RNA–Protein interactions for RNA: ENST00000525036.1

RB1-205, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 3

Gene RB1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-205ENST00000525036 MADDQ8WXG6 1647 aa23.48■■□□□ 1.35
RB1-205ENST00000525036 GCC2Q8IWJ2 1684 aa23.47■■□□□ 1.35
RB1-205ENST00000525036 RNF17Q9BXT8 1623 aaKnown RBP23.47■■□□□ 1.35
RB1-205ENST00000525036 SETD5Q9C0A6 1442 aa23.43■■□□□ 1.34
RB1-205ENST00000525036 DEPDC5O75140 1603 aa23.43■■□□□ 1.34
RB1-205ENST00000525036 CEBPAP49715 358 aaPredicted RBP23.43■■□□□ 1.34
RB1-205ENST00000525036 PLPPR3Q6T4P5 718 aa23.43■■□□□ 1.34
RB1-205ENST00000525036 WASHC2CQ9Y4E1 1318 aa23.42■■□□□ 1.34
RB1-205ENST00000525036 RIMS1Q86UR5 1692 aaKnown RBP23.41■■□□□ 1.34
RB1-205ENST00000525036 FER1L4A9Z1Z3 1794 aa23.41■■□□□ 1.34
RB1-205ENST00000525036 PRDM15P57071 1507 aaPredicted RBP23.4■■□□□ 1.34
RB1-205ENST00000525036 PPP6R1Q9UPN7 881 aa23.4■■□□□ 1.34
RB1-205ENST00000525036 CLTCQ00610 1675 aaKnown RBP23.39■■□□□ 1.34
RB1-205ENST00000525036 ESF1Q9H501 851 aaKnown RBP23.39■■□□□ 1.34
RB1-205ENST00000525036 RAB3GAP2Q9H2M9 1393 aa23.39■■□□□ 1.33
RB1-205ENST00000525036 ABCC3O15438 1527 aa23.39■■□□□ 1.33
RB1-205ENST00000525036 UNC13BO14795 1591 aa23.38■■□□□ 1.33
RB1-205ENST00000525036 NUP155O75694 1391 aa23.37■■□□□ 1.33
RB1-205ENST00000525036 PTPRMP28827 1452 aa23.37■■□□□ 1.33
RB1-205ENST00000525036 VWDEQ8N2E2 1590 aa23.37■■□□□ 1.33
RB1-205ENST00000525036 ZMYM3Q14202 1370 aa23.36■■□□□ 1.33
RB1-205ENST00000525036 KDM5DQ9BY66 1539 aa23.36■■□□□ 1.33
RB1-205ENST00000525036 TRIM52Q96A61 297 aa23.36■■□□□ 1.33
RB1-205ENST00000525036 PCGF6Q9BYE7 350 aa23.36■■□□□ 1.33
RB1-205ENST00000525036 CEP152O94986 1710 aa23.35■■□□□ 1.33
RB1-205ENST00000525036 KANK1Q14678 1352 aa23.34■■□□□ 1.33
RB1-205ENST00000525036 CNTLNQ9NXG0 1405 aa23.33■■□□□ 1.33
RB1-205ENST00000525036 FBXO31Q5XUX0 539 aaPredicted RBP23.32■■□□□ 1.32
RB1-205ENST00000525036 C3P01024 1663 aa23.29■■□□□ 1.32
RB1-205ENST00000525036 LMTK2Q8IWU2 1503 aa23.29■■□□□ 1.32
RB1-205ENST00000525036 FAM135AQ9P2D6 1515 aa23.29■■□□□ 1.32
RB1-205ENST00000525036 IQGAP3Q86VI3 1631 aa23.28■■□□□ 1.32
RB1-205ENST00000525036 PZPP20742 1482 aa23.28■■□□□ 1.32
RB1-205ENST00000525036 CAMSAP1Q5T5Y3 1602 aa23.28■■□□□ 1.32
RB1-205ENST00000525036 MROH2AA6NES4 1674 aa23.27■■□□□ 1.32
RB1-205ENST00000525036 ZC3H13Q5T200 1668 aaKnown RBP23.27■■□□□ 1.32
RB1-205ENST00000525036 NPATQ14207 1427 aa23.26■■□□□ 1.31
RB1-205ENST00000525036 HRCP23327 699 aa23.24■■□□□ 1.31
RB1-205ENST00000525036 EFCAB6Q5THR3 1501 aa23.23■■□□□ 1.31
RB1-205ENST00000525036 SLC4A1APQ9BWU0 796 aaKnown RBP23.23■■□□□ 1.31
RB1-205ENST00000525036 FOXD1Q16676 465 aa23.22■■□□□ 1.31
RB1-205ENST00000525036 ARHGAP31Q2M1Z3 1444 aa23.22■■□□□ 1.31
RB1-205ENST00000525036 MPHOSPH9Q99550 1183 aa23.22■■□□□ 1.31
RB1-205ENST00000525036 TET3O43151 1660 aa23.21■■□□□ 1.31
RB1-205ENST00000525036 PKD2Q13563 968 aa23.21■■□□□ 1.31
RB1-205ENST00000525036 E9PCH4 1651 aa23.19■■□□□ 1.3
RB1-205ENST00000525036 ERVK-7P63135 1459 aa23.17■■□□□ 1.3
RB1-205ENST00000525036 CFAP65Q6ZU64 1925 aaKnown RBP23.17■■□□□ 1.3
RB1-205ENST00000525036 AEBP2Q6ZN18 517 aaPredicted RBP23.16■■□□□ 1.3
RB1-205ENST00000525036 TNRQ92752 1358 aa23.14■■□□□ 1.29
RB1-205ENST00000525036 PREX1Q8TCU6 1659 aa23.13■■□□□ 1.29
RB1-205ENST00000525036 SPATA31D1Q6ZQQ2 1576 aa23.13■■□□□ 1.29
RB1-205ENST00000525036 NOS1P29475 1434 aa23.13■■□□□ 1.29
RB1-205ENST00000525036 RPRD2Q5VT52 1461 aaKnown RBP23.12■■□□□ 1.29
RB1-205ENST00000525036 ACIN1Q9UKV3 1341 aaKnown RBP23.11■■□□□ 1.29
RB1-205ENST00000525036 SYNMO15061 1565 aa23.11■■□□□ 1.29
RB1-205ENST00000525036 PLA2R1Q13018 1463 aa23.1■■□□□ 1.29
RB1-205ENST00000525036 UGGT1Q9NYU2 1555 aa23.08■■□□□ 1.28
RB1-205ENST00000525036 PTPRTO14522 1441 aa23.07■■□□□ 1.28
RB1-205ENST00000525036 IDI1Q13907 227 aa23.07■■□□□ 1.28
RB1-205ENST00000525036 MYO3AQ8NEV4 1616 aa23.04■■□□□ 1.28
RB1-205ENST00000525036 LMTK3Q96Q04 1460 aa23.03■■□□□ 1.28
RB1-205ENST00000525036 DHX57Q6P158 1386 aaKnown RBP23.03■■□□□ 1.28
RB1-205ENST00000525036 HSPA2P54652 639 aa23.03■■□□□ 1.28
RB1-205ENST00000525036 UHRF1BP1Q6BDS2 1440 aa23.02■■□□□ 1.28
RB1-205ENST00000525036 SETD1BQ9UPS6 1966 aaKnown RBP23.02■■□□□ 1.28
RB1-205ENST00000525036 SPHKAPQ2M3C7 1700 aa23.01■■□□□ 1.27
RB1-205ENST00000525036 SLC52A1Q9NWF4 448 aa22.99■■□□□ 1.27
RB1-205ENST00000525036 A2ML1A8K2U0 1454 aa22.99■■□□□ 1.27
RB1-205ENST00000525036 NLRP1Q9C000 1473 aa22.99■■□□□ 1.27
RB1-205ENST00000525036 ANKRD30BQ9BXX2 1392 aa22.99■■□□□ 1.27
RB1-205ENST00000525036 TRPM2O94759 1503 aa22.98■■□□□ 1.27
RB1-205ENST00000525036 CEP170BQ9Y4F5 1589 aaPredicted RBP22.98■■□□□ 1.27
RB1-205ENST00000525036 PIK3C2BO00750 1634 aa22.98■■□□□ 1.27
RB1-205ENST00000525036 CLTCL1P53675 1640 aa22.97■■□□□ 1.27
RB1-205ENST00000525036 CHGAP10645 457 aaKnown RBP22.95■■□□□ 1.26
RB1-205ENST00000525036 ZNF142P52746 1687 aaPredicted RBP22.94■■□□□ 1.26
RB1-205ENST00000525036 STAG3Q9UJ98 1225 aa22.92■■□□□ 1.26
RB1-205ENST00000525036 UBR1Q8IWV7 1749 aa22.91■■□□□ 1.26
RB1-205ENST00000525036 TMEM131LA2VDJ0 1609 aa22.9■■□□□ 1.26
RB1-205ENST00000525036 CCDC144AA2RUR9 1427 aa22.89■■□□□ 1.26
RB1-205ENST00000525036 THEMISQ8N1K5 641 aaPredicted RBP22.89■■□□□ 1.25
RB1-205ENST00000525036 SIN3AQ96ST3 1273 aa22.89■■□□□ 1.25
RB1-205ENST00000525036 ADGRB3O60242 1522 aa22.89■■□□□ 1.25
RB1-205ENST00000525036 MYO5BQ9ULV0 1848 aa22.86■■□□□ 1.25
RB1-205ENST00000525036 NCKAP5LQ9HCH0 1330 aa22.86■■□□□ 1.25
RB1-205ENST00000525036 LTKP29376 864 aa22.85■■□□□ 1.25
RB1-205ENST00000525036 RGL3Q3MIN7 710 aa22.85■■□□□ 1.25
RB1-205ENST00000525036 NUTM2DQ5VT03 806 aaPredicted RBP22.85■■□□□ 1.25
RB1-205ENST00000525036 TMEM2Q9UHN6 1383 aa22.84■■□□□ 1.25
RB1-205ENST00000525036 SPATA31E1Q6ZUB1 1445 aa22.82■■□□□ 1.24
RB1-205ENST00000525036 ZNF326Q5BKZ1 582 aaKnown RBP22.82■■□□□ 1.24
RB1-205ENST00000525036 SENP3Q9H4L4 574 aaPredicted RBP22.82■■□□□ 1.24
RB1-205ENST00000525036 ARHGAP23Q9P227 1491 aa22.82■■□□□ 1.24
RB1-205ENST00000525036 KDM5AP29375 1690 aaKnown RBP22.81■■□□□ 1.24
RB1-205ENST00000525036 NEUROD1Q13562 356 aa22.8■■□□□ 1.24
RB1-205ENST00000525036 TXNDC2Q86VQ3 553 aa22.79■■□□□ 1.24
RB1-205ENST00000525036 SLIT1O75093 1534 aa22.79■■□□□ 1.24
RB1-205ENST00000525036 ZFYVE9O95405 1425 aa22.79■■□□□ 1.24
RB1-205ENST00000525036 RIMS2Q9UQ26 1411 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms