RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 SLBPQ14493 270 aaKnown RBP eCLIP6.61□□□□□ -1.353e-8■■■■■ 73
USP48-211ENST00000526044 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.65□□□□□ -1.189e-7■■■■■ 30.8
USP48-211ENST00000526044 SF3B4Q15427 424 aaKnown RBP eCLIP3.98□□□□□ -1.772e-6■■■■□ 23.6
USP48-211ENST00000526044 KHSRPQ92945 711 aaKnown RBP eCLIP10.35□□□□□ -0.752e-11■■■■□ 23.4
USP48-211ENST00000526044 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.01□□□□□ -0.653e-12■■■■□ 21.3
USP48-211ENST00000526044 SF3B1O75533 1304 aaKnown RBP eCLIP4.64□□□□□ -1.673e-6■■■■□ 20.7
USP48-211ENST00000526044 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.49□□□□□ -1.858e-7■■■□□ 17.1
USP48-211ENST00000526044 RBM22Q9NW64 420 aaKnown RBP eCLIP4.43□□□□□ -1.72e-10■■■□□ 17
USP48-211ENST00000526044 TIA1P31483 386 aaKnown RBP eCLIP4.11□□□□□ -1.753e-8■■■□□ 15.4
USP48-211ENST00000526044 QKIQ96PU8 341 aaKnown RBP eCLIP4.42□□□□□ -1.73e-10■■□□□ 13.7
USP48-211ENST00000526044 AQRO60306 1485 aaKnown RBP eCLIP7.17□□□□□ -1.262e-7■■□□□ 12
USP48-211ENST00000526044 U2AF2P26368 475 aaKnown RBP eCLIP4.97□□□□□ -1.611e-7■□□□□ 11.3
USP48-211ENST00000526044 U2AF1Q01081 240 aaKnown RBP eCLIP5.79□□□□□ -1.481e-7■□□□□ 11.3
USP48-211ENST00000526044 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.26□□□□□ -1.575e-11■□□□□ 10.5
USP48-211ENST00000526044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.05■□□□□ -09e-9■□□□□ 9.8
USP48-211ENST00000526044 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.1□□□□□ -1.112e-10■□□□□ 9.8
USP48-211ENST00000526044 PPIGQ13427 754 aaKnown RBP eCLIP4.73□□□□□ -1.653e-6■□□□□ 9.8
USP48-211ENST00000526044 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.67□□□□□ -1.663e-19■□□□□ 9.5
USP48-211ENST00000526044 ZNF622Q969S3 477 aaKnown RBP eCLIP5.39□□□□□ -1.553e-16■□□□□ 9.1
USP48-211ENST00000526044 YBX3P16989 372 aaKnown RBP eCLIP6.98□□□□□ -1.295e-9■□□□□ 9.1
USP48-211ENST00000526044 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.33□□□□□ -1.44e-7■□□□□ 9
Retrieved 21 of 21 RNA–protein pairs in 6.7 ms