RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SPAG9O60271 1321 aaKnown RBP16.92■□□□□ 0.3
CAPN1-208ENST00000527323 AKNAQ7Z591 1439 aa16.92■□□□□ 0.3
CAPN1-208ENST00000527323 UHRF1BP1LA0JNW5 1464 aa16.91■□□□□ 0.3
CAPN1-208ENST00000527323 SCAPERQ9BY12 1400 aa16.91■□□□□ 0.3
CAPN1-208ENST00000527323 KCNA4P22459 653 aa16.91■□□□□ 0.3
CAPN1-208ENST00000527323 MBD5Q9P267 1494 aa16.91■□□□□ 0.3
CAPN1-208ENST00000527323 PLCH2O75038 1416 aa16.91■□□□□ 0.3
CAPN1-208ENST00000527323 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
CAPN1-208ENST00000527323 RGL3Q3MIN7 710 aa16.9■□□□□ 0.3
CAPN1-208ENST00000527323 KDM2AQ9Y2K7 1162 aa16.9■□□□□ 0.3
CAPN1-208ENST00000527323 ANKRD50Q9ULJ7 1429 aa16.9■□□□□ 0.3
CAPN1-208ENST00000527323 DNMT1P26358 1616 aaKnown RBP16.9■□□□□ 0.3
CAPN1-208ENST00000527323 CCDC136Q96JN2 1154 aa16.9■□□□□ 0.3
CAPN1-208ENST00000527323 ITSN2Q9NZM3 1697 aa16.89■□□□□ 0.29
CAPN1-208ENST00000527323 CD109Q6YHK3 1445 aa16.89■□□□□ 0.29
CAPN1-208ENST00000527323 FANCAO15360 1455 aa16.89■□□□□ 0.29
CAPN1-208ENST00000527323 KIF3BO15066 747 aa16.88■□□□□ 0.29
CAPN1-208ENST00000527323 GGT6Q6P531 493 aa16.88■□□□□ 0.29
CAPN1-208ENST00000527323 GCC2Q8IWJ2 1684 aa16.87■□□□□ 0.29
CAPN1-208ENST00000527323 RPRD2Q5VT52 1461 aaKnown RBP16.87■□□□□ 0.29
CAPN1-208ENST00000527323 NOP58Q9Y2X3 529 aaKnown RBP16.87■□□□□ 0.29
CAPN1-208ENST00000527323 NBR1Q14596 966 aa16.86■□□□□ 0.29
CAPN1-208ENST00000527323 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
CAPN1-208ENST00000527323 TSPOAP1O95153 1857 aa16.85■□□□□ 0.29
CAPN1-208ENST00000527323 PLEKHH2Q8IVE3 1493 aa16.85■□□□□ 0.29
CAPN1-208ENST00000527323 MLECQ14165 292 aa16.85■□□□□ 0.29
CAPN1-208ENST00000527323 PREX2Q70Z35 1606 aa16.85■□□□□ 0.29
CAPN1-208ENST00000527323 DEKP35659 375 aaKnown RBP16.84■□□□□ 0.29
CAPN1-208ENST00000527323 MYO5CQ9NQX4 1742 aa16.84■□□□□ 0.29
CAPN1-208ENST00000527323 TMC1Q8TDI8 760 aa16.84■□□□□ 0.29
CAPN1-208ENST00000527323 CCDC141Q6ZP82 1450 aa16.84■□□□□ 0.29
CAPN1-208ENST00000527323 SPATA31E1Q6ZUB1 1445 aa16.83■□□□□ 0.28
CAPN1-208ENST00000527323 ADGRL1O94910 1474 aa16.83■□□□□ 0.28
CAPN1-208ENST00000527323 ROCK1Q13464 1354 aa16.82■□□□□ 0.28
CAPN1-208ENST00000527323 SMG6Q86US8 1419 aaKnown RBP16.82■□□□□ 0.28
CAPN1-208ENST00000527323 ANP32AP39687 249 aaKnown RBP16.81■□□□□ 0.28
CAPN1-208ENST00000527323 TEX14Q8IWB6 1497 aa16.81■□□□□ 0.28
CAPN1-208ENST00000527323 PAK3O75914 559 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-208ENST00000527323 USP47Q96K76 1375 aa16.79■□□□□ 0.28
CAPN1-208ENST00000527323 DHX29Q7Z478 1369 aaKnown RBP16.77■□□□□ 0.27
CAPN1-208ENST00000527323 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-208ENST00000527323 PNISRQ8TF01 805 aaKnown RBP16.75■□□□□ 0.27
CAPN1-208ENST00000527323 CARD11Q9BXL7 1154 aa16.75■□□□□ 0.27
CAPN1-208ENST00000527323 PZPP20742 1482 aa16.75■□□□□ 0.27
CAPN1-208ENST00000527323 CHGAP10645 457 aaKnown RBP16.74■□□□□ 0.27
CAPN1-208ENST00000527323 SALL2Q9Y467 1007 aaPredicted RBP16.74■□□□□ 0.27
CAPN1-208ENST00000527323 RSPH4AQ5TD94 716 aa16.73■□□□□ 0.27
CAPN1-208ENST00000527323 IPO9Q96P70 1041 aaKnown RBP16.73■□□□□ 0.27
CAPN1-208ENST00000527323 NUTM2DQ5VT03 806 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-208ENST00000527323 CFAP65Q6ZU64 1925 aaKnown RBP16.73■□□□□ 0.27
CAPN1-208ENST00000527323 DCAF11Q8TEB1 546 aa16.72■□□□□ 0.27
CAPN1-208ENST00000527323 RNF123Q5XPI4 1314 aa16.72■□□□□ 0.27
CAPN1-208ENST00000527323 RTL5Q5HYW3 569 aaPredicted RBP16.71■□□□□ 0.27
CAPN1-208ENST00000527323 ABCC1P33527 1531 aa16.71■□□□□ 0.27
CAPN1-208ENST00000527323 CROCC2H7BZ55 1655 aa16.7■□□□□ 0.26
CAPN1-208ENST00000527323 NPM2Q86SE8 214 aaKnown RBP16.7■□□□□ 0.26
CAPN1-208ENST00000527323 ARID4BQ4LE39 1312 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-208ENST00000527323 KIAA1107Q9UPP5 1409 aa16.69■□□□□ 0.26
CAPN1-208ENST00000527323 ABCA9Q8IUA7 1624 aa16.68■□□□□ 0.26
CAPN1-208ENST00000527323 ADGRL2O95490 1459 aa16.68■□□□□ 0.26
CAPN1-208ENST00000527323 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
CAPN1-208ENST00000527323 ROCK2O75116 1388 aaKnown RBP16.67■□□□□ 0.26
CAPN1-208ENST00000527323 YEATS2Q9ULM3 1422 aa16.66■□□□□ 0.26
CAPN1-208ENST00000527323 ADGBQ8N7X0 1667 aa16.66■□□□□ 0.26
CAPN1-208ENST00000527323 ARHGEF5Q12774 1597 aa16.65■□□□□ 0.26
CAPN1-208ENST00000527323 EXOC6Q8TAG9 804 aa16.65■□□□□ 0.26
CAPN1-208ENST00000527323 RALBP1Q15311 655 aa16.64■□□□□ 0.25
CAPN1-208ENST00000527323 MYBBP1AQ9BQG0 1328 aaKnown RBP16.63■□□□□ 0.25
CAPN1-208ENST00000527323 RRP1P56182 461 aaKnown RBP16.63■□□□□ 0.25
CAPN1-208ENST00000527323 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
CAPN1-208ENST00000527323 SHANK2Q9UPX8 1470 aa16.63■□□□□ 0.25
CAPN1-208ENST00000527323 WASHC2CQ9Y4E1 1318 aa16.62■□□□□ 0.25
CAPN1-208ENST00000527323 BCORL1Q5H9F3 1711 aa16.62■□□□□ 0.25
CAPN1-208ENST00000527323 COL17A1Q9UMD9 1497 aaPredicted RBP16.61■□□□□ 0.25
CAPN1-208ENST00000527323 ATP7AQ04656 1500 aa16.61■□□□□ 0.25
CAPN1-208ENST00000527323 FAM135AQ9P2D6 1515 aa16.6■□□□□ 0.25
CAPN1-208ENST00000527323 POLR1AO95602 1720 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-208ENST00000527323 BRD4O60885 1362 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-208ENST00000527323 ZFYVE16Q7Z3T8 1539 aa16.59■□□□□ 0.25
CAPN1-208ENST00000527323 TCERG1O14776 1098 aaKnown RBP16.58■□□□□ 0.24
CAPN1-208ENST00000527323 NBPF1Q3BBV0 1214 aa16.58■□□□□ 0.24
CAPN1-208ENST00000527323 FBXO31Q5XUX0 539 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-208ENST00000527323 POGZQ7Z3K3 1410 aa16.57■□□□□ 0.24
CAPN1-208ENST00000527323 ZNF518AQ6AHZ1 1483 aa16.57■□□□□ 0.24
CAPN1-208ENST00000527323 PDE4AP27815 886 aa16.56■□□□□ 0.24
CAPN1-208ENST00000527323 NLRP13Q86W25 1043 aa16.56■□□□□ 0.24
CAPN1-208ENST00000527323 LRPPRCP42704 1394 aaKnown RBP16.56■□□□□ 0.24
CAPN1-208ENST00000527323 KDM5CP41229 1560 aa16.55■□□□□ 0.24
CAPN1-208ENST00000527323 DIP2BQ9P265 1576 aa16.55■□□□□ 0.24
CAPN1-208ENST00000527323 DUOX2Q9NRD8 1548 aa16.55■□□□□ 0.24
CAPN1-208ENST00000527323 LAS1LQ9Y4W2 734 aaKnown RBP16.54■□□□□ 0.24
CAPN1-208ENST00000527323 KIDINS220Q9ULH0 1771 aa16.54■□□□□ 0.24
CAPN1-208ENST00000527323 CCDC144AA2RUR9 1427 aa16.54■□□□□ 0.24
CAPN1-208ENST00000527323 UGGT1Q9NYU2 1555 aa16.54■□□□□ 0.24
CAPN1-208ENST00000527323 PLA2R1Q13018 1463 aa16.54■□□□□ 0.24
CAPN1-208ENST00000527323 RALGAPBQ86X10 1494 aa16.54■□□□□ 0.24
CAPN1-208ENST00000527323 CDCA7LQ96GN5 454 aa16.54■□□□□ 0.24
CAPN1-208ENST00000527323 UHRF1BP1Q6BDS2 1440 aa16.54■□□□□ 0.24
CAPN1-208ENST00000527323 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
CAPN1-208ENST00000527323 PDE3BQ13370 1112 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms