RNA–Protein interactions for RNA: ENST00000527663.5

PPP1CA-205, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-205ENST00000527663 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
PPP1CA-205ENST00000527663 ABCC9O60706 1549 aa24.13■■□□□ 1.45
PPP1CA-205ENST00000527663 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
PPP1CA-205ENST00000527663 DNAJC5BQ9UF47 199 aa23.25■■□□□ 1.31
PPP1CA-205ENST00000527663 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
PPP1CA-205ENST00000527663 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.17
PPP1CA-205ENST00000527663 NACADO15069 1562 aa22.34■■□□□ 1.17
PPP1CA-205ENST00000527663 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
PPP1CA-205ENST00000527663 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.11
PPP1CA-205ENST00000527663 UNC13AQ9UPW8 1703 aa21.94■■□□□ 1.1
PPP1CA-205ENST00000527663 DNAJC5Q9H3Z4 198 aa21.93■■□□□ 1.1
PPP1CA-205ENST00000527663 CECR2Q9BXF3 1484 aa21.84■■□□□ 1.09
PPP1CA-205ENST00000527663 MYO15BQ96JP2 1530 aa21.83■■□□□ 1.09
PPP1CA-205ENST00000527663 SHROOM4Q9ULL8 1493 aa21.71■■□□□ 1.07
PPP1CA-205ENST00000527663 CC2D2AQ9P2K1 1620 aa21.71■■□□□ 1.07
PPP1CA-205ENST00000527663 EIF4G1Q04637 1599 aaKnown RBP21.52■■□□□ 1.04
PPP1CA-205ENST00000527663 SCRIBQ14160 1630 aa21.27■■□□□ 1
PPP1CA-205ENST00000527663 DCAF1Q9Y4B6 1507 aa21.27■■□□□ 1
PPP1CA-205ENST00000527663 ZCCHC6Q5VYS8 1495 aaKnown RBP21.22■□□□□ 0.99
PPP1CA-205ENST00000527663 CUX2O14529 1486 aa21.13■□□□□ 0.97
PPP1CA-205ENST00000527663 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
PPP1CA-205ENST00000527663 TRIM41Q8WV44 630 aa20.68■□□□□ 0.9
PPP1CA-205ENST00000527663 NCAPD3P42695 1498 aa20.67■□□□□ 0.9
PPP1CA-205ENST00000527663 NESP48681 1621 aa20.49■□□□□ 0.87
PPP1CA-205ENST00000527663 ATAD2BQ9ULI0 1458 aa20.48■□□□□ 0.87
PPP1CA-205ENST00000527663 HMGXB3Q12766 1538 aa20.41■□□□□ 0.86
PPP1CA-205ENST00000527663 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
PPP1CA-205ENST00000527663 THOC2Q8NI27 1593 aaKnown RBP20.39■□□□□ 0.85
PPP1CA-205ENST00000527663 LAMC3Q9Y6N6 1575 aa20.26■□□□□ 0.83
PPP1CA-205ENST00000527663 BAZ1BQ9UIG0 1483 aaKnown RBP20.26■□□□□ 0.83
PPP1CA-205ENST00000527663 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
PPP1CA-205ENST00000527663 SMARCA4P51532 1647 aa20.22■□□□□ 0.83
PPP1CA-205ENST00000527663 KIF21AQ7Z4S6 1674 aa20.12■□□□□ 0.81
PPP1CA-205ENST00000527663 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
PPP1CA-205ENST00000527663 BAZ1AQ9NRL2 1556 aaPredicted RBP20.08■□□□□ 0.8
PPP1CA-205ENST00000527663 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
PPP1CA-205ENST00000527663 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
PPP1CA-205ENST00000527663 CADPSQ9ULU8 1353 aa20.02■□□□□ 0.8
PPP1CA-205ENST00000527663 WDR62O43379 1518 aa20.02■□□□□ 0.79
PPP1CA-205ENST00000527663 CEP164Q9UPV0 1460 aa19.86■□□□□ 0.77
PPP1CA-205ENST00000527663 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.77
PPP1CA-205ENST00000527663 FANCD2Q9BXW9 1451 aa19.77■□□□□ 0.76
PPP1CA-205ENST00000527663 RIMBP3CA6NJZ7 1639 aa19.76■□□□□ 0.75
PPP1CA-205ENST00000527663 RIMBP3BA6NNM3 1639 aa19.76■□□□□ 0.75
PPP1CA-205ENST00000527663 RIMBP3Q9UFD9 1639 aa19.76■□□□□ 0.75
PPP1CA-205ENST00000527663 TRHP20396 242 aaPredicted RBP19.69■□□□□ 0.74
PPP1CA-205ENST00000527663 ARHGEF11O15085 1522 aa19.69■□□□□ 0.74
PPP1CA-205ENST00000527663 CYB5RLQ6IPT4 315 aa19.66■□□□□ 0.74
PPP1CA-205ENST00000527663 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
PPP1CA-205ENST00000527663 CFTRP13569 1480 aa19.62■□□□□ 0.73
PPP1CA-205ENST00000527663 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
PPP1CA-205ENST00000527663 WIZO95785 1651 aa19.5■□□□□ 0.71
PPP1CA-205ENST00000527663 IFT140Q96RY7 1462 aa19.5■□□□□ 0.71
PPP1CA-205ENST00000527663 ZNF608Q9ULD9 1512 aaPredicted RBP19.49■□□□□ 0.71
PPP1CA-205ENST00000527663 ARAP1Q96P48 1450 aa19.44■□□□□ 0.7
PPP1CA-205ENST00000527663 RSF1Q96T23 1441 aaPredicted RBP19.39■□□□□ 0.69
PPP1CA-205ENST00000527663 FBLN2P98095 1184 aa19.33■□□□□ 0.68
PPP1CA-205ENST00000527663 EIF4G3O43432 1585 aaKnown RBP19.3■□□□□ 0.68
PPP1CA-205ENST00000527663 TOPBP1Q92547 1522 aa19.29■□□□□ 0.68
PPP1CA-205ENST00000527663 TOP2AP11388 1531 aaKnown RBP19.28■□□□□ 0.68
PPP1CA-205ENST00000527663 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
PPP1CA-205ENST00000527663 AQRO60306 1485 aaKnown RBP eCLIP19.25■□□□□ 0.677e-8■■■■■ 41.6
PPP1CA-205ENST00000527663 CHD1O14646 1710 aa19.22■□□□□ 0.67
PPP1CA-205ENST00000527663 PRDM2Q13029 1718 aa19.18■□□□□ 0.66
PPP1CA-205ENST00000527663 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.65
PPP1CA-205ENST00000527663 TARBP1Q13395 1621 aaKnown RBP19.11■□□□□ 0.65
PPP1CA-205ENST00000527663 CHMP7Q8WUX9 453 aaPredicted RBP19.09■□□□□ 0.65
PPP1CA-205ENST00000527663 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
PPP1CA-205ENST00000527663 CLASP1Q7Z460 1538 aa19.07■□□□□ 0.64
PPP1CA-205ENST00000527663 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
PPP1CA-205ENST00000527663 TDRD9Q8NDG6 1382 aaKnown RBP19.05■□□□□ 0.64
PPP1CA-205ENST00000527663 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
PPP1CA-205ENST00000527663 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
PPP1CA-205ENST00000527663 SOGA1O94964 1423 aa19■□□□□ 0.63
PPP1CA-205ENST00000527663 GAPVD1Q14C86 1478 aa18.99■□□□□ 0.63
PPP1CA-205ENST00000527663 RAD54L2Q9Y4B4 1467 aa18.99■□□□□ 0.63
PPP1CA-205ENST00000527663 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
PPP1CA-205ENST00000527663 WDR97A6NE52 1622 aa18.93■□□□□ 0.62
PPP1CA-205ENST00000527663 SYNJ2O15056 1496 aa18.92■□□□□ 0.62
PPP1CA-205ENST00000527663 GRIN2BQ13224 1484 aa18.91■□□□□ 0.62
PPP1CA-205ENST00000527663 ILDR1Q86SU0 546 aaPredicted RBP18.83■□□□□ 0.6
PPP1CA-205ENST00000527663 FGD5Q6ZNL6 1462 aa18.83■□□□□ 0.6
PPP1CA-205ENST00000527663 ERCC6L2Q5T890 1561 aa18.69■□□□□ 0.58
PPP1CA-205ENST00000527663 CUX1P39880 1505 aa18.68■□□□□ 0.58
PPP1CA-205ENST00000527663 KDM4FA0A1W2PPD8 638 aa18.66■□□□□ 0.58
PPP1CA-205ENST00000527663 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
PPP1CA-205ENST00000527663 FAM69CQ0P6D2 419 aa18.64■□□□□ 0.57
PPP1CA-205ENST00000527663 CEP170Q5SW79 1584 aa18.64■□□□□ 0.57
PPP1CA-205ENST00000527663 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
PPP1CA-205ENST00000527663 NUP160Q12769 1436 aa18.61■□□□□ 0.57
PPP1CA-205ENST00000527663 KIF13AQ9H1H9 1805 aa18.6■□□□□ 0.57
PPP1CA-205ENST00000527663 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
PPP1CA-205ENST00000527663 ABCC10Q5T3U5 1492 aa18.58■□□□□ 0.56
PPP1CA-205ENST00000527663 NPM1P06748 294 aaKnown RBP eCLIP18.57■□□□□ 0.56
PPP1CA-205ENST00000527663 ABCA5Q8WWZ7 1642 aa18.56■□□□□ 0.56
PPP1CA-205ENST00000527663 SHROOM2Q13796 1616 aa18.53■□□□□ 0.56
PPP1CA-205ENST00000527663 PRG4Q92954 1404 aaPredicted RBP18.51■□□□□ 0.55
PPP1CA-205ENST00000527663 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
PPP1CA-205ENST00000527663 ADAMTS12P58397 1594 aa18.49■□□□□ 0.55
PPP1CA-205ENST00000527663 KDM6BO15054 1643 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms