RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 WDR97A6NE52 1622 aa9.4□□□□□ -0.9
CTNNA1-239ENST00000523685 TESPA1A2RU30 521 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-239ENST00000523685 DPYSL4O14531 572 aa9.39□□□□□ -0.91
CTNNA1-239ENST00000523685 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTNNA1-239ENST00000523685 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-239ENST00000523685 MAP3K9P80192 1104 aa9.36□□□□□ -0.91
CTNNA1-239ENST00000523685 SMYD5Q6GMV2 418 aa9.36□□□□□ -0.91
CTNNA1-239ENST00000523685 PBRM1Q86U86 1689 aa9.36□□□□□ -0.91
CTNNA1-239ENST00000523685 LMOD2Q6P5Q4 547 aa9.35□□□□□ -0.91
CTNNA1-239ENST00000523685 ABCA10Q8WWZ4 1543 aa9.35□□□□□ -0.91
CTNNA1-239ENST00000523685 WRNQ14191 1432 aaPredicted RBP eCLIP9.33□□□□□ -0.92
CTNNA1-239ENST00000523685 PDIA6Q15084 440 aa9.33□□□□□ -0.92
CTNNA1-239ENST00000523685 OXER1Q8TDS5 423 aa9.33□□□□□ -0.92
CTNNA1-239ENST00000523685 UPF1Q92900 1129 aaKnown RBP eCLIP9.33□□□□□ -0.92
CTNNA1-239ENST00000523685 ABCA5Q8WWZ7 1642 aa9.32□□□□□ -0.92
CTNNA1-239ENST00000523685 POTEB2H3BUK9 544 aa9.32□□□□□ -0.92
CTNNA1-239ENST00000523685 GRIN2AQ12879 1464 aa9.32□□□□□ -0.92
CTNNA1-239ENST00000523685 TBC1D12O60347 775 aa9.31□□□□□ -0.92
CTNNA1-239ENST00000523685 POTEJP0CG39 1038 aa9.31□□□□□ -0.92
CTNNA1-239ENST00000523685 ERCC6L2Q5T890 1561 aa9.31□□□□□ -0.92
CTNNA1-239ENST00000523685 SLC34A2O95436 690 aa9.29□□□□□ -0.92
CTNNA1-239ENST00000523685 MLLT3P42568 568 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-239ENST00000523685 PTCD2Q8WV60 388 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-239ENST00000523685 ADAMTS12P58397 1594 aa9.29□□□□□ -0.92
CTNNA1-239ENST00000523685 CEP170Q5SW79 1584 aa9.29□□□□□ -0.92
CTNNA1-239ENST00000523685 MAMSTRQ6ZN01 415 aa9.28□□□□□ -0.92
CTNNA1-239ENST00000523685 NUP160Q12769 1436 aa9.28□□□□□ -0.92
CTNNA1-239ENST00000523685 FHAD1B1AJZ9 1412 aa9.27□□□□□ -0.93
CTNNA1-239ENST00000523685 SCUBE2Q9NQ36 999 aa9.26□□□□□ -0.93
CTNNA1-239ENST00000523685 TOP2BQ02880 1626 aa9.25□□□□□ -0.93
CTNNA1-239ENST00000523685 EVI5O60447 810 aa9.25□□□□□ -0.93
CTNNA1-239ENST00000523685 SLAIN1Q8ND83 568 aa9.25□□□□□ -0.93
CTNNA1-239ENST00000523685 PRG4Q92954 1404 aaPredicted RBP9.24□□□□□ -0.93
CTNNA1-239ENST00000523685 GRXCR2A6NFK2 248 aa9.23□□□□□ -0.93
CTNNA1-239ENST00000523685 PTGER2P43116 358 aa9.23□□□□□ -0.93
CTNNA1-239ENST00000523685 ZC3H15Q8WU90 426 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-239ENST00000523685 JPH4Q96JJ6 628 aa9.23□□□□□ -0.93
CTNNA1-239ENST00000523685 BIVM-ERCC5R4GMW8 1640 aa9.23□□□□□ -0.93
CTNNA1-239ENST00000523685 ERICH3Q5RHP9 1530 aa9.22□□□□□ -0.93
CTNNA1-239ENST00000523685 ZNF316A6NFI3 1004 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-239ENST00000523685 RBM26Q5T8P6 1007 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-239ENST00000523685 ANO8Q9HCE9 1232 aaPredicted RBP9.21□□□□□ -0.94
CTNNA1-239ENST00000523685 PCDHGA4Q9Y5G9 962 aa9.21□□□□□ -0.94
CTNNA1-239ENST00000523685 SHROOM2Q13796 1616 aa9.2□□□□□ -0.94
CTNNA1-239ENST00000523685 FAM69CQ0P6D2 419 aa9.2□□□□□ -0.94
CTNNA1-239ENST00000523685 DOK7Q18PE1 504 aa9.2□□□□□ -0.94
CTNNA1-239ENST00000523685 DDX12PQ92771 950 aa9.2□□□□□ -0.94
CTNNA1-239ENST00000523685 TTBK1Q5TCY1 1321 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-239ENST00000523685 HOXB3P14651 431 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-239ENST00000523685 OSBPP22059 807 aa9.17□□□□□ -0.94
CTNNA1-239ENST00000523685 GPIHBP1Q8IV16 184 aa9.17□□□□□ -0.94
CTNNA1-239ENST00000523685 RIMBP2O15034 1052 aa9.16□□□□□ -0.94
CTNNA1-239ENST00000523685 ZMYND10O75800 440 aa9.16□□□□□ -0.94
CTNNA1-239ENST00000523685 PLSCR2Q9NRY7 297 aa9.16□□□□□ -0.94
CTNNA1-239ENST00000523685 RUSC2Q8N2Y8 1516 aa9.15□□□□□ -0.95
CTNNA1-239ENST00000523685 ZSWIM6Q9HCJ5 1215 aa9.14□□□□□ -0.95
CTNNA1-239ENST00000523685 KIF13AQ9H1H9 1805 aa9.13□□□□□ -0.95
CTNNA1-239ENST00000523685 KDM4FA0A1W2PPD8 638 aa9.13□□□□□ -0.95
CTNNA1-239ENST00000523685 NUTM2FA1L443 756 aa9.13□□□□□ -0.95
CTNNA1-239ENST00000523685 SNPHO15079 494 aa9.13□□□□□ -0.95
CTNNA1-239ENST00000523685 ARSIQ5FYB1 569 aa9.13□□□□□ -0.95
CTNNA1-239ENST00000523685 ZNF710Q8N1W2 664 aa9.13□□□□□ -0.95
CTNNA1-239ENST00000523685 ABCC10Q5T3U5 1492 aa9.13□□□□□ -0.95
CTNNA1-239ENST00000523685 IGF1RP08069 1367 aa9.12□□□□□ -0.95
CTNNA1-239ENST00000523685 PHF14O94880 888 aa9.12□□□□□ -0.95
CTNNA1-239ENST00000523685 BARGINQ6ZT62 677 aa9.12□□□□□ -0.95
CTNNA1-239ENST00000523685 EPAS1Q99814 870 aa9.12□□□□□ -0.95
CTNNA1-239ENST00000523685 KIF27Q86VH2 1401 aa9.12□□□□□ -0.95
CTNNA1-239ENST00000523685 LHX8Q68G74 356 aa9.11□□□□□ -0.95
CTNNA1-239ENST00000523685 GPR153Q6NV75 609 aa9.11□□□□□ -0.95
CTNNA1-239ENST00000523685 OTUD5Q96G74 571 aa9.11□□□□□ -0.95
CTNNA1-239ENST00000523685 KIAA0586Q9BVV6 1533 aa9.1□□□□□ -0.95
CTNNA1-239ENST00000523685 ADCY10Q96PN6 1610 aa9.1□□□□□ -0.95
CTNNA1-239ENST00000523685 NUDT7P0C024 238 aa9.1□□□□□ -0.95
CTNNA1-239ENST00000523685 KHSRPQ92945 711 aaKnown RBP eCLIP9.1□□□□□ -0.95
CTNNA1-239ENST00000523685 SLC24A3Q9HC58 644 aa9.1□□□□□ -0.95
CTNNA1-239ENST00000523685 PCDHGA10Q9Y5H3 936 aa9.1□□□□□ -0.95
CTNNA1-239ENST00000523685 MAPKBP1O60336 1514 aa9.1□□□□□ -0.95
CTNNA1-239ENST00000523685 DIP2BQ9P265 1576 aa9.09□□□□□ -0.95
CTNNA1-239ENST00000523685 PTPRGP23470 1445 aa9.09□□□□□ -0.95
CTNNA1-239ENST00000523685 PRIM1P49642 420 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-239ENST00000523685 TYW1BQ6NUM6 668 aa9.08□□□□□ -0.96
CTNNA1-239ENST00000523685 KRI1Q8N9T8 703 aaKnown RBP9.08□□□□□ -0.96
CTNNA1-239ENST00000523685 CARMIL1Q5VZK9 1371 aa9.08□□□□□ -0.96
CTNNA1-239ENST00000523685 GPR37O15354 613 aa9.07□□□□□ -0.96
CTNNA1-239ENST00000523685 FOSBP53539 338 aa9.07□□□□□ -0.96
CTNNA1-239ENST00000523685 EN1Q05925 392 aaPredicted RBP9.07□□□□□ -0.96
CTNNA1-239ENST00000523685 KDM6BO15054 1643 aa9.06□□□□□ -0.96
CTNNA1-239ENST00000523685 FCHSD2O94868 740 aa9.06□□□□□ -0.96
CTNNA1-239ENST00000523685 FBXW7Q969H0 707 aa9.06□□□□□ -0.96
CTNNA1-239ENST00000523685 RBM33Q96EV2 1170 aaKnown RBP9.06□□□□□ -0.96
CTNNA1-239ENST00000523685 CUL7Q14999 1698 aa9.06□□□□□ -0.96
CTNNA1-239ENST00000523685 TSPOAP1O95153 1857 aa9.05□□□□□ -0.96
CTNNA1-239ENST00000523685 TNIKQ9UKE5 1360 aa9.05□□□□□ -0.96
CTNNA1-239ENST00000523685 MAP3K7O43318 606 aa9.05□□□□□ -0.96
CTNNA1-239ENST00000523685 CARMIL2Q6F5E8 1435 aa9.05□□□□□ -0.96
CTNNA1-239ENST00000523685 HIC1Q14526 733 aa9.04□□□□□ -0.96
CTNNA1-239ENST00000523685 ZNF454Q8N9F8 522 aa9.04□□□□□ -0.96
CTNNA1-239ENST00000523685 AK7Q96M32 723 aa9.04□□□□□ -0.96
CTNNA1-239ENST00000523685 GNPATO15228 680 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms