RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 USP47Q96K76 1375 aa16.34■□□□□ 0.21
CHMP1B-201ENST00000526991 ADGRL2O95490 1459 aa16.34■□□□□ 0.21
CHMP1B-201ENST00000526991 ADGBQ8N7X0 1667 aa16.34■□□□□ 0.21
CHMP1B-201ENST00000526991 CROCC2H7BZ55 1655 aa16.33■□□□□ 0.2
CHMP1B-201ENST00000526991 ZCCHC11Q5TAX3 1644 aaKnown RBP16.32■□□□□ 0.2
CHMP1B-201ENST00000526991 NBPF1Q3BBV0 1214 aa16.32■□□□□ 0.2
CHMP1B-201ENST00000526991 SPAG9O60271 1321 aaKnown RBP16.32■□□□□ 0.2
CHMP1B-201ENST00000526991 SALL2Q9Y467 1007 aaPredicted RBP16.32■□□□□ 0.2
CHMP1B-201ENST00000526991 CLASP1Q7Z460 1538 aa16.31■□□□□ 0.2
CHMP1B-201ENST00000526991 ST20-MTHFSA0A0A6YYL1 179 aa16.31■□□□□ 0.2
CHMP1B-201ENST00000526991 NPM1P06748 294 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHMP1B-201ENST00000526991 PREX2Q70Z35 1606 aa16.3■□□□□ 0.2
CHMP1B-201ENST00000526991 SPATA31E1Q6ZUB1 1445 aa16.3■□□□□ 0.2
CHMP1B-201ENST00000526991 KIF3BO15066 747 aa16.29■□□□□ 0.2
CHMP1B-201ENST00000526991 CYB5RLQ6IPT4 315 aa16.29■□□□□ 0.2
CHMP1B-201ENST00000526991 PLCH2O75038 1416 aa16.26■□□□□ 0.19
CHMP1B-201ENST00000526991 SCAPERQ9BY12 1400 aa16.26■□□□□ 0.19
CHMP1B-201ENST00000526991 RSPH4AQ5TD94 716 aa16.25■□□□□ 0.19
CHMP1B-201ENST00000526991 TMC1Q8TDI8 760 aa16.25■□□□□ 0.19
CHMP1B-201ENST00000526991 FAM135AQ9P2D6 1515 aa16.25■□□□□ 0.19
CHMP1B-201ENST00000526991 CCDC144AA2RUR9 1427 aa16.25■□□□□ 0.19
CHMP1B-201ENST00000526991 SHANK2Q9UPX8 1470 aa16.24■□□□□ 0.19
CHMP1B-201ENST00000526991 MYO5CQ9NQX4 1742 aa16.24■□□□□ 0.19
CHMP1B-201ENST00000526991 ZBED9Q6R2W3 1325 aa16.24■□□□□ 0.19
CHMP1B-201ENST00000526991 ROCK2O75116 1388 aaKnown RBP16.23■□□□□ 0.19
CHMP1B-201ENST00000526991 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
CHMP1B-201ENST00000526991 GGT6Q6P531 493 aa16.22■□□□□ 0.19
CHMP1B-201ENST00000526991 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
CHMP1B-201ENST00000526991 ASXL2Q76L83 1435 aa16.22■□□□□ 0.19
CHMP1B-201ENST00000526991 DHX29Q7Z478 1369 aaKnown RBP16.22■□□□□ 0.19
CHMP1B-201ENST00000526991 RAPGEF3O95398 923 aa16.21■□□□□ 0.19
CHMP1B-201ENST00000526991 MSH5O43196 834 aa16.2■□□□□ 0.18
CHMP1B-201ENST00000526991 ARHGEF5Q12774 1597 aa16.2■□□□□ 0.18
CHMP1B-201ENST00000526991 DAXXQ9UER7 740 aaPredicted RBP16.2■□□□□ 0.18
CHMP1B-201ENST00000526991 FANCAO15360 1455 aa16.19■□□□□ 0.18
CHMP1B-201ENST00000526991 WDR7Q9Y4E6 1490 aa16.19■□□□□ 0.18
CHMP1B-201ENST00000526991 NUTM2DQ5VT03 806 aaPredicted RBP16.18■□□□□ 0.18
CHMP1B-201ENST00000526991 BCORL1Q5H9F3 1711 aa16.18■□□□□ 0.18
CHMP1B-201ENST00000526991 PLA2R1Q13018 1463 aa16.18■□□□□ 0.18
CHMP1B-201ENST00000526991 ADGRL1O94910 1474 aa16.15■□□□□ 0.18
CHMP1B-201ENST00000526991 CFAP65Q6ZU64 1925 aaKnown RBP16.14■□□□□ 0.17
CHMP1B-201ENST00000526991 PNISRQ8TF01 805 aaKnown RBP16.14■□□□□ 0.17
CHMP1B-201ENST00000526991 CC2D1BQ5T0F9 858 aaKnown RBP16.14■□□□□ 0.17
CHMP1B-201ENST00000526991 UHRF1BP1LA0JNW5 1464 aa16.13■□□□□ 0.17
CHMP1B-201ENST00000526991 ABCC1P33527 1531 aa16.13■□□□□ 0.17
CHMP1B-201ENST00000526991 NUDCQ9Y266 331 aa16.11■□□□□ 0.17
CHMP1B-201ENST00000526991 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.09■□□□□ 0.17
CHMP1B-201ENST00000526991 A2MP01023 1474 aa16.09■□□□□ 0.17
CHMP1B-201ENST00000526991 DUOX2Q9NRD8 1548 aa16.09■□□□□ 0.17
CHMP1B-201ENST00000526991 KDM5CP41229 1560 aa16.08■□□□□ 0.16
CHMP1B-201ENST00000526991 PODXL2Q9NZ53 605 aa16.08■□□□□ 0.16
CHMP1B-201ENST00000526991 CD109Q6YHK3 1445 aa16.07■□□□□ 0.16
CHMP1B-201ENST00000526991 RALGAPBQ86X10 1494 aa16.06■□□□□ 0.16
CHMP1B-201ENST00000526991 UBE2Q2Q8WVN8 375 aa16.06■□□□□ 0.16
CHMP1B-201ENST00000526991 UGGT1Q9NYU2 1555 aa16.06■□□□□ 0.16
CHMP1B-201ENST00000526991 PRAG1Q86YV5 1406 aa16.05■□□□□ 0.16
CHMP1B-201ENST00000526991 KDM5DQ9BY66 1539 aa16.05■□□□□ 0.16
CHMP1B-201ENST00000526991 MYBBP1AQ9BQG0 1328 aaKnown RBP16.04■□□□□ 0.16
CHMP1B-201ENST00000526991 CFAP70Q5T0N1 1121 aa16.04■□□□□ 0.16
CHMP1B-201ENST00000526991 ERICH6BQ5W0A0 696 aa16.04■□□□□ 0.16
CHMP1B-201ENST00000526991 UHRF1BP1Q6BDS2 1440 aa16.04■□□□□ 0.16
CHMP1B-201ENST00000526991 ZFYVE16Q7Z3T8 1539 aa16.03■□□□□ 0.16
CHMP1B-201ENST00000526991 SMG6Q86US8 1419 aaKnown RBP16.03■□□□□ 0.16
CHMP1B-201ENST00000526991 ERBINQ96RT1 1412 aa16.03■□□□□ 0.16
CHMP1B-201ENST00000526991 CDCA7LQ96GN5 454 aa16.03■□□□□ 0.16
CHMP1B-201ENST00000526991 PANK3Q9H999 370 aa16.03■□□□□ 0.16
CHMP1B-201ENST00000526991 DISP3Q9P2K9 1392 aa16.03■□□□□ 0.16
CHMP1B-201ENST00000526991 MLECQ14165 292 aa16.02■□□□□ 0.16
CHMP1B-201ENST00000526991 ATP7AQ04656 1500 aa16.02■□□□□ 0.15
CHMP1B-201ENST00000526991 FAM69CQ0P6D2 419 aa16.01■□□□□ 0.15
CHMP1B-201ENST00000526991 ARID4BQ4LE39 1312 aaPredicted RBP16.01■□□□□ 0.15
CHMP1B-201ENST00000526991 KANK1Q14678 1352 aa16.01■□□□□ 0.15
CHMP1B-201ENST00000526991 WASHC2CQ9Y4E1 1318 aa16.01■□□□□ 0.15
CHMP1B-201ENST00000526991 PLXNC1O60486 1568 aa16■□□□□ 0.15
CHMP1B-201ENST00000526991 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
CHMP1B-201ENST00000526991 RALBP1Q15311 655 aa16■□□□□ 0.15
CHMP1B-201ENST00000526991 ADGRF5Q8IZF2 1346 aa16■□□□□ 0.15
CHMP1B-201ENST00000526991 UNC13BO14795 1591 aa16■□□□□ 0.15
CHMP1B-201ENST00000526991 TMEM132EQ6IEE7 984 aa15.99■□□□□ 0.15
CHMP1B-201ENST00000526991 SAFB2Q14151 953 aaKnown RBP eCLIP15.99■□□□□ 0.15
CHMP1B-201ENST00000526991 PLIN1O60240 522 aa15.98■□□□□ 0.15
CHMP1B-201ENST00000526991 EXOC6Q8TAG9 804 aa15.98■□□□□ 0.15
CHMP1B-201ENST00000526991 TESK2Q96S53 571 aa15.98■□□□□ 0.15
CHMP1B-201ENST00000526991 KTN1Q86UP2 1357 aaKnown RBP15.98■□□□□ 0.15
CHMP1B-201ENST00000526991 FANCIQ9NVI1 1328 aa15.98■□□□□ 0.15
CHMP1B-201ENST00000526991 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
CHMP1B-201ENST00000526991 ATP10AO60312 1499 aa15.97■□□□□ 0.15
CHMP1B-201ENST00000526991 IQGAP3Q86VI3 1631 aa15.97■□□□□ 0.15
CHMP1B-201ENST00000526991 NLRP13Q86W25 1043 aa15.97■□□□□ 0.15
CHMP1B-201ENST00000526991 PKNOX2Q96KN3 472 aa15.96■□□□□ 0.15
CHMP1B-201ENST00000526991 POLR1AO95602 1720 aaPredicted RBP15.96■□□□□ 0.15
CHMP1B-201ENST00000526991 E9PCH4 1651 aa15.96■□□□□ 0.15
CHMP1B-201ENST00000526991 PER1O15534 1290 aaPredicted RBP15.96■□□□□ 0.14
CHMP1B-201ENST00000526991 TRAK1Q9UPV9 953 aa15.96■□□□□ 0.14
CHMP1B-201ENST00000526991 ABCA9Q8IUA7 1624 aa15.95■□□□□ 0.14
CHMP1B-201ENST00000526991 BRD4O60885 1362 aaPredicted RBP15.95■□□□□ 0.14
CHMP1B-201ENST00000526991 RCAN3Q9UKA8 241 aa15.95■□□□□ 0.14
CHMP1B-201ENST00000526991 SKAP1Q86WV1 359 aa15.94■□□□□ 0.14
CHMP1B-201ENST00000526991 TMF1P82094 1093 aa15.94■□□□□ 0.14
CHMP1B-201ENST00000526991 NPM2Q86SE8 214 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms