79 1584 aa23.02■■□□□ 1.28
LTBP3-210ENST00000528516 PNNQ9H307 717 aaKnown RBP23.02■■□□□ 1.27
LTBP3-210ENST00000528516 EHBP1L1Q8N3D4 1523 aa23.01■■□□□ 1.27
LTBP3-210ENST00000528516 HSP90AA2PQ14568 343 aaPredicted RBP23■■□□□ 1.27
LTBP3-210ENST00000528516 MAGI3Q5TCQ9 1506 aa22.98■■□□□ 1.27
LTBP3-210ENST00000528516 KIAA0556O60303 1618 aa22.98■■□□□ 1.27
LTBP3-210ENST00000528516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.98■■□□□ 1.27
LTBP3-210ENST00000528516 PANK3Q9H999 370 aa22.98■■□□□ 1.27
LTBP3-210ENST00000528516 NUP153P49790 1475 aaKnown RBP22.98■■□□□ 1.27
LTBP3-210ENST00000528516 ZBTB7CA1YPR0 619 aa22.98■■□□□ 1.27
LTBP3-210ENST00000528516 RRP7AQ9Y3A4 280 aaKnown RBP22.98■■□□□ 1.27
LTBP3-210ENST00000528516 SUPT6HQ7KZ85 1726 aaKnown RBP22.98■■□□□ 1.27
LTBP3-210ENST00000528516 FAM161AQ3B820 660 aa22.97■■□□□ 1.27
LTBP3-210ENST00000528516 FTSJ3Q8IY81 847 aaKnown RBP22.96■■□□□ 1.27
LTBP3-210ENST00000528516 L1TD1Q5T7N2 865 aaKnown RBP22.96■■□□□ 1.27
LTBP3-210ENST00000528516 BCL2L13Q9BXK5 485 aa22.96■■□□□ 1.27
LTBP3-210ENST00000528516 POGKQ9P215 609 aa22.96■■□□□ 1.27
LTBP3-210ENST00000528516 GZF1Q9H116 711 aaPredicted RBP22.95■■□□□ 1.26
LTBP3-210ENST00000528516 PTPN23Q9H3S7 1636 aa22.94■■□□□ 1.26
LTBP3-210ENST00000528516 MLECQ14165 292 aa22.94■■□□□ 1.26
LTBP3-210ENST00000528516 ZMYND15Q9H091 742 aa22.94■■□□□ 1.26
LTBP3-210ENST00000528516 KTN1Q86UP2 1357 aaKnown RBP22.94■■□□□ 1.26
LTBP3-210ENST00000528516 NUP160Q12769 1436 aa22.94■■□□□ 1.26
LTBP3-210ENST00000528516 USP47Q96K76 1375 aa22.92■■□□□ 1.26
LTBP3-210ENST00000528516 BECN1Q14457 450 aa22.91■■□□□ 1.26
LTBP3-210ENST00000528516 KIF3BO15066 747 aa22.9■■□□□ 1.26
LTBP3-210ENST00000528516 ANKRD30AQ9BXX3 1397 aa22.9■■□□□ 1.26
LTBP3-210ENST00000528516 MYBBP1AQ9BQG0 1328 aaKnown RBP22.9■■□□□ 1.26
LTBP3-210ENST00000528516 CDCA8Q53HL2 280 aa22.9■■□□□ 1.26
LTBP3-210ENST00000528516 PDE3BQ13370 1112 aa22.89■■□□□ 1.26
LTBP3-210ENST00000528516 NLRP13Q86W25 1043 aa22.89■■□□□ 1.26
LTBP3-210ENST00000528516 TROQ12816 1431 aaPredicted RBP22.89■■□□□ 1.26
LTBP3-210ENST00000528516 C14orf37Q86TY3 774 aa22.89■■□□□ 1.25
LTBP3-210ENST00000528516 MORC1Q86VD1 984 aa22.89■■□□□ 1.25
LTBP3-210ENST00000528516 RRAGDQ9NQL2 400 aaPredicted RBP22.88■■□□□ 1.25
LTBP3-210ENST00000528516 RAPGEF6Q8TEU7 1601 aa22.87■■□□□ 1.25
LTBP3-210ENST00000528516 SRPK2P78362 688 aaKnown RBP22.86■■□□□ 1.25
LTBP3-210ENST00000528516 CFAP53Q96M91 514 aa22.86■■□□□ 1.25
LTBP3-210ENST00000528516 RALBP1Q15311 655 aa22.86■■□□□ 1.25
LTBP3-210ENST00000528516 CENPQQ7L2Z9 268 aaPredicted RBP22.86■■□□□ 1.25
LTBP3-210ENST00000528516 KIF15Q9NS87 1388 aa22.85■■□□□ 1.25
LTBP3-210ENST00000528516 C20orf194Q5TEA3 1177 aa22.85■■□□□ 1.25
LTBP3-210ENST00000528516 TRAK1Q9UPV9 953 aa22.85■■□□□ 1.25
LTBP3-210ENST00000528516 APBB1O00213 710 aa22.84■■□□□ 1.25
LTBP3-210ENST00000528516 U2AF1L5P0DN76 240 aaPredicted RBP22.84■■□□□ 1.25
LTBP3-210ENST00000528516 U2AF1Q01081 240 aaKnown RBP eCLIP22.84■■□□□ 1.25
LTBP3-210ENST00000528516 NBPF1Q3BBV0 1214 aa22.83■■□□□ 1.25
LTBP3-210ENST00000528516 DHX29Q7Z478 1369 aaKnown RBP22.83■■□□□ 1.24
LTBP3-210ENST00000528516 GOLGA6L3A6NEY3 463 aa22.82■■□□□ 1.24
LTBP3-210ENST00000528516 LRRIQ1Q96JM4 1722 aa22.82■■□□□ 1.24
LTBP3-210ENST00000528516 KDM5BQ9UGL1 1544 aa22.81■■□□□ 1.24
LTBP3-210ENST00000528516 ATP10BO94823 1461 aa22.81■■□□□ 1.24
LTBP3-210ENST00000528516 OSCARQ8IYS5 282 aa22.8■■□□□ 1.24
LTBP3-210ENST00000528516 MIA2Q96PC5 1412 aa22.8■■□□□ 1.24
LTBP3-210ENST00000528516 MAPK8IP3Q9UPT6 1336 aa22.79■■□□□ 1.24
LTBP3-210ENST00000528516 ARHGEF11O15085 1522 aa22.79■■□□□ 1.24
LTBP3-210ENST00000528516 NCLP19338 710 aaKnown RBP22.79■■□□□ 1.24
LTBP3-210ENST00000528516 APAF1O14727 1248 aa22.78■■□□□ 1.24
LTBP3-210ENST00000528516 BRD4O60885 1362 aaPredicted RBP22.77■■□□□ 1.24
LTBP3-210ENST00000528516 TRIM44Q96DX7 344 aaPredicted RBP22.76■■□□□ 1.23
LTBP3-210ENST00000528516 GOLGA2Q08379 1002 aa22.76■■□□□ 1.23
LTBP3-210ENST00000528516 DAPK1P53355 1430 aa22.75■■□□□ 1.23
LTBP3-210ENST00000528516 NUTM2FA1L443 756 aa22.75■■□□□ 1.23
LTBP3-210ENST00000528516 ABCC5O15440 1437 aa22.74■■□□□ 1.23
LTBP3-210ENST00000528516 C8orf34Q49A92 452 aa22.74■■□□□ 1.23
LTBP3-210ENST00000528516 EFCAB2Q5VUJ9 269 aa22.73■■□□□ 1.23
LTBP3-210ENST00000528516 ELL2O00472 640 aaPredicted RBP22.72■■□□□ 1.23
LTBP3-210ENST00000528516 GPATCH8Q9UKJ3 1502 aaKnown RBP22.71■■□□□ 1.23
LTBP3-210ENST00000528516 MYH16Q9H6N6 1097 aa22.7■■□□□ 1.22
LTBP3-210ENST00000528516 COG6Q9Y2V7 657 aa22.7■■□□□ 1.22
LTBP3-210ENST00000528516 RRP9O43818 475 aaKnown RBP22.7■■□□□ 1.22
LTBP3-210ENST00000528516 ANKRD30BQ9BXX2 1392 aa22.7■■□□□ 1.22
LTBP3-210ENST00000528516 CHD1O14646 1710 aa22.69■■□□□ 1.22
LTBP3-210ENST00000528516 ANP32BQ92688 251 aaKnown RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms