RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 BCL2L12Q9HB09 334 aa9.88□□□□□ -0.83
USP48-211ENST00000526044 DPYSL4O14531 572 aa9.86□□□□□ -0.83
USP48-211ENST00000526044 MRPL50Q8N5N7 158 aaKnown RBP9.85□□□□□ -0.83
USP48-211ENST00000526044 IFFO2Q5TF58 517 aa9.84□□□□□ -0.83
USP48-211ENST00000526044 EVI5O60447 810 aa9.83□□□□□ -0.84
USP48-211ENST00000526044 THSD4Q6ZMP0 1018 aa9.83□□□□□ -0.84
USP48-211ENST00000526044 WNT2BQ93097 391 aa9.83□□□□□ -0.84
USP48-211ENST00000526044 SPDYE16A6NNV3 312 aaPredicted RBP9.82□□□□□ -0.84
USP48-211ENST00000526044 IRX2Q9BZI1 471 aaPredicted RBP9.82□□□□□ -0.84
USP48-211ENST00000526044 NBPF3Q9H094 633 aa9.82□□□□□ -0.84
USP48-211ENST00000526044 FOSBP53539 338 aa9.81□□□□□ -0.84
USP48-211ENST00000526044 ANO8Q9HCE9 1232 aaPredicted RBP9.81□□□□□ -0.84
USP48-211ENST00000526044 BHMG1C9JSJ3 638 aaPredicted RBP9.8□□□□□ -0.84
USP48-211ENST00000526044 PDIA6Q15084 440 aa9.79□□□□□ -0.84
USP48-211ENST00000526044 ZDHHC16Q969W1 377 aa9.79□□□□□ -0.84
USP48-211ENST00000526044 ZBED2Q9BTP6 218 aa9.79□□□□□ -0.84
USP48-211ENST00000526044 JPH4Q96JJ6 628 aa9.78□□□□□ -0.84
USP48-211ENST00000526044 A0A0G2JS52 829 aa9.77□□□□□ -0.85
USP48-211ENST00000526044 ADAM33Q9BZ11 813 aa9.73□□□□□ -0.85
USP48-211ENST00000526044 ANKK1Q8NFD2 765 aa9.72□□□□□ -0.85
USP48-211ENST00000526044 SEMA3EO15041 775 aa9.71□□□□□ -0.86
USP48-211ENST00000526044 NBR1Q14596 966 aa9.71□□□□□ -0.86
USP48-211ENST00000526044 DDX12PQ92771 950 aa9.7□□□□□ -0.86
USP48-211ENST00000526044 PHF14O94880 888 aa9.69□□□□□ -0.86
USP48-211ENST00000526044 RABGEF1Q9UJ41 708 aa9.69□□□□□ -0.86
USP48-211ENST00000526044 GRXCR2A6NFK2 248 aa9.68□□□□□ -0.86
USP48-211ENST00000526044 PPP1R3GB7ZBB8 358 aa9.68□□□□□ -0.86
USP48-211ENST00000526044 TESPA1A2RU30 521 aaPredicted RBP9.67□□□□□ -0.86
USP48-211ENST00000526044 EPAS1Q99814 870 aa9.67□□□□□ -0.86
USP48-211ENST00000526044 PCDHGA10Q9Y5H3 936 aa9.67□□□□□ -0.86
USP48-211ENST00000526044 MLLT3P42568 568 aaPredicted RBP9.66□□□□□ -0.86
USP48-211ENST00000526044 SMYD5Q6GMV2 418 aa9.66□□□□□ -0.86
USP48-211ENST00000526044 TYW1BQ6NUM6 668 aa9.66□□□□□ -0.86
USP48-211ENST00000526044 FBXW7Q969H0 707 aa9.66□□□□□ -0.86
USP48-211ENST00000526044 NYAP1Q6ZVC0 841 aa9.65□□□□□ -0.86
USP48-211ENST00000526044 LAPTM4BQ86VI4 370 aa9.64□□□□□ -0.87
USP48-211ENST00000526044 BCANQ96GW7 911 aa9.64□□□□□ -0.87
USP48-211ENST00000526044 ITGBL1O95965 494 aaPredicted RBP9.63□□□□□ -0.87
USP48-211ENST00000526044 TULP1O00294 542 aaPredicted RBP9.62□□□□□ -0.87
USP48-211ENST00000526044 OSBPP22059 807 aa9.62□□□□□ -0.87
USP48-211ENST00000526044 PROX2Q3B8N5 592 aa9.62□□□□□ -0.87
USP48-211ENST00000526044 SOWAHBA6NEL2 793 aa9.61□□□□□ -0.87
USP48-211ENST00000526044 Q6ZNB5 142 aa9.61□□□□□ -0.87
USP48-211ENST00000526044 BCAMP50895 628 aa9.6□□□□□ -0.87
USP48-211ENST00000526044 ONECUT3O60422 494 aaPredicted RBP9.59□□□□□ -0.87
USP48-211ENST00000526044 KCNC4Q03721 635 aa9.59□□□□□ -0.87
USP48-211ENST00000526044 EN1Q05925 392 aaPredicted RBP9.59□□□□□ -0.87
USP48-211ENST00000526044 RBM33Q96EV2 1170 aaKnown RBP9.59□□□□□ -0.87
USP48-211ENST00000526044 ZFRQ96KR1 1074 aaKnown RBP9.59□□□□□ -0.87
USP48-211ENST00000526044 MAP3K7O43318 606 aa9.58□□□□□ -0.88
USP48-211ENST00000526044 COL9A1P20849 921 aa9.58□□□□□ -0.88
USP48-211ENST00000526044 KIAA1468Q9P260 1216 aa9.58□□□□□ -0.88
USP48-211ENST00000526044 C6orf132Q5T0Z8 1188 aa9.57□□□□□ -0.88
USP48-211ENST00000526044 PRIM1P49642 420 aaKnown RBP9.56□□□□□ -0.88
USP48-211ENST00000526044 LAPTM4AQ15012 233 aa9.54□□□□□ -0.88
USP48-211ENST00000526044 RBM26Q5T8P6 1007 aaKnown RBP9.54□□□□□ -0.88
USP48-211ENST00000526044 WBP1LQ9NX94 342 aa9.54□□□□□ -0.88
USP48-211ENST00000526044 TSR1Q2NL82 804 aaKnown RBP9.53□□□□□ -0.88
USP48-211ENST00000526044 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.53□□□□□ -0.88
USP48-211ENST00000526044 NUTM2FA1L443 756 aa9.52□□□□□ -0.89
USP48-211ENST00000526044 FAM98CQ17RN3 349 aaKnown RBP9.52□□□□□ -0.89
USP48-211ENST00000526044 LRCH3Q96II8 777 aa9.52□□□□□ -0.89
USP48-211ENST00000526044 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.52□□□□□ -0.89
USP48-211ENST00000526044 SEPT9Q9UHD8 586 aaPredicted RBP9.52□□□□□ -0.89
USP48-211ENST00000526044 TSR3Q9UJK0 312 aaKnown RBP9.52□□□□□ -0.89
USP48-211ENST00000526044 TRIM6-TRIM34B2RNG4 842 aa9.51□□□□□ -0.89
USP48-211ENST00000526044 CERKQ8TCT0 537 aa9.51□□□□□ -0.89
USP48-211ENST00000526044 LMOD2Q6P5Q4 547 aa9.49□□□□□ -0.89
USP48-211ENST00000526044 HPS5Q9UPZ3 1129 aa9.49□□□□□ -0.89
USP48-211ENST00000526044 CDHR5Q9HBB8 845 aa9.48□□□□□ -0.89
USP48-211ENST00000526044 PACS2Q86VP3 889 aa9.47□□□□□ -0.89
USP48-211ENST00000526044 GPIHBP1Q8IV16 184 aa9.47□□□□□ -0.89
USP48-211ENST00000526044 NPDC1Q9NQX5 325 aaPredicted RBP9.47□□□□□ -0.89
USP48-211ENST00000526044 FCHSD2O94868 740 aa9.46□□□□□ -0.9
USP48-211ENST00000526044 PTGDRQ13258 359 aa9.46□□□□□ -0.9
USP48-211ENST00000526044 PPP4CP60510 307 aa9.45□□□□□ -0.9
USP48-211ENST00000526044 GFRA3O60609 400 aa9.44□□□□□ -0.9
USP48-211ENST00000526044 PRSS12P56730 875 aa9.43□□□□□ -0.9
USP48-211ENST00000526044 CDCA7LQ96GN5 454 aa9.43□□□□□ -0.9
USP48-211ENST00000526044 HIC1Q14526 733 aa9.42□□□□□ -0.9
USP48-211ENST00000526044 RBM27Q9P2N5 1060 aaKnown RBP9.42□□□□□ -0.9
USP48-211ENST00000526044 TRAF7Q6Q0C0 670 aa9.41□□□□□ -0.9
USP48-211ENST00000526044 GPR37O15354 613 aa9.4□□□□□ -0.9
USP48-211ENST00000526044 GNPATO15228 680 aa9.39□□□□□ -0.91
USP48-211ENST00000526044 PADI6Q6TGC4 694 aa9.38□□□□□ -0.91
USP48-211ENST00000526044 TTC13Q8NBP0 860 aa9.38□□□□□ -0.91
USP48-211ENST00000526044 ZC3H15Q8WU90 426 aaKnown RBP9.38□□□□□ -0.91
USP48-211ENST00000526044 TSKSQ9UJT2 592 aa9.38□□□□□ -0.91
USP48-211ENST00000526044 HDGFP51858 240 aaKnown RBP9.37□□□□□ -0.91
USP48-211ENST00000526044 PRKD2Q9BZL6 878 aa9.37□□□□□ -0.91
USP48-211ENST00000526044 FAM198AQ9UFP1 575 aa9.36□□□□□ -0.91
USP48-211ENST00000526044 NRG2O14511 850 aaPredicted RBP9.35□□□□□ -0.91
USP48-211ENST00000526044 IL21Q9HBE4 155 aa9.35□□□□□ -0.91
USP48-211ENST00000526044 FECHP22830 423 aa9.34□□□□□ -0.91
USP48-211ENST00000526044 SAMD7Q7Z3H4 446 aa9.34□□□□□ -0.91
USP48-211ENST00000526044 NBPF26B4DH59 902 aa9.33□□□□□ -0.92
USP48-211ENST00000526044 ZMYND10O75800 440 aa9.33□□□□□ -0.92
USP48-211ENST00000526044 TJAP1Q5JTD0 557 aa9.33□□□□□ -0.92
USP48-211ENST00000526044 TATDN2Q93075 761 aa9.33□□□□□ -0.92
USP48-211ENST00000526044 V9GY48 417 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms