RNA–Protein interactions for RNA: ENST00000527663.5

PPP1CA-205, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-205ENST00000527663 MED14O60244 1454 aa16.54■□□□□ 0.24
PPP1CA-205ENST00000527663 PLEKHH2Q8IVE3 1493 aa16.54■□□□□ 0.24
PPP1CA-205ENST00000527663 LRRC7Q96NW7 1537 aa16.54■□□□□ 0.24
PPP1CA-205ENST00000527663 FAM135AQ9P2D6 1515 aa16.53■□□□□ 0.24
PPP1CA-205ENST00000527663 CFDP1Q9UEE9 299 aaPredicted RBP16.52■□□□□ 0.24
PPP1CA-205ENST00000527663 RNF17Q9BXT8 1623 aaKnown RBP16.52■□□□□ 0.23
PPP1CA-205ENST00000527663 INO80Q9ULG1 1556 aaPredicted RBP16.51■□□□□ 0.23
PPP1CA-205ENST00000527663 PZPP20742 1482 aa16.51■□□□□ 0.23
PPP1CA-205ENST00000527663 NLRP1Q9C000 1473 aa16.51■□□□□ 0.23
PPP1CA-205ENST00000527663 GPATCH8Q9UKJ3 1502 aaKnown RBP16.5■□□□□ 0.23
PPP1CA-205ENST00000527663 EHMT2Q96KQ7 1210 aa16.5■□□□□ 0.23
PPP1CA-205ENST00000527663 CDC42BPAQ5VT25 1732 aa16.5■□□□□ 0.23
PPP1CA-205ENST00000527663 DEPDC5O75140 1603 aa16.49■□□□□ 0.23
PPP1CA-205ENST00000527663 CASKIN1Q8WXD9 1431 aa16.49■□□□□ 0.23
PPP1CA-205ENST00000527663 MIA2Q96PC5 1412 aa16.49■□□□□ 0.23
PPP1CA-205ENST00000527663 UGGT1Q9NYU2 1555 aa16.48■□□□□ 0.23
PPP1CA-205ENST00000527663 WASHC2CQ9Y4E1 1318 aa16.47■□□□□ 0.23
PPP1CA-205ENST00000527663 SYNMO15061 1565 aa16.47■□□□□ 0.23
PPP1CA-205ENST00000527663 KIF3BO15066 747 aa16.46■□□□□ 0.23
PPP1CA-205ENST00000527663 DHX29Q7Z478 1369 aaKnown RBP16.46■□□□□ 0.23
PPP1CA-205ENST00000527663 LRRIQ1Q96JM4 1722 aa16.45■□□□□ 0.22
PPP1CA-205ENST00000527663 KDM5DQ9BY66 1539 aa16.45■□□□□ 0.22
PPP1CA-205ENST00000527663 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
PPP1CA-205ENST00000527663 IQGAP1P46940 1657 aa16.44■□□□□ 0.22
PPP1CA-205ENST00000527663 ADGBQ8N7X0 1667 aa16.44■□□□□ 0.22
PPP1CA-205ENST00000527663 CCNB3Q8WWL7 1395 aa16.44■□□□□ 0.22
PPP1CA-205ENST00000527663 RTEL1-TNFRSF6BF6WH68 1400 aa16.43■□□□□ 0.22
PPP1CA-205ENST00000527663 SRCAPQ6ZRS2 3230 aa16.42■□□□□ 0.22
PPP1CA-205ENST00000527663 STRCP1A6NGW2 1772 aa16.38■□□□□ 0.21
PPP1CA-205ENST00000527663 FYCO1Q9BQS8 1478 aa16.37■□□□□ 0.21
PPP1CA-205ENST00000527663 UPF1Q92900 1129 aaKnown RBP eCLIP16.37■□□□□ 0.21
PPP1CA-205ENST00000527663 ZNF644Q9H582 1327 aaPredicted RBP16.36■□□□□ 0.21
PPP1CA-205ENST00000527663 MBD5Q9P267 1494 aa16.35■□□□□ 0.21
PPP1CA-205ENST00000527663 SCAF11Q99590 1463 aaKnown RBP16.35■□□□□ 0.21
PPP1CA-205ENST00000527663 SETD1AO15047 1707 aaKnown RBP16.32■□□□□ 0.2
PPP1CA-205ENST00000527663 MTUS2Q5JR59 1369 aa16.32■□□□□ 0.2
PPP1CA-205ENST00000527663 TXNDC2Q86VQ3 553 aa16.32■□□□□ 0.2
PPP1CA-205ENST00000527663 CHIC1Q5VXU3 224 aa16.31■□□□□ 0.2
PPP1CA-205ENST00000527663 EID1Q9Y6B2 187 aa16.31■□□□□ 0.2
PPP1CA-205ENST00000527663 TMEM94Q12767 1356 aa16.3■□□□□ 0.2
PPP1CA-205ENST00000527663 JCADQ9P266 1359 aa16.3■□□□□ 0.2
PPP1CA-205ENST00000527663 RSPH4AQ5TD94 716 aa16.3■□□□□ 0.2
PPP1CA-205ENST00000527663 LTKP29376 864 aa16.29■□□□□ 0.2
PPP1CA-205ENST00000527663 ZNF772Q68DY9 489 aaPredicted RBP16.29■□□□□ 0.2
PPP1CA-205ENST00000527663 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
PPP1CA-205ENST00000527663 ZC3H13Q5T200 1668 aaKnown RBP16.28■□□□□ 0.2
PPP1CA-205ENST00000527663 TRIM52Q96A61 297 aa16.28■□□□□ 0.2
PPP1CA-205ENST00000527663 ERVK-7P63135 1459 aa16.28■□□□□ 0.2
PPP1CA-205ENST00000527663 CCDC141Q6ZP82 1450 aa16.27■□□□□ 0.19
PPP1CA-205ENST00000527663 MEX3CQ5U5Q3 659 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-205ENST00000527663 ROBO1Q9Y6N7 1651 aa16.25■□□□□ 0.19
PPP1CA-205ENST00000527663 PROSER2Q86WR7 435 aaPredicted RBP16.25■□□□□ 0.19
PPP1CA-205ENST00000527663 ARHGAP23Q9P227 1491 aa16.24■□□□□ 0.19
PPP1CA-205ENST00000527663 KCNA6P17658 529 aa16.24■□□□□ 0.19
PPP1CA-205ENST00000527663 ABCC3O15438 1527 aa16.24■□□□□ 0.19
PPP1CA-205ENST00000527663 SLIT1O75093 1534 aa16.24■□□□□ 0.19
PPP1CA-205ENST00000527663 NCOA2Q15596 1464 aa16.23■□□□□ 0.19
PPP1CA-205ENST00000527663 TSPY4P0CV99 314 aa16.23■□□□□ 0.19
PPP1CA-205ENST00000527663 TSPY10P0CW01 314 aa16.23■□□□□ 0.19
PPP1CA-205ENST00000527663 SPATA31A6Q5VVP1 1343 aa16.22■□□□□ 0.19
PPP1CA-205ENST00000527663 RXRBP28702 533 aa16.22■□□□□ 0.19
PPP1CA-205ENST00000527663 SLAIN2Q9P270 581 aa16.22■□□□□ 0.19
PPP1CA-205ENST00000527663 MSH6P52701 1360 aa16.22■□□□□ 0.19
PPP1CA-205ENST00000527663 XIRP1Q702N8 1843 aaKnown RBP16.22■□□□□ 0.19
PPP1CA-205ENST00000527663 TIAM1Q13009 1591 aa16.21■□□□□ 0.19
PPP1CA-205ENST00000527663 UBR1Q8IWV7 1749 aa16.19■□□□□ 0.18
PPP1CA-205ENST00000527663 TMEM2Q9UHN6 1383 aa16.19■□□□□ 0.18
PPP1CA-205ENST00000527663 RBM33Q96EV2 1170 aaKnown RBP16.19■□□□□ 0.18
PPP1CA-205ENST00000527663 MAP3K1Q13233 1512 aa16.19■□□□□ 0.18
PPP1CA-205ENST00000527663 STAG3Q9UJ98 1225 aa16.18■□□□□ 0.18
PPP1CA-205ENST00000527663 CEP162Q5TB80 1403 aa16.18■□□□□ 0.18
PPP1CA-205ENST00000527663 FGD6Q6ZV73 1430 aa16.18■□□□□ 0.18
PPP1CA-205ENST00000527663 CDK12Q9NYV4 1490 aaPredicted RBP16.16■□□□□ 0.18
PPP1CA-205ENST00000527663 PRDM15P57071 1507 aaPredicted RBP16.16■□□□□ 0.18
PPP1CA-205ENST00000527663 NKTRP30414 1462 aaKnown RBP16.16■□□□□ 0.18
PPP1CA-205ENST00000527663 CAMSAP2Q08AD1 1489 aa16.16■□□□□ 0.18
PPP1CA-205ENST00000527663 EHBP1L1Q8N3D4 1523 aa16.15■□□□□ 0.18
PPP1CA-205ENST00000527663 PHLPP1O60346 1717 aa16.15■□□□□ 0.18
PPP1CA-205ENST00000527663 SLC26A8Q96RN1 970 aa16.15■□□□□ 0.18
PPP1CA-205ENST00000527663 LRP6O75581 1613 aa16.15■□□□□ 0.18
PPP1CA-205ENST00000527663 FOXD1Q16676 465 aa16.13■□□□□ 0.17
PPP1CA-205ENST00000527663 ARHGAP31Q2M1Z3 1444 aa16.11■□□□□ 0.17
PPP1CA-205ENST00000527663 ARHGEF5Q12774 1597 aa16.1■□□□□ 0.17
PPP1CA-205ENST00000527663 COL16A1Q07092 1604 aaPredicted RBP16.1■□□□□ 0.17
PPP1CA-205ENST00000527663 BCANQ96GW7 911 aa16.09■□□□□ 0.17
PPP1CA-205ENST00000527663 EIF2AK4Q9P2K8 1649 aaKnown RBP16.08■□□□□ 0.16
PPP1CA-205ENST00000527663 EFCAB6Q5THR3 1501 aa16.07■□□□□ 0.16
PPP1CA-205ENST00000527663 TET3O43151 1660 aa16.06■□□□□ 0.16
PPP1CA-205ENST00000527663 MROH1Q8NDA8 1641 aa16.06■□□□□ 0.16
PPP1CA-205ENST00000527663 NWD1Q149M9 1564 aa16.06■□□□□ 0.16
PPP1CA-205ENST00000527663 AFF2P51816 1311 aa16.06■□□□□ 0.16
PPP1CA-205ENST00000527663 NUTM2BA6NNL0 878 aaPredicted RBP16.06■□□□□ 0.16
PPP1CA-205ENST00000527663 NUTM2EB1AL46 878 aaPredicted RBP16.06■□□□□ 0.16
PPP1CA-205ENST00000527663 C14orf37Q86TY3 774 aa16.06■□□□□ 0.16
PPP1CA-205ENST00000527663 NUTM2AQ8IVF1 878 aaPredicted RBP16.06■□□□□ 0.16
PPP1CA-205ENST00000527663 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
PPP1CA-205ENST00000527663 NUTM2DQ5VT03 806 aaPredicted RBP16.05■□□□□ 0.16
PPP1CA-205ENST00000527663 CADPS2Q86UW7 1296 aa16.05■□□□□ 0.16
PPP1CA-205ENST00000527663 NCOA3Q9Y6Q9 1424 aa16.04■□□□□ 0.16
PPP1CA-205ENST00000527663 RBM6P78332 1123 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms